FFCP PHASE1:Mm9::chr1:72583270..72583295,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=251 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:72583270..72583295,+ | |||
|description=CAGE_peak_at_chr1:72583270..72583295,+ | |description=CAGE_peak_at_chr1:72583270..72583295,+ | ||
|id=chr1:72583270..72583295,+ | |id=chr1:72583270..72583295,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.15e-13!33;CL:0000047!2.15e-13!33;CL:0000031!2.15e-13!33;CL:0000404!2.15e-13!33;CL:0000117!3.18e-12!23;CL:0000337!3.18e-12!23;CL:0002319!1.16e-10!43;CL:0000221!1.17e-10!44;CL:0000133!1.17e-10!44;CL:0000393!1.67e-09!39;CL:0000211!1.67e-09!39;CL:0000055!1.76e-07!50 | |ontology_enrichment_celltype=CL:0000540!2.15e-13!33;CL:0000047!2.15e-13!33;CL:0000031!2.15e-13!33;CL:0000404!2.15e-13!33;CL:0000117!3.18e-12!23;CL:0000337!3.18e-12!23;CL:0002319!1.16e-10!43;CL:0000221!1.17e-10!44;CL:0000133!1.17e-10!44;CL:0000393!1.67e-09!39;CL:0000211!1.67e-09!39;CL:0000055!1.76e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.90e-16,33;CL:0000047,2.90e-16,33;CL:0000031,2.90e-16,33;CL:0000404,2.90e-16,33;CL:0000117,8.69e-16,23;CL:0000337,8.69e-16,23;CL:0000393,1.01e-12,39;CL:0000211,1.01e-12,39;CL:0002319,6.22e-11,43;CL:0000221,1.54e-10,44;CL:0000133,1.54e-10,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.38e-31!73;UBERON:0005743!2.38e-31!73;UBERON:0000073!1.17e-30!75;UBERON:0001016!1.17e-30!75;UBERON:0002346!1.57e-30!71;UBERON:0003075!1.57e-30!71;UBERON:0007284!1.57e-30!71;UBERON:0004121!5.08e-28!102;UBERON:0000924!5.08e-28!102;UBERON:0006601!5.08e-28!102;UBERON:0001049!2.34e-25!52;UBERON:0005068!2.34e-25!52;UBERON:0006241!2.34e-25!52;UBERON:0007135!2.34e-25!52;UBERON:0000955!2.54e-24!50;UBERON:0006238!2.54e-24!50;UBERON:0000033!1.39e-23!63;UBERON:0002616!2.08e-23!49;UBERON:0003056!9.47e-21!49;UBERON:0003080!3.60e-19!40;UBERON:0002780!2.53e-18!39;UBERON:0001890!2.53e-18!39;UBERON:0006240!2.53e-18!39;UBERON:0002020!6.07e-18!34;UBERON:0002791!1.15e-14!29;UBERON:0003528!1.15e-14!29;UBERON:0001893!1.15e-14!29;UBERON:0007811!8.35e-12!86;UBERON:0000153!3.95e-09!94;UBERON:0000956!4.32e-09!21;UBERON:0001869!4.32e-09!21;UBERON:0000203!4.32e-09!21;UBERON:0002021!1.20e-08!10;UBERON:0000411!1.20e-08!10;UBERON:0001950!1.20e-08!10;UBERON:0002619!1.28e-07!17;UBERON:0002420!3.54e-07!8;UBERON:0007245!3.54e-07!8;UBERON:0010009!3.54e-07!8;UBERON:0010011!3.54e-07!8;UBERON:0000454!3.54e-07!8;UBERON:0003076!9.53e-07!12;UBERON:0003057!9.53e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!2.38e-31!73;UBERON:0005743!2.38e-31!73;UBERON:0000073!1.17e-30!75;UBERON:0001016!1.17e-30!75;UBERON:0002346!1.57e-30!71;UBERON:0003075!1.57e-30!71;UBERON:0007284!1.57e-30!71;UBERON:0004121!5.08e-28!102;UBERON:0000924!5.08e-28!102;UBERON:0006601!5.08e-28!102;UBERON:0001049!2.34e-25!52;UBERON:0005068!2.34e-25!52;UBERON:0006241!2.34e-25!52;UBERON:0007135!2.34e-25!52;UBERON:0000955!2.54e-24!50;UBERON:0006238!2.54e-24!50;UBERON:0000033!1.39e-23!63;UBERON:0002616!2.08e-23!49;UBERON:0003056!9.47e-21!49;UBERON:0003080!3.60e-19!40;UBERON:0002780!2.53e-18!39;UBERON:0001890!2.53e-18!39;UBERON:0006240!2.53e-18!39;UBERON:0002020!6.07e-18!34;UBERON:0002791!1.15e-14!29;UBERON:0003528!1.15e-14!29;UBERON:0001893!1.15e-14!29;UBERON:0007811!8.35e-12!86;UBERON:0000153!3.95e-09!94;UBERON:0000956!4.32e-09!21;UBERON:0001869!4.32e-09!21;UBERON:0000203!4.32e-09!21;UBERON:0002021!1.20e-08!10;UBERON:0000411!1.20e-08!10;UBERON:0001950!1.20e-08!10;UBERON:0002619!1.28e-07!17;UBERON:0002420!3.54e-07!8;UBERON:0007245!3.54e-07!8;UBERON:0010009!3.54e-07!8;UBERON:0010011!3.54e-07!8;UBERON:0000454!3.54e-07!8;UBERON:0003076!9.53e-07!12;UBERON:0003057!9.53e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.11e-40,73;UBERON:0001016,3.37e-39,75;UBERON:0000073,1.37e-36,54;UBERON:0001049,5.78e-34,52;UBERON:0005068,5.78e-34,52;UBERON:0006241,5.78e-34,52;UBERON:0007135,5.78e-34,52;UBERON:0002346,1.95e-33,64;UBERON:0003075,1.95e-33,64;UBERON:0007284,1.95e-33,64;UBERON:0004121,1.34e-30,95;UBERON:0000924,1.34e-30,95;UBERON:0006601,1.34e-30,95;UBERON:0000955,1.97e-28,47;UBERON:0006238,1.97e-28,47;UBERON:0010371,1.11e-27,73;UBERON:0002616,5.21e-27,46;UBERON:0002020,4.54e-25,34;UBERON:0003080,4.88e-24,40;UBERON:0002780,1.08e-22,39;UBERON:0001890,1.08e-22,39;UBERON:0006240,1.08e-22,39;UBERON:0010314,1.63e-22,92;UBERON:0003056,8.32e-21,49;UBERON:0003528,1.36e-19,29;UBERON:0002791,1.36e-19,29;UBERON:0001893,1.36e-19,29;UBERON:0002021,7.22e-14,10;UBERON:0000411,7.22e-14,10;UBERON:0001950,7.22e-14,10;UBERON:0002420,2.54e-11,8;UBERON:0007245,2.54e-11,8;UBERON:0010009,2.54e-11,8;UBERON:0010011,2.54e-11,8;UBERON:0000454,2.54e-11,8;UBERON:0000956,1.40e-10,21;UBERON:0001869,1.40e-10,21;UBERON:0000203,1.40e-10,21;UBERON:0002619,3.57e-10,17;UBERON:0003076,3.77e-10,12;UBERON:0003057,3.77e-10,12;UBERON:0000025,6.25e-10,114;UBERON:0004111,1.44e-08,122;UBERON:0002240,4.18e-08,6;UBERON:0005174,4.18e-08,6;UBERON:0001137,4.18e-08,6;UBERON:0000369,2.22e-07,5;UBERON:0002435,2.22e-07,5;UBERON:0000204,2.22e-07,5;UBERON:0010082,2.22e-07,5;UBERON:0002950,5.84e-07,4;UBERON:0001891,5.84e-07,4;UBERON:0009616,5.84e-07,4;UBERON:0010286,5.84e-07,4;UBERON:0001948,7.07e-07,5;UBERON:0002315,7.07e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,3.64169629547276,5.28990979272033,1.90149421051854,0,0,0,0,0,0.599200221036809,0.384218305321555,1.14058573539325,0.540023753326763,0.420649922702764,2.85650984403804,5.52171352379034,0.61245399607477,0.0958454710182364,0,6.60695285996332,5.74593021383345,7.21950706304344,5.67111037239834,4.94033275453012,4.16730696445408,6.14202597803038,9.56696437053856,7.79271063661732,4.71405736757868,4.55589378557129,4.10078780815661,0,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.445326417194474,0.693941307064543,1.52232739156071,0,1.05505848386836,1.05829836422134,0.251333182659351,0,0,0,0,0,0,0,3.51336956413857,2.51336048176146,0,0,0,0,10.0359728401231,18.3000241127451,3.76963056338593,8.34356736922927,8.18289463457058,8.93488591606108,11.8436122039463,0,0,0,0.841767423545896,0,0.459804208866946,0.540186389416048,0.30140963567143,1.42876648217788,0.640568601424249,0.468508622798644,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,6.09840850835969,1.44066457330998,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0.345369963731791,0.867894351489069,0,0,0,0,8.99083303931635,7.2671245687166,0,0,1.89304931649754,2.73307121007647,3.23135096599198,0.238968797952552,0.222798674082394,0.566153061577665,0,2.04579100537918,1.58115111178609,21.8498495166829,0.709700426041343,0,0,1.97964147567043,0,0.728341908464944,0.302323556964751,0.565815239267694,0.885905678642318,0.614870295887855,0.516856586336442,1.09060118843252,0,0,0,0,6.46835250932197,0,0.388076051348264,0.857348140126369,0.354680467284547,1.60531935841864,1.31639216481697,2.74018454203139,0,0,0,0,0,0,0,0,0.291480836629851,6.48988557036784,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.648032044930808,0.418176592028937,0,0.404593039154462,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,7.90652579663893,3.68260189205742,8.02053718815155,4.64003592327956,6.85082519770642,11.3309084608455,5.40018000185445,4.05289082901798,7.25027854374727,8.80192529978094,0.31136204275253,1.19707462020309,0.341467211508268,0.729320151204882,0.209613162627982,1.10306105070008,1.77797382241292,1.03017528619447,0.962757628775446,1.01078884705519,0.760437899670719,0.565879024158229,0.655490552289177,0.704276676453562,0.976402972245426,0.476293691283074,0.579421629724277,0.77163688185482,0.824171801606613,0.588795680537589,1.02860775715625,0,0.238436189947321,1.16277133305863,0.752875043322645,0.507687647350059,0.73171189149109,1.05227884575137,0.814824683075171,0,1.06771516311757,0.788035859004508,0,0.309873682371932,0.964533054905707,1.24905288968973,0.935726433781634,1.07435527024149,0.57386499620653,0.441182838239031,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0,0,0,0,0,0,0,0,3.64169629547276,5.28990979272033,1.90149421051854,0,0,0,0,0,0.599200221036809,0.384218305321555,1.14058573539325,0.540023753326763,0.420649922702764,2.85650984403804,5.52171352379034,0.61245399607477,0.0958454710182364,0,6.60695285996332,5.74593021383345,7.21950706304344,5.67111037239834,4.94033275453012,4.16730696445408,6.14202597803038,9.56696437053856,7.79271063661732,4.71405736757868,4.55589378557129,4.10078780815661,0,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,0.445326417194474,0.693941307064543,1.52232739156071,0,1.05505848386836,1.05829836422134,0.251333182659351,0,0,0,0,0,0,0,3.51336956413857,2.51336048176146,0,0,0,0,10.0359728401231,18.3000241127451,3.76963056338593,8.34356736922927,8.18289463457058,8.93488591606108,11.8436122039463,0,0,0,0.841767423545896,0,0.459804208866946,0.540186389416048,0.30140963567143,1.42876648217788,0.640568601424249,0.468508622798644,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,6.09840850835969,1.44066457330998,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0.403367049246685,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0,0,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0.345369963731791,0.867894351489069,0,0,0,0,8.99083303931635,7.2671245687166,0,0,1.89304931649754,2.73307121007647,3.23135096599198,0.238968797952552,0.222798674082394,0.566153061577665,0,2.04579100537918,1.58115111178609,21.8498495166829,0.709700426041343,0,0,1.97964147567043,0,0.728341908464944,0.302323556964751,0.565815239267694,0.885905678642318,0.614870295887855,0.516856586336442,1.09060118843252,0,0,0,0,6.46835250932197,0,0.388076051348264,0.857348140126369,0.354680467284547,1.60531935841864,1.31639216481697,2.74018454203139,0,0,0,0,0,0,0,0,0.291480836629851,6.48988557036784,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,0.648032044930808,0.418176592028937,0,0.404593039154462,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,7.90652579663893,3.68260189205742,8.02053718815155,4.64003592327956,6.85082519770642,11.3309084608455,5.40018000185445,4.05289082901798,7.25027854374727,8.80192529978094,0.31136204275253,1.19707462020309,0.341467211508268,0.729320151204882,0.209613162627982,1.10306105070008,1.77797382241292,1.03017528619447,0.962757628775446,1.01078884705519,0.760437899670719,0.565879024158229,0.655490552289177,0.704276676453562,0.976402972245426,0.476293691283074,0.579421629724277,0.77163688185482,0.824171801606613,0.588795680537589,1.02860775715625,0,0.238436189947321,1.16277133305863,0.752875043322645,0.507687647350059,0.73171189149109,1.05227884575137,0.814824683075171,0,1.06771516311757,0.788035859004508,0,0.309873682371932,0.964533054905707,1.24905288968973,0.935726433781634,1.07435527024149,0.57386499620653,0.441182838239031,0 | ||
|short_description=p@chr1:72583270..72583295,+ | |short_description=p@chr1:72583270..72583295,+ | ||
}} | }} |
Latest revision as of 23:08, 5 August 2015
Short description: | p@chr1:72583270..72583295, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72583270..72583295, + |
Coexpression cluster: | MCL_coexpression_mm9:251 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.90e-16 | 33 |
neuronal stem cell | 2.90e-16 | 33 |
neuroblast | 2.90e-16 | 33 |
electrically signaling cell | 2.90e-16 | 33 |
CNS neuron (sensu Vertebrata) | 8.69e-16 | 23 |
neuroblast (sensu Vertebrata) | 8.69e-16 | 23 |
electrically responsive cell | 1.01e-12 | 39 |
electrically active cell | 1.01e-12 | 39 |
neural cell | 6.22e-11 | 43 |
ectodermal cell | 1.54e-10 | 44 |
neurectodermal cell | 1.54e-10 | 44 |