FFCP PHASE1:Mm9::chr13:30823618..30823626,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=375 | |MCL_coexpression_id=375 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-19bp_to_ENSMUST00000120583_5end | |association_with_transcript=-19bp_to_ENSMUST00000120583_5end | ||
|cluster_id=chr13:30823618..30823626,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000120583_5end | |description=CAGE_peak_1_at_ENSMUST00000120583_5end | ||
|id=chr13:30823618..30823626,+ | |id=chr13:30823618..30823626,+ | ||
|ontology_enrichment_celltype=CL:0000063!2.01e-12!66;CL:0000548!8.30e-09!115;CL:0000004!8.30e-09!115;CL:0000255!8.30e-09!115;CL:0002371!2.71e-08!118;CL:0000144!8.24e-08!121;CL:0000012!8.24e-08!121;CL:0000838!1.74e-07!12;CL:0002031!1.75e-07!25;CL:0000893!2.11e-07!6;CL:0002489!2.11e-07!6;CL:0000898!2.11e-07!6;CL:0000809!2.11e-07!6;CL:0000810!2.11e-07!6;CL:0000895!2.11e-07!6;CL:0000808!2.11e-07!6;CL:0000894!2.11e-07!6;CL:0000806!2.11e-07!6;CL:0000807!2.11e-07!6;CL:0000805!2.11e-07!6;CL:0002425!2.11e-07!6;CL:0002436!2.11e-07!6;CL:0002427!2.11e-07!6;CL:0002428!2.11e-07!6;CL:0002429!2.11e-07!6;CL:0002433!2.11e-07!6;CL:0002431!2.11e-07!6;CL:0002432!2.11e-07!6;CL:0002320!2.36e-07!46;CL:0000134!2.36e-07!46;CL:0000624!3.53e-07!8;CL:0000219!4.30e-07!54;CL:0000542!9.65e-07!13;CL:0000051!9.65e-07!13 | |ontology_enrichment_celltype=CL:0000063!2.01e-12!66;CL:0000548!8.30e-09!115;CL:0000004!8.30e-09!115;CL:0000255!8.30e-09!115;CL:0002371!2.71e-08!118;CL:0000144!8.24e-08!121;CL:0000012!8.24e-08!121;CL:0000838!1.74e-07!12;CL:0002031!1.75e-07!25;CL:0000893!2.11e-07!6;CL:0002489!2.11e-07!6;CL:0000898!2.11e-07!6;CL:0000809!2.11e-07!6;CL:0000810!2.11e-07!6;CL:0000895!2.11e-07!6;CL:0000808!2.11e-07!6;CL:0000894!2.11e-07!6;CL:0000806!2.11e-07!6;CL:0000807!2.11e-07!6;CL:0000805!2.11e-07!6;CL:0002425!2.11e-07!6;CL:0002436!2.11e-07!6;CL:0002427!2.11e-07!6;CL:0002428!2.11e-07!6;CL:0002429!2.11e-07!6;CL:0002433!2.11e-07!6;CL:0002431!2.11e-07!6;CL:0002432!2.11e-07!6;CL:0002320!2.36e-07!46;CL:0000134!2.36e-07!46;CL:0000624!3.53e-07!8;CL:0000219!4.30e-07!54;CL:0000542!9.65e-07!13;CL:0000051!9.65e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.01e-08,15;CL:0000239,2.32e-08,6;CL:0000677,2.32e-08,6;CL:0000584,2.32e-08,6;CL:0000068,3.63e-08,3;CL:0002202,3.63e-08,3;CL:0000069,3.63e-08,3;CL:0002632,3.63e-08,3;CL:0002368,3.63e-08,3;CL:0000307,3.63e-08,3;CL:0000377,3.63e-08,3;CL:0002027,8.07e-08,3;CL:0002006,8.07e-08,3;CL:0002024,8.07e-08,3;CL:0000075,3.10e-07,7;CL:0000057,9.48e-07,1;CL:0000632,9.48e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.14e-09!15;UBERON:0002384!2.36e-07!46;UBERON:0001242!2.57e-07!13;UBERON:0000060!2.57e-07!13;UBERON:0001262!2.57e-07!13;UBERON:0004786!2.57e-07!13 | |ontology_enrichment_uberon=UBERON:0000344!1.14e-09!15;UBERON:0002384!2.36e-07!46;UBERON:0001242!2.57e-07!13;UBERON:0000060!2.57e-07!13;UBERON:0001262!2.57e-07!13;UBERON:0004786!2.57e-07!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.00e-16,15;UBERON:0001962,2.99e-12,2;UBERON:0001961,2.99e-12,2;UBERON:0001744,2.99e-12,2;UBERON:0004923,3.31e-10,24;UBERON:0001242,6.52e-10,13;UBERON:0001262,6.52e-10,13;UBERON:0004786,6.52e-10,13;UBERON:0002465,1.89e-08,3;UBERON:0003126,3.63e-08,3;UBERON:0001005,3.63e-08,3;UBERON:0007196,3.63e-08,3;UBERON:0001558,3.63e-08,3;UBERON:0000331,7.46e-08,3;UBERON:0002116,7.46e-08,3;UBERON:0001204,7.46e-08,3;UBERON:0001168,7.46e-08,3;UBERON:0003199,5.73e-07,1 | |||
|phase1_expression=0,0.697950815278722,0,1.20985684522732,1.50268718983904,0,2.56973904655078,0.516493293766305,0.563154888606667,0.234064526321993,0.68487187290202,0.478632953972018,0.513602189793617,0.437102012094987,0,1.61980213911861,1.39912375625629,0.473193248037357,0.685572168028694,0,0.17008658030214,0,1.56719873483361,4.31979541542198,5.96464130774642,0,0,0.646413698057667,3.99049180858385,1.00812051903972,0.665191531965914,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0.186399445825301,1.06016670666458,0.755715601067855,0.869593466105033,2.58127163094416,0,0,0,0.448026887097336,0.140444420131752,0.170430322578058,0.779358013808606,1.06001872353102,0.14084341977668,0,0,0,0.865964164044856,1.77351905832569,3.0331466700887,0,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0.41557608911912,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63171705145613,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0.665957860122194,0.358855426437903,0.335769232728157,0.19318959403219,0.187682475451182,0,0,0,0,0,0,1.20297227640581,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0.237270036248348,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.697950815278722,0,1.20985684522732,1.50268718983904,0,2.56973904655078,0.516493293766305,0.563154888606667,0.234064526321993,0.68487187290202,0.478632953972018,0.513602189793617,0.437102012094987,0,1.61980213911861,1.39912375625629,0.473193248037357,0.685572168028694,0,0.17008658030214,0,1.56719873483361,4.31979541542198,5.96464130774642,0,0,0.646413698057667,3.99049180858385,1.00812051903972,0.665191531965914,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0.186399445825301,1.06016670666458,0.755715601067855,0.869593466105033,2.58127163094416,0,0,0,0.448026887097336,0.140444420131752,0.170430322578058,0.779358013808606,1.06001872353102,0.14084341977668,0,0,0,0.865964164044856,1.77351905832569,3.0331466700887,0,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0.41557608911912,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0,0.232533944750408,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0.147610147979602,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.63171705145613,0,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0,0,0,0,0.100966449948148,0,0,0,0,0,0.226730383615211,0.665957860122194,0.358855426437903,0.335769232728157,0.19318959403219,0.187682475451182,0,0,0,0,0,0,1.20297227640581,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0.237270036248348,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@ENSMUST00000120583 | |short_description=p1@ENSMUST00000120583 | ||
}} | }} |
Latest revision as of 21:19, 5 August 2015
Short description: | p1@ENSMUST00000120583 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000120583_5end |
Coexpression cluster: | MCL_coexpression_mm9:375 |
Association with transcript: | -19bp_to_ENSMUST00000120583_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.01e-08 | 15 |
brush border epithelial cell | 2.32e-08 | 6 |
gut absorptive cell | 2.32e-08 | 6 |
enterocyte | 2.32e-08 | 6 |
duct epithelial cell | 3.63e-08 | 3 |
epithelial cell of tracheobronchial tree | 3.63e-08 | 3 |
branched duct epithelial cell | 3.63e-08 | 3 |
epithelial cell of lower respiratory tract | 3.63e-08 | 3 |
respiratory epithelial cell | 3.63e-08 | 3 |
tracheal epithelial cell | 3.63e-08 | 3 |
tracheoblast | 3.63e-08 | 3 |
CD9-positive, CD41-positive megakaryocyte cell | 8.07e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 8.07e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 8.07e-08 | 3 |
columnar/cuboidal epithelial cell | 3.10e-07 | 7 |
fibroblast | 9.48e-07 | 1 |
hepatic stellate cell | 9.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.00e-16 | 15 |
gut-associated lymphoid tissue | 2.99e-12 | 2 |
mucosa-associated lymphoid tissue | 2.99e-12 | 2 |
lymphoid tissue | 2.99e-12 | 2 |
organ component layer | 3.31e-10 | 24 |
intestinal mucosa | 6.52e-10 | 13 |
wall of intestine | 6.52e-10 | 13 |
gastrointestinal system mucosa | 6.52e-10 | 13 |
lymphoid system | 1.89e-08 | 3 |
trachea | 3.63e-08 | 3 |
respiratory airway | 3.63e-08 | 3 |
tracheobronchial tree | 3.63e-08 | 3 |
lower respiratory tract | 3.63e-08 | 3 |
ileal mucosa | 7.46e-08 | 3 |
ileum | 7.46e-08 | 3 |
mucosa of small intestine | 7.46e-08 | 3 |
wall of small intestine | 7.46e-08 | 3 |
egg chamber | 5.73e-07 | 1 |