FFCP PHASE1:Mm9::chr18:66636209..66636215,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1993|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:66636209..66636215,-|id=chr18:66636209..66636215,-|ontology_enrichment_celltype=CL:0002563!1.63e-35!9;CL:0002251!1.63e-35!9;CL:0000239!6.83e-25!6;CL:0000677!6.83e-25!6;CL:0000212!6.83e-25!6;CL:0000584!6.83e-25!6;CL:0000066!1.47e-21!25;CL:0000075!2.90e-21!7;CL:0002076!9.08e-21!15;CL:0000223!3.16e-15!20;CL:0000063!1.73e-14!66;CL:0000473!4.98e-13!3;CL:0000627!4.98e-13!3;CL:0000682!4.98e-13!3;CL:0002250!3.60e-12!3;CL:0000548!5.52e-07!115;CL:0000004!5.52e-07!115;CL:0000255!5.52e-07!115;CL:0002371!9.99e-07!118|ontology_enrichment_celltype_v019_2=CL:0002563,1.00e-51,9;CL:0002251,1.00e-51,9;CL:0000239,1.20e-44,6;CL:0000677,1.20e-44,6;CL:0000584,1.20e-44,6;CL:0000075,2.84e-38,7;CL:0000066,9.03e-35,25;CL:0002076,6.80e-31,15;CL:0000223,4.63e-23,20;CL:0000682,1.10e-22,3;CL:0002250,2.21e-10,3;CL:0000473,4.33e-10,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.10e-42!15;UBERON:0001242!1.39e-35!13;UBERON:0000060!1.39e-35!13;UBERON:0001262!1.39e-35!13;UBERON:0004786!1.39e-35!13;UBERON:0003350!1.63e-35!9;UBERON:0004808!1.63e-35!9;UBERON:0001277!1.63e-35!9;UBERON:0000485!8.13e-29!11;UBERON:0004923!7.79e-26!24;UBERON:0000160!2.87e-11!43;UBERON:0001962!1.23e-08!2;UBERON:0001961!1.23e-08!2;UBERON:0001744!1.23e-08!2;UBERON:0005409!1.23e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.00e-51,9;UBERON:0004808,1.00e-51,9;UBERON:0001277,1.00e-51,9;UBERON:0000485,2.91e-42,11;UBERON:0001242,1.05e-35,13;UBERON:0001262,1.05e-35,13;UBERON:0004786,1.05e-35,13;UBERON:0000344,6.80e-31,15;UBERON:0004923,3.90e-19,24;UBERON:0000160,1.08e-14,31;UBERON:0005409,1.76e-09,47;UBERON:0003929,5.28e-08,55|phase1_expression=0,5.23463111459042,4.54999239389536,4.83942738090928,7.51343594919521,6.04365378882803,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0.319984845586813,0.91763712426868,4.59385571292016,5.1691439539089,3.66301095566011,0,0.252030129759931,0.221730510655305,0,0,0,3.46621943701529,0.166234645358492,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19980546198682,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:66636209..66636215,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1993 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:66636209..66636215,- | |||
|description=CAGE_peak_at_chr18:66636209..66636215,- | |||
|id=chr18:66636209..66636215,- | |||
|ontology_enrichment_celltype=CL:0002563!1.63e-35!9;CL:0002251!1.63e-35!9;CL:0000239!6.83e-25!6;CL:0000677!6.83e-25!6;CL:0000212!6.83e-25!6;CL:0000584!6.83e-25!6;CL:0000066!1.47e-21!25;CL:0000075!2.90e-21!7;CL:0002076!9.08e-21!15;CL:0000223!3.16e-15!20;CL:0000063!1.73e-14!66;CL:0000473!4.98e-13!3;CL:0000627!4.98e-13!3;CL:0000682!4.98e-13!3;CL:0002250!3.60e-12!3;CL:0000548!5.52e-07!115;CL:0000004!5.52e-07!115;CL:0000255!5.52e-07!115;CL:0002371!9.99e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.00e-51,9;CL:0002251,1.00e-51,9;CL:0000239,1.20e-44,6;CL:0000677,1.20e-44,6;CL:0000584,1.20e-44,6;CL:0000075,2.84e-38,7;CL:0000066,9.03e-35,25;CL:0002076,6.80e-31,15;CL:0000223,4.63e-23,20;CL:0000682,1.10e-22,3;CL:0002250,2.21e-10,3;CL:0000473,4.33e-10,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.10e-42!15;UBERON:0001242!1.39e-35!13;UBERON:0000060!1.39e-35!13;UBERON:0001262!1.39e-35!13;UBERON:0004786!1.39e-35!13;UBERON:0003350!1.63e-35!9;UBERON:0004808!1.63e-35!9;UBERON:0001277!1.63e-35!9;UBERON:0000485!8.13e-29!11;UBERON:0004923!7.79e-26!24;UBERON:0000160!2.87e-11!43;UBERON:0001962!1.23e-08!2;UBERON:0001961!1.23e-08!2;UBERON:0001744!1.23e-08!2;UBERON:0005409!1.23e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.00e-51,9;UBERON:0004808,1.00e-51,9;UBERON:0001277,1.00e-51,9;UBERON:0000485,2.91e-42,11;UBERON:0001242,1.05e-35,13;UBERON:0001262,1.05e-35,13;UBERON:0004786,1.05e-35,13;UBERON:0000344,6.80e-31,15;UBERON:0004923,3.90e-19,24;UBERON:0000160,1.08e-14,31;UBERON:0005409,1.76e-09,47;UBERON:0003929,5.28e-08,55 | |||
|phase1_expression=0,5.23463111459042,4.54999239389536,4.83942738090928,7.51343594919521,6.04365378882803,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0.319984845586813,0.91763712426868,4.59385571292016,5.1691439539089,3.66301095566011,0,0.252030129759931,0.221730510655305,0,0,0,3.46621943701529,0.166234645358492,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19980546198682,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:66636209..66636215,- | |||
}} |
Latest revision as of 01:27, 6 August 2015
Short description: | p@chr18:66636209..66636215, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:66636209..66636215, - |
Coexpression cluster: | MCL_coexpression_mm9:1993 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.00e-51 | 9 |
epithelial cell of alimentary canal | 1.00e-51 | 9 |
brush border epithelial cell | 1.20e-44 | 6 |
gut absorptive cell | 1.20e-44 | 6 |
enterocyte | 1.20e-44 | 6 |
columnar/cuboidal epithelial cell | 2.84e-38 | 7 |
epithelial cell | 9.03e-35 | 25 |
endo-epithelial cell | 6.80e-31 | 15 |
endodermal cell | 4.63e-23 | 20 |
M cell of gut | 1.10e-22 | 3 |
intestinal crypt stem cell | 2.21e-10 | 3 |
defensive cell | 4.33e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.00e-51 | 9 |
gastrointestinal system epithelium | 1.00e-51 | 9 |
intestinal epithelium | 1.00e-51 | 9 |
simple columnar epithelium | 2.91e-42 | 11 |
intestinal mucosa | 1.05e-35 | 13 |
wall of intestine | 1.05e-35 | 13 |
gastrointestinal system mucosa | 1.05e-35 | 13 |
mucosa | 6.80e-31 | 15 |
organ component layer | 3.90e-19 | 24 |
intestine | 1.08e-14 | 31 |
gastrointestinal system | 1.76e-09 | 47 |
gut epithelium | 5.28e-08 | 55 |