FFCP PHASE1:Mm9::chr13:48974025..48974038,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1347 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:48974025..48974038,- | |||
|description=CAGE_peak_at_chr13:48974025..48974038,- | |description=CAGE_peak_at_chr13:48974025..48974038,- | ||
|id=chr13:48974025..48974038,- | |id=chr13:48974025..48974038,- | ||
|ontology_enrichment_celltype=CL:0000988!1.57e-08!32;CL:0002032!1.57e-08!32;CL:0000037!1.57e-08!32;CL:0000566!1.57e-08!32;CL:0000837!1.57e-08!32;CL:0002031!8.48e-08!25;CL:0000838!1.53e-07!12;CL:0000542!1.54e-07!13;CL:0000051!1.54e-07!13;CL:0000063!4.72e-07!66;CL:0000738!5.06e-07!17;CL:0002087!5.06e-07!17;CL:0000084!6.52e-07!11;CL:0000827!6.52e-07!11;CL:0000791!7.42e-07!9;CL:0000789!7.42e-07!9;CL:0002420!7.42e-07!9;CL:0002419!7.42e-07!9;CL:0000790!7.42e-07!9 | |ontology_enrichment_celltype=CL:0000988!1.57e-08!32;CL:0002032!1.57e-08!32;CL:0000037!1.57e-08!32;CL:0000566!1.57e-08!32;CL:0000837!1.57e-08!32;CL:0002031!8.48e-08!25;CL:0000838!1.53e-07!12;CL:0000542!1.54e-07!13;CL:0000051!1.54e-07!13;CL:0000063!4.72e-07!66;CL:0000738!5.06e-07!17;CL:0002087!5.06e-07!17;CL:0000084!6.52e-07!11;CL:0000827!6.52e-07!11;CL:0000791!7.42e-07!9;CL:0000789!7.42e-07!9;CL:0002420!7.42e-07!9;CL:0002419!7.42e-07!9;CL:0000790!7.42e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.01e-12,32;CL:0002032,2.01e-12,32;CL:0000037,2.01e-12,32;CL:0000837,2.01e-12,32;CL:0000791,3.19e-12,9;CL:0000789,3.19e-12,9;CL:0002420,3.19e-12,9;CL:0002419,3.19e-12,9;CL:0000790,3.19e-12,9;CL:0002031,4.72e-11,25;CL:0000624,5.52e-11,8;CL:0000838,9.24e-11,12;CL:0000542,1.03e-09,13;CL:0000051,1.03e-09,13;CL:0000084,1.49e-09,11;CL:0000827,1.49e-09,11;CL:0002320,9.11e-09,46;CL:0000134,9.11e-09,46;CL:0002563,1.33e-08,9;CL:0002251,1.33e-08,9;CL:0000893,2.70e-08,6;CL:0002489,2.70e-08,6;CL:0000898,2.70e-08,6;CL:0000809,2.70e-08,6;CL:0000810,2.70e-08,6;CL:0000895,2.70e-08,6;CL:0000808,2.70e-08,6;CL:0000894,2.70e-08,6;CL:0000806,2.70e-08,6;CL:0000807,2.70e-08,6;CL:0000805,2.70e-08,6;CL:0002425,2.70e-08,6;CL:0002436,2.70e-08,6;CL:0002427,2.70e-08,6;CL:0002428,2.70e-08,6;CL:0002429,2.70e-08,6;CL:0002433,2.70e-08,6;CL:0002431,2.70e-08,6;CL:0002432,2.70e-08,6;CL:0000738,3.57e-08,17;CL:0002087,3.57e-08,17;CL:0000239,2.13e-07,6;CL:0000677,2.13e-07,6;CL:0000584,2.13e-07,6;CL:0000034,7.59e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!3.67e-08!66;UBERON:0003929!5.27e-07!55;UBERON:0005911!6.07e-07!69 | |ontology_enrichment_uberon=UBERON:0000490!3.67e-08!66;UBERON:0003929!5.27e-07!55;UBERON:0005911!6.07e-07!69 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000490,5.89e-11,66;UBERON:0003929,1.41e-10,55;UBERON:0002370,1.22e-09,23;UBERON:0000974,1.22e-09,23;UBERON:0004807,1.22e-09,23;UBERON:0005058,1.22e-09,23;UBERON:0003351,1.22e-09,23;UBERON:0009113,1.22e-09,23;UBERON:0003295,1.22e-09,23;UBERON:0009722,1.22e-09,23;UBERON:0005562,1.22e-09,23;UBERON:0007690,1.22e-09,23;UBERON:0006562,4.61e-09,24;UBERON:0003408,4.61e-09,24;UBERON:0001557,4.61e-09,24;UBERON:0001042,4.61e-09,24;UBERON:0008814,4.61e-09,24;UBERON:0009145,4.61e-09,24;UBERON:0002384,9.11e-09,46;UBERON:0003350,1.33e-08,9;UBERON:0004808,1.33e-08,9;UBERON:0001277,1.33e-08,9;UBERON:0000072,1.40e-08,27;UBERON:0005911,3.02e-08,69;UBERON:0004177,8.31e-07,29;UBERON:0005057,8.31e-07,29 | |||
|phase1_expression=0.640595388419176,2.79180326111489,1.36499771816861,4.23449895829562,1.50268718983904,1.84667199103079,1.40167584357315,12.7832090207161,12.67098499365,10.0647746318457,1.02730780935303,1.67521533890206,6.16322627752341,6.90621179110079,0.333109761815663,0,0,1.73504190947031,1.09691546884591,0.84877930359606,0.680346321208558,0.992909512008853,0.522399578277871,0.159992422793407,0,1.72269589234506,0,1.72376986148711,0,0.252030129759931,0,9.52546010189447,7.38077745101484,15.8481681015439,5.19932915552294,0.498703936075477,6.53341940039581,2.09265815368454,0,1.57057123192139,17.0587131528994,1.36609096991689,2.91306211818692,1.00717454380462,0.811015449756117,0.917733760808408,0,0,0.439372365468944,0.388859798148567,0.139986421625363,0,5.36904339384756,7.25362142011344,5.04140698713696,0,0.286533439938757,1.54701627683233,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0.599200221036809,0.768436610643109,0.414758449233911,0.405017814995072,0.210324961351382,0,0.220868540951614,0.367472397644862,0.0958454710182364,0,0,0.255374676170375,0.307213066512487,0,0.274462930807229,0,0.279182999001381,0,0.45839474333043,0.589257170947335,0.142371680799103,0.372798891650601,0.151452386666368,0.604572480854284,17.3918693221007,0,0.679971333707751,0,0.649776417447669,0.896053774194671,0.421333260395256,0.170430322578058,0.259786004602869,1.06001872353102,0.704217098883403,0,0,0,0,1.01343946190039,0,0.22836775943812,0.776813650941515,0.445326417194474,0.693941307064543,0,0.230615497256059,0.60289056221049,0.117588707135705,0.251333182659351,0.494389935468748,1.44599356919912,0,0.323533699894818,0,0.484875253135222,0,0.292780797011547,0.628340120440365,0,2.15667224110656,0,1.52484272487678,1.04853447583376,0.915001205637253,0.125654352112864,0.521472960576829,0.255715457330331,0.41557608911912,0.811206315338788,0.101839363850316,0.497627882440372,0.758168275301024,0.420883711772948,1.04096354370163,1.14951052216736,0.900310649026746,0,0.544291993210623,0.768682321709099,0.655912071918102,0.517406741478031,0.215567992932842,0.189106080167819,0.879755620819744,0,0.278047249225598,0.348252166522167,0,0.59710280045548,1.40442637462647,0.257347907114715,1.13665399758237,0.207125772535502,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.56748166682099,0.584799949701329,0,0.268412837520744,0.210289948564127,0.205809224758569,0,0,0.639864751605702,0.464473343720877,0.38660238396628,0,0,0.190225626112559,0.474529061544512,0,0,0,0.19496408711912,0,0.432276099749388,0.199141273254367,1.32767530667157,0.571242563048644,0,0.203651327845314,0.581857461502877,0.280543279561274,0.379419222745544,0.295220295959204,1.09899109488962,0.740382983530803,0.889357881261447,0.166845105716094,0.196558995113203,0,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,1.5601883655728,1.51547326768267,1.4351793081753,0.964887042726734,0,1.32643988239339,0.162964976442026,0.169745085775188,0.469380496577004,1.00503754465089,0.476087281772027,0.585400943573396,0.157635144106191,0.44292937929755,0.478364305972461,0.327726629431476,0.690739927463582,0.723245292907558,1.50791283939272,0,0,0,0.642202359951168,1.05490517932983,0.491804836130026,0.504941854408746,0.315508219416257,0,1.72338718186239,1.19484398976276,0.891194696329576,0.283076530788832,1.21443210502468,0.292255857911312,0.790575555893047,0,0.99358059645788,0.35613120733451,0.651547837414304,0.164970122972535,0,1.21390318077491,0,0,0.885905678642318,0,0,0,1.06949213515416,0,0,0,3.40439605753788,0.720244376125241,1.55230420539305,1.07168517515796,1.41872186913819,0.535106452806212,0.329098041204242,0.304464949114599,0.704015124191131,0.847328283455281,0,0.65954501176592,0,0.180938774784468,0.238744688006273,0.164140899745061,0.582961673259701,1.11255181206306,0.341741761595705,0,0.185194527369712,0.376736914009382,0.27338845544205,0.228778173206523,1.5298058699447,1.6794174278839,1.79659965945751,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0.129614973291793,0.621339313086926,0,0.299033092087958,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.352071715937262,0.781226309063701,0.209718688851422,1.93267296660805,0,4.4241556887945,0.405450430580328,0.616265742988964,0.389762468933385,1.25318686967237,1.19208812868759,1.80293174279953,0.886137163047463,2.62512769865184,0.838274873204998,1.20991422164209,1.55932609183604,2.88635524920988,3.85693777199178,0.906921534460845,0,0.269141569828427,0,0.579568782096571,0,0.183151624267265,0.214368379079066,0,0,0,0,0.515559547031063,0,0.755393897389701,1.35004500046361,0,0,0,0.415149390336707,0.399024873401031,0.853668028770671,0.243106717068294,0.209613162627982,0,0,0.412070114477788,0,0.252697211763798,0.50695859978048,0,0.280924522409647,0,0,0.952587382566147,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0,0,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.474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| |phase1_expression=0.640595388419176,2.79180326111489,1.36499771816861,4.23449895829562,1.50268718983904,1.84667199103079,1.40167584357315,12.7832090207161,12.67098499365,10.0647746318457,1.02730780935303,1.67521533890206,6.16322627752341,6.90621179110079,0.333109761815663,0,0,1.73504190947031,1.09691546884591,0.84877930359606,0.680346321208558,0.992909512008853,0.522399578277871,0.159992422793407,0,1.72269589234506,0,1.72376986148711,0,0.252030129759931,0,9.52546010189447,7.38077745101484,15.8481681015439,5.19932915552294,0.498703936075477,6.53341940039581,2.09265815368454,0,1.57057123192139,17.0587131528994,1.36609096991689,2.91306211818692,1.00717454380462,0.811015449756117,0.917733760808408,0,0,0.439372365468944,0.388859798148567,0.139986421625363,0,5.36904339384756,7.25362142011344,5.04140698713696,0,0.286533439938757,1.54701627683233,0.606949382578793,0,0.633831403506179,0,0,0,0,0,0.599200221036809,0.768436610643109,0.414758449233911,0.405017814995072,0.210324961351382,0,0.220868540951614,0.367472397644862,0.0958454710182364,0,0,0.255374676170375,0.307213066512487,0,0.274462930807229,0,0.279182999001381,0,0.45839474333043,0.589257170947335,0.142371680799103,0.372798891650601,0.151452386666368,0.604572480854284,17.3918693221007,0,0.679971333707751,0,0.649776417447669,0.896053774194671,0.421333260395256,0.170430322578058,0.259786004602869,1.06001872353102,0.704217098883403,0,0,0,0,1.01343946190039,0,0.22836775943812,0.776813650941515,0.445326417194474,0.693941307064543,0,0.230615497256059,0.60289056221049,0.117588707135705,0.251333182659351,0.494389935468748,1.44599356919912,0,0.323533699894818,0,0.484875253135222,0,0.292780797011547,0.628340120440365,0,2.15667224110656,0,1.52484272487678,1.04853447583376,0.915001205637253,0.125654352112864,0.521472960576829,0.255715457330331,0.41557608911912,0.811206315338788,0.101839363850316,0.497627882440372,0.758168275301024,0.420883711772948,1.04096354370163,1.14951052216736,0.900310649026746,0,0.544291993210623,0.768682321709099,0.655912071918102,0.517406741478031,0.215567992932842,0.189106080167819,0.879755620819744,0,0.278047249225598,0.348252166522167,0,0.59710280045548,1.40442637462647,0.257347907114715,1.13665399758237,0.207125772535502,0,0,0,0,0,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.56748166682099,0.584799949701329,0,0.268412837520744,0.210289948564127,0.205809224758569,0,0,0.639864751605702,0.464473343720877,0.38660238396628,0,0,0.190225626112559,0.474529061544512,0,0,0,0.19496408711912,0,0.432276099749388,0.199141273254367,1.32767530667157,0.571242563048644,0,0.203651327845314,0.581857461502877,0.280543279561274,0.379419222745544,0.295220295959204,1.09899109488962,0.740382983530803,0.889357881261447,0.166845105716094,0.196558995113203,0,0.202860121388503,0.482354319504834,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,1.5601883655728,1.51547326768267,1.4351793081753,0.964887042726734,0,1.32643988239339,0.162964976442026,0.169745085775188,0.469380496577004,1.00503754465089,0.476087281772027,0.585400943573396,0.157635144106191,0.44292937929755,0.478364305972461,0.327726629431476,0.690739927463582,0.723245292907558,1.50791283939272,0,0,0,0.642202359951168,1.05490517932983,0.491804836130026,0.504941854408746,0.315508219416257,0,1.72338718186239,1.19484398976276,0.891194696329576,0.283076530788832,1.21443210502468,0.292255857911312,0.790575555893047,0,0.99358059645788,0.35613120733451,0.651547837414304,0.164970122972535,0,1.21390318077491,0,0,0.885905678642318,0,0,0,1.06949213515416,0,0,0,3.40439605753788,0.720244376125241,1.55230420539305,1.07168517515796,1.41872186913819,0.535106452806212,0.329098041204242,0.304464949114599,0.704015124191131,0.847328283455281,0,0.65954501176592,0,0.180938774784468,0.238744688006273,0.164140899745061,0.582961673259701,1.11255181206306,0.341741761595705,0,0.185194527369712,0.376736914009382,0.27338845544205,0.228778173206523,1.5298058699447,1.6794174278839,1.79659965945751,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0.26175594198403,0.129614973291793,0.621339313086926,0,0.299033092087958,0.330916980914195,0.194451188344048,0.129159823477731,0.168956125490778,0.352071715937262,0.781226309063701,0.209718688851422,1.93267296660805,0,4.4241556887945,0.405450430580328,0.616265742988964,0.389762468933385,1.25318686967237,1.19208812868759,1.80293174279953,0.886137163047463,2.62512769865184,0.838274873204998,1.20991422164209,1.55932609183604,2.88635524920988,3.85693777199178,0.906921534460845,0,0.269141569828427,0,0.579568782096571,0,0.183151624267265,0.214368379079066,0,0,0,0,0.515559547031063,0,0.755393897389701,1.35004500046361,0,0,0,0.415149390336707,0.399024873401031,0.853668028770671,0.243106717068294,0.209613162627982,0,0,0.412070114477788,0,0.252697211763798,0.50695859978048,0,0.280924522409647,0,0,0.952587382566147,0.231768651889711,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.145346416632329,0,0,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.474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| ||
|short_description=p@chr13:48974025..48974038,- | |short_description=p@chr13:48974025..48974038,- | ||
}} | }} |
Latest revision as of 01:44, 6 August 2015
Short description: | p@chr13:48974025..48974038, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:48974025..48974038, - |
Coexpression cluster: | MCL_coexpression_mm9:1347 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
unilaminar epithelium | 5.89e-11 | 66 |
gut epithelium | 1.41e-10 | 55 |
thymus | 1.22e-09 | 23 |
neck | 1.22e-09 | 23 |
respiratory system epithelium | 1.22e-09 | 23 |
hemolymphoid system gland | 1.22e-09 | 23 |
pharyngeal epithelium | 1.22e-09 | 23 |
thymic region | 1.22e-09 | 23 |
pharyngeal gland | 1.22e-09 | 23 |
entire pharyngeal arch endoderm | 1.22e-09 | 23 |
thymus primordium | 1.22e-09 | 23 |
early pharyngeal endoderm | 1.22e-09 | 23 |
pharynx | 4.61e-09 | 24 |
gland of gut | 4.61e-09 | 24 |
upper respiratory tract | 4.61e-09 | 24 |
chordate pharynx | 4.61e-09 | 24 |
pharyngeal arch system | 4.61e-09 | 24 |
pharyngeal region of foregut | 4.61e-09 | 24 |
connective tissue | 9.11e-09 | 46 |
epithelium of mucosa | 1.33e-08 | 9 |
gastrointestinal system epithelium | 1.33e-08 | 9 |
intestinal epithelium | 1.33e-08 | 9 |
segment of respiratory tract | 1.40e-08 | 27 |
endo-epithelium | 3.02e-08 | 69 |
hemopoietic organ | 8.31e-07 | 29 |
immune organ | 8.31e-07 | 29 |