FFCP PHASE1:Mm9::chr18:61173722..61173753,-: Difference between revisions
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{{FFCP|EntrezGene=240332|HGNC=|MCL_coexpression_id=1|UniProt=Q6PGE7|association_with_transcript=99bp_to_ENSMUST00000025520,NM_201353,uc008fbi.1_5end|description=CAGE_peak_2_at_Slc6a7_5end|id=chr18:61173722..61173753,-|ontology_enrichment_celltype=CL:0000117!3.83e-09!23;CL:0000337!3.83e-09!23;CL:0000540!1.19e-07!33;CL:0000047!1.19e-07!33;CL:0000031!1.19e-07!33;CL:0000404!1.19e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.54e-14,23;CL:0000337,1.54e-14,23;CL:0000540,7.89e-11,33;CL:0000047,7.89e-11,33;CL:0000031,7.89e-11,33;CL:0000404,7.89e-11,33;CL:0000393,2.32e-08,39;CL:0000211,2.32e-08,39;CL:0002319,4.04e-07,43;CL:0000221,7.56e-07,44;CL:0000133,7.56e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.18e-16!73;UBERON:0005743!8.18e-16!73;UBERON:0000073!7.82e-15!75;UBERON:0001016!7.82e-15!75;UBERON:0001049!1.08e-13!52;UBERON:0005068!1.08e-13!52;UBERON:0006241!1.08e-13!52;UBERON:0007135!1.08e-13!52;UBERON:0002020!1.62e-13!34;UBERON:0000955!4.33e-13!50;UBERON:0006238!4.33e-13!50;UBERON:0002616!2.29e-12!49;UBERON:0002791!1.90e-10!29;UBERON:0003528!1.90e-10!29;UBERON:0001893!1.90e-10!29;UBERON:0000033!8.26e-10!63;UBERON:0004121!2.60e-09!102;UBERON:0000924!2.60e-09!102;UBERON:0006601!2.60e-09!102;UBERON:0003080!3.93e-09!40;UBERON:0002021!9.96e-09!10;UBERON:0000411!9.96e-09!10;UBERON:0001950!9.96e-09!10;UBERON:0002346!1.29e-08!71;UBERON:0003075!1.29e-08!71;UBERON:0007284!1.29e-08!71;UBERON:0002780!1.74e-08!39;UBERON:0001890!1.74e-08!39;UBERON:0006240!1.74e-08!39;UBERON:0003056!7.80e-08!49;UBERON:0007811!2.43e-07!86;UBERON:0002420!6.00e-07!8;UBERON:0007245!6.00e-07!8;UBERON:0010009!6.00e-07!8;UBERON:0010011!6.00e-07!8;UBERON:0000454!6.00e-07!8;UBERON:0002619!8.09e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.01e-26,54;UBERON:0001017,8.52e-26,73;UBERON:0001016,9.05e-25,75;UBERON:0001049,2.50e-23,52;UBERON:0005068,2.50e-23,52;UBERON:0006241,2.50e-23,52;UBERON:0007135,2.50e-23,52;UBERON:0002020,1.46e-21,34;UBERON:0004121,4.22e-19,95;UBERON:0000924,4.22e-19,95;UBERON:0006601,4.22e-19,95;UBERON:0000955,1.57e-18,47;UBERON:0006238,1.57e-18,47;UBERON:0002346,2.60e-18,64;UBERON:0003075,2.60e-18,64;UBERON:0007284,2.60e-18,64;UBERON:0002616,2.48e-17,46;UBERON:0003528,2.83e-16,29;UBERON:0002791,2.83e-16,29;UBERON:0001893,2.83e-16,29;UBERON:0010371,7.32e-16,73;UBERON:0003080,1.16e-14,40;UBERON:0002021,5.08e-14,10;UBERON:0000411,5.08e-14,10;UBERON:0001950,5.08e-14,10;UBERON:0002780,1.53e-13,39;UBERON:0001890,1.53e-13,39;UBERON:0006240,1.53e-13,39;UBERON:0003056,8.61e-12,49;UBERON:0002420,6.16e-11,8;UBERON:0007245,6.16e-11,8;UBERON:0010009,6.16e-11,8;UBERON:0010011,6.16e-11,8;UBERON:0000454,6.16e-11,8;UBERON:0003076,7.63e-10,12;UBERON:0003057,7.63e-10,12;UBERON:0010314,1.03e-09,92;UBERON:0002619,7.28e-09,17;UBERON:0011216,8.76e-09,194;UBERON:0000956,3.99e-08,21;UBERON:0001869,3.99e-08,21;UBERON:0000203,3.99e-08,21;UBERON:0002240,5.54e-08,6;UBERON:0005174,5.54e-08,6;UBERON:0001137,5.54e-08,6;UBERON:0002950,3.37e-07,4;UBERON:0001891,3.37e-07,4;UBERON:0009616,3.37e-07,4;UBERON:0010286,3.37e-07,4;UBERON:0001948,6.15e-07,5;UBERON:0002315,6.15e-07,5;UBERON:0000369,8.30e-07,5;UBERON:0002435,8.30e-07,5;UBERON:0000204,8.30e-07,5;UBERON:0010082,8.30e-07,5|phase1_expression=0,0,0,0,0.500895729946347,1.34303417529512,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0.319984845586813,0.45881856213434,0,0,0.430942465371778,0,0.252030129759931,0.665191531965914,0,0,0,1.44425809875637,0.997407872150954,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,7.40587370980846,1.90149421051854,0,0,0,0,0,0,0.384218305321555,0,0,0,8.2838785477103,9.93908434282261,0.244981598429908,0.191690942036473,0,19.82085857989,18.0039146700115,13.8245879930619,4.48413378282659,5.12330804173494,5.2091337055676,11.4465029590566,14.069065250792,12.6822545654752,10.0173719061047,6.40672563595963,1.1183966749518,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0,0,0,0.722996784599558,0,0,0,0,0,1.75668478206928,2.30391377494801,2.55457055208591,0,0,0,16.3271796951257,7.77751024791665,1.7591609295801,13.210648334613,10.2286182932132,16.4152555202052,12.1680947300818,0.101839363850316,0,0,0.420883711772948,0,0,0,0,0.272145996605311,0,0.187403449119458,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,11.7762371195911,0.720332286654991,0.660837565967596,1.32225283331772,0,0,0.38660238396628,0.403367049246685,2.44615848229357,0.760902504450237,0.949058123089023,0.658795818896044,2.01068167040216,1.39269530428806,1.55971269695296,0.898819408654221,1.29682829924817,2.78797782556114,0.189667900953082,0,0,0.203651327845314,0,0.280543279561274,0.505892296994058,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2752377592187,8.79087649441524,0,0,0,0,0,0.716906393857656,1.11399337041197,1.41538265394416,0.404810701674894,0,0.395287777946524,17.3513510867776,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0.220528398054962,1.6488625294148,0,0,0,0.656563598980245,2.33184669303881,4.45020724825223,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0.26175594198403,0.259229946583586,0,0,0.299033092087958,0,0.194451188344048,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0.308132871494482,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0,0.201932899896295,0.0762068066549998,0.201652370273681,0.779663045918019,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,7.34177395402186,8.74617949363636,7.44764167471216,10.1393377582776,10.9613203163303,9.82012066606611,6.75022500231806,12.6089936902782,10.4222754066367,13.4617681055473,0,0,0.170733605754134,0,0,1.83843508450014,0.888986911206461,0.412070114477788,1.28367683836726,1.51618327058278,0.760437899670719,0.377252682772152,0.842773567228942,0.832326981263301,0.689225627467359,1.42888107384922,0.695305955669133,0.38581844092741,0,0.588795680537589,0.685738504770831,0.532427418478012,0.953744759789284,0.145346416632329,0.846984423737976,0.676916863133412,0.548783918618318,0.526139422875686,1.08643291076689,1.12228454331548,1.06771516311757,0.689531376628944,1.22769312950907,1.39443157067369,0.964533054905707,1.49886346762768,0.701794825336225,1.28922632428979,0.956441660344217,0.441182838239031,0|short_description=p2@Slc6a7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:240332 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6PGE7 | |||
|association_with_transcript=99bp_to_ENSMUST00000025520,NM_201353,uc008fbi.1_5end | |||
|cluster_id=chr18:61173722..61173753,- | |||
|description=CAGE_peak_2_at_Slc6a7_5end | |||
|id=chr18:61173722..61173753,- | |||
|ontology_enrichment_celltype=CL:0000117!3.83e-09!23;CL:0000337!3.83e-09!23;CL:0000540!1.19e-07!33;CL:0000047!1.19e-07!33;CL:0000031!1.19e-07!33;CL:0000404!1.19e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.54e-14,23;CL:0000337,1.54e-14,23;CL:0000540,7.89e-11,33;CL:0000047,7.89e-11,33;CL:0000031,7.89e-11,33;CL:0000404,7.89e-11,33;CL:0000393,2.32e-08,39;CL:0000211,2.32e-08,39;CL:0002319,4.04e-07,43;CL:0000221,7.56e-07,44;CL:0000133,7.56e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.18e-16!73;UBERON:0005743!8.18e-16!73;UBERON:0000073!7.82e-15!75;UBERON:0001016!7.82e-15!75;UBERON:0001049!1.08e-13!52;UBERON:0005068!1.08e-13!52;UBERON:0006241!1.08e-13!52;UBERON:0007135!1.08e-13!52;UBERON:0002020!1.62e-13!34;UBERON:0000955!4.33e-13!50;UBERON:0006238!4.33e-13!50;UBERON:0002616!2.29e-12!49;UBERON:0002791!1.90e-10!29;UBERON:0003528!1.90e-10!29;UBERON:0001893!1.90e-10!29;UBERON:0000033!8.26e-10!63;UBERON:0004121!2.60e-09!102;UBERON:0000924!2.60e-09!102;UBERON:0006601!2.60e-09!102;UBERON:0003080!3.93e-09!40;UBERON:0002021!9.96e-09!10;UBERON:0000411!9.96e-09!10;UBERON:0001950!9.96e-09!10;UBERON:0002346!1.29e-08!71;UBERON:0003075!1.29e-08!71;UBERON:0007284!1.29e-08!71;UBERON:0002780!1.74e-08!39;UBERON:0001890!1.74e-08!39;UBERON:0006240!1.74e-08!39;UBERON:0003056!7.80e-08!49;UBERON:0007811!2.43e-07!86;UBERON:0002420!6.00e-07!8;UBERON:0007245!6.00e-07!8;UBERON:0010009!6.00e-07!8;UBERON:0010011!6.00e-07!8;UBERON:0000454!6.00e-07!8;UBERON:0002619!8.09e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.01e-26,54;UBERON:0001017,8.52e-26,73;UBERON:0001016,9.05e-25,75;UBERON:0001049,2.50e-23,52;UBERON:0005068,2.50e-23,52;UBERON:0006241,2.50e-23,52;UBERON:0007135,2.50e-23,52;UBERON:0002020,1.46e-21,34;UBERON:0004121,4.22e-19,95;UBERON:0000924,4.22e-19,95;UBERON:0006601,4.22e-19,95;UBERON:0000955,1.57e-18,47;UBERON:0006238,1.57e-18,47;UBERON:0002346,2.60e-18,64;UBERON:0003075,2.60e-18,64;UBERON:0007284,2.60e-18,64;UBERON:0002616,2.48e-17,46;UBERON:0003528,2.83e-16,29;UBERON:0002791,2.83e-16,29;UBERON:0001893,2.83e-16,29;UBERON:0010371,7.32e-16,73;UBERON:0003080,1.16e-14,40;UBERON:0002021,5.08e-14,10;UBERON:0000411,5.08e-14,10;UBERON:0001950,5.08e-14,10;UBERON:0002780,1.53e-13,39;UBERON:0001890,1.53e-13,39;UBERON:0006240,1.53e-13,39;UBERON:0003056,8.61e-12,49;UBERON:0002420,6.16e-11,8;UBERON:0007245,6.16e-11,8;UBERON:0010009,6.16e-11,8;UBERON:0010011,6.16e-11,8;UBERON:0000454,6.16e-11,8;UBERON:0003076,7.63e-10,12;UBERON:0003057,7.63e-10,12;UBERON:0010314,1.03e-09,92;UBERON:0002619,7.28e-09,17;UBERON:0011216,8.76e-09,194;UBERON:0000956,3.99e-08,21;UBERON:0001869,3.99e-08,21;UBERON:0000203,3.99e-08,21;UBERON:0002240,5.54e-08,6;UBERON:0005174,5.54e-08,6;UBERON:0001137,5.54e-08,6;UBERON:0002950,3.37e-07,4;UBERON:0001891,3.37e-07,4;UBERON:0009616,3.37e-07,4;UBERON:0010286,3.37e-07,4;UBERON:0001948,6.15e-07,5;UBERON:0002315,6.15e-07,5;UBERON:0000369,8.30e-07,5;UBERON:0002435,8.30e-07,5;UBERON:0000204,8.30e-07,5;UBERON:0010082,8.30e-07,5 | |||
|phase1_expression=0,0,0,0,0.500895729946347,1.34303417529512,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0.319984845586813,0.45881856213434,0,0,0.430942465371778,0,0.252030129759931,0.665191531965914,0,0,0,1.44425809875637,0.997407872150954,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,7.40587370980846,1.90149421051854,0,0,0,0,0,0,0.384218305321555,0,0,0,8.2838785477103,9.93908434282261,0.244981598429908,0.191690942036473,0,19.82085857989,18.0039146700115,13.8245879930619,4.48413378282659,5.12330804173494,5.2091337055676,11.4465029590566,14.069065250792,12.6822545654752,10.0173719061047,6.40672563595963,1.1183966749518,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0,0,0,0.722996784599558,0,0,0,0,0,1.75668478206928,2.30391377494801,2.55457055208591,0,0,0,16.3271796951257,7.77751024791665,1.7591609295801,13.210648334613,10.2286182932132,16.4152555202052,12.1680947300818,0.101839363850316,0,0,0.420883711772948,0,0,0,0,0.272145996605311,0,0.187403449119458,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,11.7762371195911,0.720332286654991,0.660837565967596,1.32225283331772,0,0,0.38660238396628,0.403367049246685,2.44615848229357,0.760902504450237,0.949058123089023,0.658795818896044,2.01068167040216,1.39269530428806,1.55971269695296,0.898819408654221,1.29682829924817,2.78797782556114,0.189667900953082,0,0,0.203651327845314,0,0.280543279561274,0.505892296994058,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2752377592187,8.79087649441524,0,0,0,0,0,0.716906393857656,1.11399337041197,1.41538265394416,0.404810701674894,0,0.395287777946524,17.3513510867776,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0.304464949114599,0,0,0.220528398054962,1.6488625294148,0,0,0,0.656563598980245,2.33184669303881,4.45020724825223,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0.26175594198403,0.259229946583586,0,0,0.299033092087958,0,0.194451188344048,0,0,0,0.13020438484395,0.104859344425711,0,0,0,0,0.308132871494482,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0,0.201932899896295,0.0762068066549998,0.201652370273681,0.779663045918019,0.192423683280659,0.116876902181569,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,7.34177395402186,8.74617949363636,7.44764167471216,10.1393377582776,10.9613203163303,9.82012066606611,6.75022500231806,12.6089936902782,10.4222754066367,13.4617681055473,0,0,0.170733605754134,0,0,1.83843508450014,0.888986911206461,0.412070114477788,1.28367683836726,1.51618327058278,0.760437899670719,0.377252682772152,0.842773567228942,0.832326981263301,0.689225627467359,1.42888107384922,0.695305955669133,0.38581844092741,0,0.588795680537589,0.685738504770831,0.532427418478012,0.953744759789284,0.145346416632329,0.846984423737976,0.676916863133412,0.548783918618318,0.526139422875686,1.08643291076689,1.12228454331548,1.06771516311757,0.689531376628944,1.22769312950907,1.39443157067369,0.964533054905707,1.49886346762768,0.701794825336225,1.28922632428979,0.956441660344217,0.441182838239031,0 | |||
|short_description=p2@Slc6a7 | |||
}} |
Revision as of 23:20, 5 August 2015
Short description: | p2@Slc6a7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc6a7_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 99bp_to_ENSMUST00000025520, NM_201353, uc008fbi.1_5end |
EntrezGene: | 240332 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.54e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.54e-14 | 23 |
neuron | 7.89e-11 | 33 |
neuronal stem cell | 7.89e-11 | 33 |
neuroblast | 7.89e-11 | 33 |
electrically signaling cell | 7.89e-11 | 33 |
electrically responsive cell | 2.32e-08 | 39 |
electrically active cell | 2.32e-08 | 39 |
neural cell | 4.04e-07 | 43 |
ectodermal cell | 7.56e-07 | 44 |
neurectodermal cell | 7.56e-07 | 44 |