FFCP PHASE1:Mm9::chr18:64820812..64820837,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=410 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:64820812..64820837,+ | |||
|description=CAGE_peak_at_chr18:64820812..64820837,+ | |description=CAGE_peak_at_chr18:64820812..64820837,+ | ||
|id=chr18:64820812..64820837,+ | |id=chr18:64820812..64820837,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.71e-10!9;CL:0002251!1.71e-10!9;CL:0000239!8.65e-08!6;CL:0000677!8.65e-08!6;CL:0000212!8.65e-08!6;CL:0000584!8.65e-08!6 | |ontology_enrichment_celltype=CL:0002563!1.71e-10!9;CL:0002251!1.71e-10!9;CL:0000239!8.65e-08!6;CL:0000677!8.65e-08!6;CL:0000212!8.65e-08!6;CL:0000584!8.65e-08!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.78e-30,9;CL:0002251,6.78e-30,9;CL:0000066,1.40e-24,25;CL:0000239,2.64e-21,6;CL:0000677,2.64e-21,6;CL:0000584,2.64e-21,6;CL:0000223,7.84e-19,20;CL:0000075,3.49e-18,7;CL:0002076,2.26e-17,15;CL:0000682,1.72e-11,3;CL:0002250,3.59e-10,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.97e-21!59;UBERON:0000160!9.70e-18!43;UBERON:0000344!6.89e-17!15;UBERON:0004923!5.20e-15!24;UBERON:0001242!1.10e-14!13;UBERON:0000060!1.10e-14!13;UBERON:0001262!1.10e-14!13;UBERON:0004786!1.10e-14!13;UBERON:0004119!3.78e-13!130;UBERON:0000925!3.78e-13!130;UBERON:0006595!3.78e-13!130;UBERON:0001007!4.03e-12!128;UBERON:0001555!4.03e-12!128;UBERON:0007026!4.03e-12!128;UBERON:0004921!7.90e-11!126;UBERON:0004185!7.90e-11!126;UBERON:0003350!1.71e-10!9;UBERON:0004808!1.71e-10!9;UBERON:0001277!1.71e-10!9;UBERON:0000485!4.88e-08!11 | |ontology_enrichment_uberon=UBERON:0005409!1.97e-21!59;UBERON:0000160!9.70e-18!43;UBERON:0000344!6.89e-17!15;UBERON:0004923!5.20e-15!24;UBERON:0001242!1.10e-14!13;UBERON:0000060!1.10e-14!13;UBERON:0001262!1.10e-14!13;UBERON:0004786!1.10e-14!13;UBERON:0004119!3.78e-13!130;UBERON:0000925!3.78e-13!130;UBERON:0006595!3.78e-13!130;UBERON:0001007!4.03e-12!128;UBERON:0001555!4.03e-12!128;UBERON:0007026!4.03e-12!128;UBERON:0004921!7.90e-11!126;UBERON:0004185!7.90e-11!126;UBERON:0003350!1.71e-10!9;UBERON:0004808!1.71e-10!9;UBERON:0001277!1.71e-10!9;UBERON:0000485!4.88e-08!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.40e-44,15;UBERON:0001242,3.15e-37,13;UBERON:0001262,3.15e-37,13;UBERON:0004786,3.15e-37,13;UBERON:0004923,1.61e-30,24;UBERON:0003350,6.78e-30,9;UBERON:0004808,6.78e-30,9;UBERON:0001277,6.78e-30,9;UBERON:0000160,8.08e-26,31;UBERON:0000485,3.31e-24,11;UBERON:0005409,3.14e-18,47;UBERON:0000331,4.65e-12,3;UBERON:0002116,4.65e-12,3;UBERON:0001204,4.65e-12,3;UBERON:0001168,4.65e-12,3;UBERON:0004119,2.58e-10,118;UBERON:0000925,2.58e-10,118;UBERON:0006595,2.58e-10,118;UBERON:0001007,2.08e-09,116;UBERON:0001555,2.08e-09,116;UBERON:0007026,2.08e-09,116;UBERON:0002108,3.80e-09,4;UBERON:0001962,1.92e-08,2;UBERON:0001961,1.92e-08,2;UBERON:0001744,1.92e-08,2;UBERON:0004921,2.30e-07,114 | |||
|phase1_expression=0,3.48975407639361,5.0049916332849,3.93203474698879,7.01254021924886,4.53274034162102,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,4.47978783821539,9.1763712426868,5.16808767703518,2.58457197695445,5.17130958446134,4.56056206695297,7.05684363327806,10.4213340007993,0,0,0,2.3108129580102,1.32987716286794,1.02084678131185,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,1.3599426674155,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0,0,0,0.150722640552623,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0.991256348951394,2.90895623329899,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0,0.474529061544512,0.329397909448022,0.251335208800269,0,0,3.59527763461689,1.29682829924817,1.99141273254367,0,0,0,0.203651327845314,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0,0.274561413188081,0,0.744281895337007,0,0.252578877947112,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0.445597348164788,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.329940245945071,1.32745138339963,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,1.64270195644597,0.21183207086382,0.441056796109924,0.16488625294148,0.161464426695906,0,0.119372344003136,0,0.582961673259701,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.324016022465404,0.418176592028937,0.218362563746178,0.539457385539283,0.41326727862668,0.26175594198403,3.24037433229482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.965947970160952,0.750729901804728,0.549454872801795,0.428736758158132,0.501572104035363,0,0,0,0,0,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0.192075457214608,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,3.48975407639361,5.0049916332849,3.93203474698879,7.01254021924886,4.53274034162102,3.97141489012394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,4.47978783821539,9.1763712426868,5.16808767703518,2.58457197695445,5.17130958446134,4.56056206695297,7.05684363327806,10.4213340007993,0,0,0,2.3108129580102,1.32987716286794,1.02084678131185,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,1.3599426674155,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.258937883647172,0,0,0,0,0.150722640552623,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0.991256348951394,2.90895623329899,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0,0.474529061544512,0.329397909448022,0.251335208800269,0,0,3.59527763461689,1.29682829924817,1.99141273254367,0,0,0,0.203651327845314,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0,0.274561413188081,0,0.744281895337007,0,0.252578877947112,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0.445597348164788,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0.329940245945071,1.32745138339963,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,1.64270195644597,0.21183207086382,0.441056796109924,0.16488625294148,0.161464426695906,0,0.119372344003136,0,0.582961673259701,0,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.324016022465404,0.418176592028937,0.218362563746178,0.539457385539283,0.41326727862668,0.26175594198403,3.24037433229482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.965947970160952,0.750729901804728,0.549454872801795,0.428736758158132,0.501572104035363,0,0,0,0,0,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0.192075457214608,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr18:64820812..64820837,+ | |short_description=p@chr18:64820812..64820837,+ | ||
}} | }} |
Latest revision as of 00:32, 6 August 2015
Short description: | p@chr18:64820812..64820837, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:64820812..64820837, + |
Coexpression cluster: | MCL_coexpression_mm9:410 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.78e-30 | 9 |
epithelial cell of alimentary canal | 6.78e-30 | 9 |
epithelial cell | 1.40e-24 | 25 |
brush border epithelial cell | 2.64e-21 | 6 |
gut absorptive cell | 2.64e-21 | 6 |
enterocyte | 2.64e-21 | 6 |
endodermal cell | 7.84e-19 | 20 |
columnar/cuboidal epithelial cell | 3.49e-18 | 7 |
endo-epithelial cell | 2.26e-17 | 15 |
M cell of gut | 1.72e-11 | 3 |
intestinal crypt stem cell | 3.59e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.40e-44 | 15 |
intestinal mucosa | 3.15e-37 | 13 |
wall of intestine | 3.15e-37 | 13 |
gastrointestinal system mucosa | 3.15e-37 | 13 |
organ component layer | 1.61e-30 | 24 |
epithelium of mucosa | 6.78e-30 | 9 |
gastrointestinal system epithelium | 6.78e-30 | 9 |
intestinal epithelium | 6.78e-30 | 9 |
intestine | 8.08e-26 | 31 |
simple columnar epithelium | 3.31e-24 | 11 |
gastrointestinal system | 3.14e-18 | 47 |
ileal mucosa | 4.65e-12 | 3 |
ileum | 4.65e-12 | 3 |
mucosa of small intestine | 4.65e-12 | 3 |
wall of small intestine | 4.65e-12 | 3 |
endoderm-derived structure | 2.58e-10 | 118 |
endoderm | 2.58e-10 | 118 |
presumptive endoderm | 2.58e-10 | 118 |
digestive system | 2.08e-09 | 116 |
digestive tract | 2.08e-09 | 116 |
primitive gut | 2.08e-09 | 116 |
small intestine | 3.80e-09 | 4 |
gut-associated lymphoid tissue | 1.92e-08 | 2 |
mucosa-associated lymphoid tissue | 1.92e-08 | 2 |
lymphoid tissue | 1.92e-08 | 2 |
subdivision of digestive tract | 2.30e-07 | 114 |