FFCP PHASE1:Mm9::chr18:61795043..61795050,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=410 | |MCL_coexpression_id=410 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:61795043..61795050,- | |||
|description=CAGE_peak_at_chr18:61795043..61795050,- | |description=CAGE_peak_at_chr18:61795043..61795050,- | ||
|id=chr18:61795043..61795050,- | |id=chr18:61795043..61795050,- | ||
|ontology_enrichment_celltype=CL:0002563!1.15e-24!9;CL:0002251!1.15e-24!9;CL:0000239!8.40e-17!6;CL:0000677!8.40e-17!6;CL:0000212!8.40e-17!6;CL:0000584!8.40e-17!6;CL:0000075!2.66e-14!7;CL:0002076!4.15e-14!15;CL:0000066!5.89e-14!25;CL:0000223!3.77e-10!20;CL:0002250!1.96e-09!3;CL:0000473!9.89e-09!3;CL:0000627!9.89e-09!3;CL:0000682!9.89e-09!3 | |ontology_enrichment_celltype=CL:0002563!1.15e-24!9;CL:0002251!1.15e-24!9;CL:0000239!8.40e-17!6;CL:0000677!8.40e-17!6;CL:0000212!8.40e-17!6;CL:0000584!8.40e-17!6;CL:0000075!2.66e-14!7;CL:0002076!4.15e-14!15;CL:0000066!5.89e-14!25;CL:0000223!3.77e-10!20;CL:0002250!1.96e-09!3;CL:0000473!9.89e-09!3;CL:0000627!9.89e-09!3;CL:0000682!9.89e-09!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.85e-36,9;CL:0002251,5.85e-36,9;CL:0000239,3.16e-24,6;CL:0000677,3.16e-24,6;CL:0000584,3.16e-24,6;CL:0000066,1.91e-21,25;CL:0002076,4.56e-21,15;CL:0000075,1.05e-20,7;CL:0000223,1.80e-15,20;CL:0002250,2.91e-13,3;CL:0000682,3.22e-12,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.60e-41!15;UBERON:0001242!2.56e-35!13;UBERON:0000060!2.56e-35!13;UBERON:0001262!2.56e-35!13;UBERON:0004786!2.56e-35!13;UBERON:0000160!1.18e-31!43;UBERON:0005409!8.51e-26!59;UBERON:0003350!1.15e-24!9;UBERON:0004808!1.15e-24!9;UBERON:0001277!1.15e-24!9;UBERON:0004923!3.28e-24!24;UBERON:0000485!7.22e-20!11;UBERON:0001007!4.12e-12!128;UBERON:0001555!4.12e-12!128;UBERON:0007026!4.12e-12!128;UBERON:0004119!7.84e-12!130;UBERON:0000925!7.84e-12!130;UBERON:0006595!7.84e-12!130;UBERON:0004921!4.72e-10!126;UBERON:0004185!4.72e-10!126;UBERON:0000331!1.03e-09!3;UBERON:0002116!1.03e-09!3;UBERON:0001204!1.03e-09!3;UBERON:0001168!1.03e-09!3;UBERON:0001962!5.90e-07!2;UBERON:0001961!5.90e-07!2;UBERON:0001744!5.90e-07!2 | |ontology_enrichment_uberon=UBERON:0000344!7.60e-41!15;UBERON:0001242!2.56e-35!13;UBERON:0000060!2.56e-35!13;UBERON:0001262!2.56e-35!13;UBERON:0004786!2.56e-35!13;UBERON:0000160!1.18e-31!43;UBERON:0005409!8.51e-26!59;UBERON:0003350!1.15e-24!9;UBERON:0004808!1.15e-24!9;UBERON:0001277!1.15e-24!9;UBERON:0004923!3.28e-24!24;UBERON:0000485!7.22e-20!11;UBERON:0001007!4.12e-12!128;UBERON:0001555!4.12e-12!128;UBERON:0007026!4.12e-12!128;UBERON:0004119!7.84e-12!130;UBERON:0000925!7.84e-12!130;UBERON:0006595!7.84e-12!130;UBERON:0004921!4.72e-10!126;UBERON:0004185!4.72e-10!126;UBERON:0000331!1.03e-09!3;UBERON:0002116!1.03e-09!3;UBERON:0001204!1.03e-09!3;UBERON:0001168!1.03e-09!3;UBERON:0001962!5.90e-07!2;UBERON:0001961!5.90e-07!2;UBERON:0001744!5.90e-07!2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.96e-60,15;UBERON:0001242,7.20e-52,13;UBERON:0001262,7.20e-52,13;UBERON:0004786,7.20e-52,13;UBERON:0004923,1.18e-36,24;UBERON:0003350,5.85e-36,9;UBERON:0004808,5.85e-36,9;UBERON:0001277,5.85e-36,9;UBERON:0000160,2.27e-35,31;UBERON:0000485,3.40e-29,11;UBERON:0005409,2.27e-22,47;UBERON:0000331,1.12e-13,3;UBERON:0002116,1.12e-13,3;UBERON:0001204,1.12e-13,3;UBERON:0001168,1.12e-13,3;UBERON:0002108,2.24e-10,4;UBERON:0001007,1.00e-09,116;UBERON:0001555,1.00e-09,116;UBERON:0007026,1.00e-09,116;UBERON:0001962,1.38e-09,2;UBERON:0001961,1.38e-09,2;UBERON:0001744,1.38e-09,2;UBERON:0004119,1.67e-09,118;UBERON:0000925,1.67e-09,118;UBERON:0006595,1.67e-09,118;UBERON:0004921,1.77e-07,114 | |||
|phase1_expression=0,3.83872948403297,5.91499011206397,4.83942738090928,2.00358291978539,2.35030980676646,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,6.42345986988076,2.29692785646008,1.29228598847722,2.15471232685889,4.3705386474966,3.02436155711917,9.3126814475228,0,0,0,4.04392267651784,3.82339684324532,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,2.3800550999719,0,0,0,0.201683524623343,0,0,2.37264530772256,0,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,1.08069024937347,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,3.83872948403297,5.91499011206397,4.83942738090928,2.00358291978539,2.35030980676646,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55987876469451,6.42345986988076,2.29692785646008,1.29228598847722,2.15471232685889,4.3705386474966,3.02436155711917,9.3126814475228,0,0,0,4.04392267651784,3.82339684324532,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,2.3800550999719,0,0,0,0.201683524623343,0,0,2.37264530772256,0,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,1.08069024937347,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:61795043..61795050,- | |short_description=p@chr18:61795043..61795050,- | ||
}} | }} |
Latest revision as of 23:50, 5 August 2015
Short description: | p@chr18:61795043..61795050, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:61795043..61795050, - |
Coexpression cluster: | MCL_coexpression_mm9:410 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.85e-36 | 9 |
epithelial cell of alimentary canal | 5.85e-36 | 9 |
brush border epithelial cell | 3.16e-24 | 6 |
gut absorptive cell | 3.16e-24 | 6 |
enterocyte | 3.16e-24 | 6 |
epithelial cell | 1.91e-21 | 25 |
endo-epithelial cell | 4.56e-21 | 15 |
columnar/cuboidal epithelial cell | 1.05e-20 | 7 |
endodermal cell | 1.80e-15 | 20 |
intestinal crypt stem cell | 2.91e-13 | 3 |
M cell of gut | 3.22e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.96e-60 | 15 |
intestinal mucosa | 7.20e-52 | 13 |
wall of intestine | 7.20e-52 | 13 |
gastrointestinal system mucosa | 7.20e-52 | 13 |
organ component layer | 1.18e-36 | 24 |
epithelium of mucosa | 5.85e-36 | 9 |
gastrointestinal system epithelium | 5.85e-36 | 9 |
intestinal epithelium | 5.85e-36 | 9 |
intestine | 2.27e-35 | 31 |
simple columnar epithelium | 3.40e-29 | 11 |
gastrointestinal system | 2.27e-22 | 47 |
ileal mucosa | 1.12e-13 | 3 |
ileum | 1.12e-13 | 3 |
mucosa of small intestine | 1.12e-13 | 3 |
wall of small intestine | 1.12e-13 | 3 |
small intestine | 2.24e-10 | 4 |
digestive system | 1.00e-09 | 116 |
digestive tract | 1.00e-09 | 116 |
primitive gut | 1.00e-09 | 116 |
gut-associated lymphoid tissue | 1.38e-09 | 2 |
mucosa-associated lymphoid tissue | 1.38e-09 | 2 |
lymphoid tissue | 1.38e-09 | 2 |
endoderm-derived structure | 1.67e-09 | 118 |
endoderm | 1.67e-09 | 118 |
presumptive endoderm | 1.67e-09 | 118 |
subdivision of digestive tract | 1.77e-07 | 114 |