FFCP PHASE1:Mm9::chrX:136342792..136342806,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=61|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:136342792..136342806,+|id=chrX:136342792..136342806,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002250,3.89e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.84e-12!43;UBERON:0005409!2.95e-10!59;UBERON:0000344!4.41e-08!15|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.09e-29,31;UBERON:0005409,5.57e-23,47;UBERON:0000344,9.17e-10,15;UBERON:0002108,3.03e-09,4;UBERON:0001007,1.53e-08,116;UBERON:0001555,1.53e-08,116;UBERON:0007026,1.53e-08,116;UBERON:0004119,2.81e-08,118;UBERON:0000925,2.81e-08,118;UBERON:0006595,2.81e-08,118;UBERON:0004921,3.19e-07,114;UBERON:0000331,3.54e-07,3;UBERON:0002116,3.54e-07,3;UBERON:0001204,3.54e-07,3;UBERON:0001168,3.54e-07,3;UBERON:0001242,3.61e-07,13;UBERON:0001262,3.61e-07,13;UBERON:0004786,3.61e-07,13;UBERON:0004923,6.91e-07,24|phase1_expression=0,0.697950815278722,0,0,0.500895729946347,0.671517087647559,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,2.71987118748791,1.14704640533585,0.57423196411502,0.430761996159075,1.07735616342945,9.12112413390595,2.77233142735924,4.21287970245079,0,0,0,3.75507105676657,4.3221007793208,3.67504841272264,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0.173485326766136,0,0,0,0,0,11.6181634835156,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0.505445516867349,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08236303326152,0,0,1.67527699718721,8.26902450955704,9.56225588532942,20.5443676201564,7.59246498471219,15.317002789333,9.80207314321051,12.9321706826748,13.4525220112193,6.29173586057955,2.80979464837102,1.59313018603494,0,0,0,0.407302655690628,1.35766741017338,0.911765658574141,1.01178459398812,0.442830443938806,0.470996183524124,0.493588655687202,0,0,0,0,0,0.241177159752417,0,0,0,0.274561413188081,2.87536413054709,0,0.312037673114561,0.252578877947112,0.717589654087649,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.659880491890142,0,0,0,0,0,0,2.84271122485043,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0.356737635204141,0,0,0,0,0,0,0,0,0,0,12.5336759750836,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51207477150522,0.627264888043406,1.31017538247707,0,0.247960367176008,0,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41907650703115,0.924398614483445,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,1.03017528619447,0.64183841918363,1.01078884705519,1.2673964994512,0.754505365544305,1.03005658216871,0.640251524048693,0.574354689556133,1.90517476513229,0.463537303779422,1.35036454324594,0.824171801606613,0.441596760403192,1.02860775715625,1.06485483695602,1.43061713968393,0.872078499793971,0.846984423737976,0.846146078916765,0.548783918618318,1.05227884575137,1.08643291076689,0,0.237270036248348,0.394017929502254,0,0.464810523557898,0.385813221962283,0,0.935726433781634,1.93383948643468,0,0,0.231867835620421|short_description=p@chrX:136342792..136342806,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=61 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:136342792..136342806,+ | |||
|description=CAGE_peak_at_chrX:136342792..136342806,+ | |||
|id=chrX:136342792..136342806,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,3.89e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.84e-12!43;UBERON:0005409!2.95e-10!59;UBERON:0000344!4.41e-08!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.09e-29,31;UBERON:0005409,5.57e-23,47;UBERON:0000344,9.17e-10,15;UBERON:0002108,3.03e-09,4;UBERON:0001007,1.53e-08,116;UBERON:0001555,1.53e-08,116;UBERON:0007026,1.53e-08,116;UBERON:0004119,2.81e-08,118;UBERON:0000925,2.81e-08,118;UBERON:0006595,2.81e-08,118;UBERON:0004921,3.19e-07,114;UBERON:0000331,3.54e-07,3;UBERON:0002116,3.54e-07,3;UBERON:0001204,3.54e-07,3;UBERON:0001168,3.54e-07,3;UBERON:0001242,3.61e-07,13;UBERON:0001262,3.61e-07,13;UBERON:0004786,3.61e-07,13;UBERON:0004923,6.91e-07,24 | |||
|phase1_expression=0,0.697950815278722,0,0,0.500895729946347,0.671517087647559,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,2.71987118748791,1.14704640533585,0.57423196411502,0.430761996159075,1.07735616342945,9.12112413390595,2.77233142735924,4.21287970245079,0,0,0,3.75507105676657,4.3221007793208,3.67504841272264,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0.448026887097336,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0.173485326766136,0,0,0,0,0,11.6181634835156,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0.505445516867349,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08236303326152,0,0,1.67527699718721,8.26902450955704,9.56225588532942,20.5443676201564,7.59246498471219,15.317002789333,9.80207314321051,12.9321706826748,13.4525220112193,6.29173586057955,2.80979464837102,1.59313018603494,0,0,0,0.407302655690628,1.35766741017338,0.911765658574141,1.01178459398812,0.442830443938806,0.470996183524124,0.493588655687202,0,0,0,0,0,0.241177159752417,0,0,0,0.274561413188081,2.87536413054709,0,0.312037673114561,0.252578877947112,0.717589654087649,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.659880491890142,0,0,0,0,0,0,2.84271122485043,0.363533729477506,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0.356737635204141,0,0,0,0,0,0,0,0,0,0,12.5336759750836,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51207477150522,0.627264888043406,1.31017538247707,0,0.247960367176008,0,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41907650703115,0.924398614483445,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,1.03017528619447,0.64183841918363,1.01078884705519,1.2673964994512,0.754505365544305,1.03005658216871,0.640251524048693,0.574354689556133,1.90517476513229,0.463537303779422,1.35036454324594,0.824171801606613,0.441596760403192,1.02860775715625,1.06485483695602,1.43061713968393,0.872078499793971,0.846984423737976,0.846146078916765,0.548783918618318,1.05227884575137,1.08643291076689,0,0.237270036248348,0.394017929502254,0,0.464810523557898,0.385813221962283,0,0.935726433781634,1.93383948643468,0,0,0.231867835620421 | |||
|short_description=p@chrX:136342792..136342806,+ | |||
}} |
Latest revision as of 01:04, 6 August 2015
Short description: | p@chrX:136342792..136342806, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:136342792..136342806, + |
Coexpression cluster: | MCL_coexpression_mm9:61 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 3.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.09e-29 | 31 |
gastrointestinal system | 5.57e-23 | 47 |
mucosa | 9.17e-10 | 15 |
small intestine | 3.03e-09 | 4 |
digestive system | 1.53e-08 | 116 |
digestive tract | 1.53e-08 | 116 |
primitive gut | 1.53e-08 | 116 |
endoderm-derived structure | 2.81e-08 | 118 |
endoderm | 2.81e-08 | 118 |
presumptive endoderm | 2.81e-08 | 118 |
subdivision of digestive tract | 3.19e-07 | 114 |
ileal mucosa | 3.54e-07 | 3 |
ileum | 3.54e-07 | 3 |
mucosa of small intestine | 3.54e-07 | 3 |
wall of small intestine | 3.54e-07 | 3 |
intestinal mucosa | 3.61e-07 | 13 |
wall of intestine | 3.61e-07 | 13 |
gastrointestinal system mucosa | 3.61e-07 | 13 |
organ component layer | 6.91e-07 | 24 |