FFCP PHASE1:Mm9::chr18:64501996..64502033,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=74|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:64501996..64502033,-|id=chr18:64501996..64502033,-|ontology_enrichment_celltype=CL:0002563!1.69e-17!9;CL:0002251!1.69e-17!9;CL:0000066!1.12e-15!25;CL:0000239!5.30e-13!6;CL:0000677!5.30e-13!6;CL:0000212!5.30e-13!6;CL:0000584!5.30e-13!6;CL:0000223!1.24e-12!20;CL:0000075!5.11e-11!7;CL:0002076!9.41e-10!15;CL:0000473!3.54e-07!3;CL:0000627!3.54e-07!3;CL:0000682!3.54e-07!3|ontology_enrichment_celltype_v019_2=CL:0000239,6.15e-17,6;CL:0000677,6.15e-17,6;CL:0000584,6.15e-17,6;CL:0000075,1.72e-14,7;CL:0000066,3.11e-14,25;CL:0000682,5.12e-12,3;CL:0002563,3.20e-11,9;CL:0002251,3.20e-11,9;CL:0000223,4.48e-09,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.99e-22!43;UBERON:0000344!2.64e-18!15;UBERON:0003350!1.69e-17!9;UBERON:0004808!1.69e-17!9;UBERON:0001277!1.69e-17!9;UBERON:0005409!1.48e-15!59;UBERON:0001007!8.51e-15!128;UBERON:0001555!8.51e-15!128;UBERON:0007026!8.51e-15!128;UBERON:0001242!1.34e-14!13;UBERON:0000060!1.34e-14!13;UBERON:0001262!1.34e-14!13;UBERON:0004786!1.34e-14!13;UBERON:0004119!1.97e-14!130;UBERON:0000925!1.97e-14!130;UBERON:0006595!1.97e-14!130;UBERON:0000485!5.66e-14!11;UBERON:0004921!7.83e-13!126;UBERON:0004185!7.83e-13!126;UBERON:0004923!2.36e-10!24;UBERON:0003929!4.63e-10!55;UBERON:0002107!7.32e-09!22;UBERON:0007499!7.32e-09!22;UBERON:0006925!7.32e-09!22;UBERON:0009497!7.32e-09!22;UBERON:0000015!7.32e-09!22;UBERON:0002423!7.32e-09!22;UBERON:0006235!7.32e-09!22;UBERON:0008835!7.32e-09!22;UBERON:0003894!7.32e-09!22;UBERON:0004161!7.32e-09!22;UBERON:0008836!7.32e-09!22;UBERON:0009854!2.25e-08!23;UBERON:0009856!2.25e-08!23;UBERON:0000490!1.37e-07!66;UBERON:0002365!1.61e-07!25;UBERON:0002330!1.61e-07!25;UBERON:0005911!4.65e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.94e-19,31;UBERON:0000344,2.15e-16,15;UBERON:0005409,6.55e-12,47;UBERON:0003350,3.20e-11,9;UBERON:0004808,3.20e-11,9;UBERON:0001277,3.20e-11,9;UBERON:0001242,5.79e-11,13;UBERON:0001262,5.79e-11,13;UBERON:0004786,5.79e-11,13;UBERON:0001007,3.13e-10,116;UBERON:0001555,3.13e-10,116;UBERON:0007026,3.13e-10,116;UBERON:0004119,5.35e-10,118;UBERON:0000925,5.35e-10,118;UBERON:0006595,5.35e-10,118;UBERON:0004923,8.13e-10,24;UBERON:0000485,3.89e-09,11;UBERON:0001962,6.59e-09,2;UBERON:0001961,6.59e-09,2;UBERON:0001744,6.59e-09,2;UBERON:0004921,5.16e-08,114|phase1_expression=0,6.2815573375085,5.0049916332849,3.62957053568196,2.50447864973174,1.34303417529512,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,1.60586496747019,1.72269589234506,2.58457197695445,1.29282739611533,0,0,0,0,0,0,0.577703239502549,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,2.59910566979068,1.34408066129201,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1730330641089,1.85115396664481,0,0,0,0,0.22237804384487,0.190225626112559,1.42358718463353,0.329397909448022,0.251335208800269,0.596869416123452,0.779856348476481,2.69645822596266,1.29682829924817,1.7922714592893,0,0,0,0,0,0,0,0,0,0,1.1858105083486,0,0,0,0,0,0,0.287696137450811,0.324270453550071,0,2.87536413054709,0,0.312037673114561,0.252578877947112,0.358794827043824,2.41221760681684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr18:64501996..64502033,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:64501996..64502033,- | |||
|description=CAGE_peak_at_chr18:64501996..64502033,- | |||
|id=chr18:64501996..64502033,- | |||
|ontology_enrichment_celltype=CL:0002563!1.69e-17!9;CL:0002251!1.69e-17!9;CL:0000066!1.12e-15!25;CL:0000239!5.30e-13!6;CL:0000677!5.30e-13!6;CL:0000212!5.30e-13!6;CL:0000584!5.30e-13!6;CL:0000223!1.24e-12!20;CL:0000075!5.11e-11!7;CL:0002076!9.41e-10!15;CL:0000473!3.54e-07!3;CL:0000627!3.54e-07!3;CL:0000682!3.54e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.15e-17,6;CL:0000677,6.15e-17,6;CL:0000584,6.15e-17,6;CL:0000075,1.72e-14,7;CL:0000066,3.11e-14,25;CL:0000682,5.12e-12,3;CL:0002563,3.20e-11,9;CL:0002251,3.20e-11,9;CL:0000223,4.48e-09,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.99e-22!43;UBERON:0000344!2.64e-18!15;UBERON:0003350!1.69e-17!9;UBERON:0004808!1.69e-17!9;UBERON:0001277!1.69e-17!9;UBERON:0005409!1.48e-15!59;UBERON:0001007!8.51e-15!128;UBERON:0001555!8.51e-15!128;UBERON:0007026!8.51e-15!128;UBERON:0001242!1.34e-14!13;UBERON:0000060!1.34e-14!13;UBERON:0001262!1.34e-14!13;UBERON:0004786!1.34e-14!13;UBERON:0004119!1.97e-14!130;UBERON:0000925!1.97e-14!130;UBERON:0006595!1.97e-14!130;UBERON:0000485!5.66e-14!11;UBERON:0004921!7.83e-13!126;UBERON:0004185!7.83e-13!126;UBERON:0004923!2.36e-10!24;UBERON:0003929!4.63e-10!55;UBERON:0002107!7.32e-09!22;UBERON:0007499!7.32e-09!22;UBERON:0006925!7.32e-09!22;UBERON:0009497!7.32e-09!22;UBERON:0000015!7.32e-09!22;UBERON:0002423!7.32e-09!22;UBERON:0006235!7.32e-09!22;UBERON:0008835!7.32e-09!22;UBERON:0003894!7.32e-09!22;UBERON:0004161!7.32e-09!22;UBERON:0008836!7.32e-09!22;UBERON:0009854!2.25e-08!23;UBERON:0009856!2.25e-08!23;UBERON:0000490!1.37e-07!66;UBERON:0002365!1.61e-07!25;UBERON:0002330!1.61e-07!25;UBERON:0005911!4.65e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.94e-19,31;UBERON:0000344,2.15e-16,15;UBERON:0005409,6.55e-12,47;UBERON:0003350,3.20e-11,9;UBERON:0004808,3.20e-11,9;UBERON:0001277,3.20e-11,9;UBERON:0001242,5.79e-11,13;UBERON:0001262,5.79e-11,13;UBERON:0004786,5.79e-11,13;UBERON:0001007,3.13e-10,116;UBERON:0001555,3.13e-10,116;UBERON:0007026,3.13e-10,116;UBERON:0004119,5.35e-10,118;UBERON:0000925,5.35e-10,118;UBERON:0006595,5.35e-10,118;UBERON:0004923,8.13e-10,24;UBERON:0000485,3.89e-09,11;UBERON:0001962,6.59e-09,2;UBERON:0001961,6.59e-09,2;UBERON:0001744,6.59e-09,2;UBERON:0004921,5.16e-08,114 | |||
|phase1_expression=0,6.2815573375085,5.0049916332849,3.62957053568196,2.50447864973174,1.34303417529512,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87986361028132,1.60586496747019,1.72269589234506,2.58457197695445,1.29282739611533,0,0,0,0,0,0,0.577703239502549,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,2.59910566979068,1.34408066129201,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1730330641089,1.85115396664481,0,0,0,0,0.22237804384487,0.190225626112559,1.42358718463353,0.329397909448022,0.251335208800269,0.596869416123452,0.779856348476481,2.69645822596266,1.29682829924817,1.7922714592893,0,0,0,0,0,0,0,0,0,0,1.1858105083486,0,0,0,0,0,0,0.287696137450811,0.324270453550071,0,2.87536413054709,0,0.312037673114561,0.252578877947112,0.358794827043824,2.41221760681684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:64501996..64502033,- | |||
}} |
Latest revision as of 00:24, 6 August 2015
Short description: | p@chr18:64501996..64502033, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:64501996..64502033, - |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.15e-17 | 6 |
gut absorptive cell | 6.15e-17 | 6 |
enterocyte | 6.15e-17 | 6 |
columnar/cuboidal epithelial cell | 1.72e-14 | 7 |
epithelial cell | 3.11e-14 | 25 |
M cell of gut | 5.12e-12 | 3 |
intestinal epithelial cell | 3.20e-11 | 9 |
epithelial cell of alimentary canal | 3.20e-11 | 9 |
endodermal cell | 4.48e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.94e-19 | 31 |
mucosa | 2.15e-16 | 15 |
gastrointestinal system | 6.55e-12 | 47 |
epithelium of mucosa | 3.20e-11 | 9 |
gastrointestinal system epithelium | 3.20e-11 | 9 |
intestinal epithelium | 3.20e-11 | 9 |
intestinal mucosa | 5.79e-11 | 13 |
wall of intestine | 5.79e-11 | 13 |
gastrointestinal system mucosa | 5.79e-11 | 13 |
digestive system | 3.13e-10 | 116 |
digestive tract | 3.13e-10 | 116 |
primitive gut | 3.13e-10 | 116 |
endoderm-derived structure | 5.35e-10 | 118 |
endoderm | 5.35e-10 | 118 |
presumptive endoderm | 5.35e-10 | 118 |
organ component layer | 8.13e-10 | 24 |
simple columnar epithelium | 3.89e-09 | 11 |
gut-associated lymphoid tissue | 6.59e-09 | 2 |
mucosa-associated lymphoid tissue | 6.59e-09 | 2 |
lymphoid tissue | 6.59e-09 | 2 |
subdivision of digestive tract | 5.16e-08 | 114 |