FFCP PHASE1:Mm9::chr6:4853350..4853367,+: Difference between revisions
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{{FFCP|EntrezGene=243725|HGNC=|MCL_coexpression_id=90|UniProt=Q7TN74|association_with_transcript=30bp_to_ENSMUST00000035813,NM_181595,uc009avy.1,uc009avz.1_5end|description=CAGE_peak_6_at_Ppp1r9a_5end|id=chr6:4853350..4853367,+|ontology_enrichment_celltype=CL:0000117!6.30e-07!23;CL:0000337!6.30e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-08,23;CL:0000337,1.23e-08,23;CL:0002612,6.68e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.42e-15!71;UBERON:0003075!5.42e-15!71;UBERON:0007284!5.42e-15!71;UBERON:0001049!6.96e-15!52;UBERON:0005068!6.96e-15!52;UBERON:0006241!6.96e-15!52;UBERON:0007135!6.96e-15!52;UBERON:0000033!1.25e-13!63;UBERON:0001017!1.64e-13!73;UBERON:0005743!1.64e-13!73;UBERON:0003056!2.58e-13!49;UBERON:0002020!3.35e-13!34;UBERON:0000955!7.33e-13!50;UBERON:0006238!7.33e-13!50;UBERON:0000073!1.70e-12!75;UBERON:0001016!1.70e-12!75;UBERON:0002616!2.21e-12!49;UBERON:0004121!7.14e-12!102;UBERON:0000924!7.14e-12!102;UBERON:0006601!7.14e-12!102;UBERON:0003080!4.30e-11!40;UBERON:0002791!9.77e-11!29;UBERON:0003528!9.77e-11!29;UBERON:0001893!9.77e-11!29;UBERON:0002780!1.66e-10!39;UBERON:0001890!1.66e-10!39;UBERON:0006240!1.66e-10!39;UBERON:0002021!1.09e-08!10;UBERON:0000411!1.09e-08!10;UBERON:0001950!1.09e-08!10;UBERON:0000956!7.61e-07!21;UBERON:0001869!7.61e-07!21;UBERON:0000203!7.61e-07!21;UBERON:0002619!8.43e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.52e-31,54;UBERON:0001049,4.10e-30,52;UBERON:0005068,4.10e-30,52;UBERON:0006241,4.10e-30,52;UBERON:0007135,4.10e-30,52;UBERON:0002020,1.59e-27,34;UBERON:0002346,1.15e-26,64;UBERON:0003075,1.15e-26,64;UBERON:0007284,1.15e-26,64;UBERON:0001017,3.64e-26,73;UBERON:0002616,2.84e-25,46;UBERON:0001016,2.93e-25,75;UBERON:0000955,1.34e-24,47;UBERON:0006238,1.34e-24,47;UBERON:0003528,1.76e-24,29;UBERON:0002791,1.76e-24,29;UBERON:0001893,1.76e-24,29;UBERON:0003080,7.13e-23,40;UBERON:0002021,1.34e-22,10;UBERON:0000411,1.34e-22,10;UBERON:0001950,1.34e-22,10;UBERON:0010371,1.87e-22,73;UBERON:0002780,2.70e-21,39;UBERON:0001890,2.70e-21,39;UBERON:0006240,2.70e-21,39;UBERON:0003056,4.40e-21,49;UBERON:0004121,5.42e-21,95;UBERON:0000924,5.42e-21,95;UBERON:0006601,5.42e-21,95;UBERON:0002619,1.33e-17,17;UBERON:0000956,2.45e-16,21;UBERON:0001869,2.45e-16,21;UBERON:0000203,2.45e-16,21;UBERON:0010314,2.84e-16,92;UBERON:0000025,8.76e-11,114;UBERON:0004111,1.31e-09,122;UBERON:0002420,2.44e-09,8;UBERON:0007245,2.44e-09,8;UBERON:0010009,2.44e-09,8;UBERON:0010011,2.44e-09,8;UBERON:0000454,2.44e-09,8;UBERON:0003076,1.33e-07,12;UBERON:0003057,1.33e-07,12;UBERON:0000369,2.45e-07,5;UBERON:0002435,2.45e-07,5;UBERON:0000204,2.45e-07,5;UBERON:0010082,2.45e-07,5;UBERON:0002257,6.68e-07,3|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0.515672092277442,0.809265843438391,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.829516898467821,0.135005938331691,0,0.571301968807607,0.662605622854841,0.489963196859816,0.287536413054709,0,0,1.65993539510744,2.4577045320999,0.659431438650969,1.09785172322892,2.08365348222704,0.279182999001381,1.68828783009504,1.98637722109853,2.06240009831567,1.56608848879013,2.05039390407831,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0.913396434936424,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,1.46390398505774,0.83778682725382,0.255457055208591,0,0,0,2.24685959107234,17.3850229071078,3.76963056338593,7.30062144807561,9.46147192122223,3.1168206683934,4.86723789203273,0.203678727700633,0,0.252722758433675,0,0.130120442962704,0.689706313300419,0.720248519221397,1.05493372485001,0.816437989815934,0.896796041993948,0.843315521037559,1.03481348295606,0,0.378212160335639,0.879755620819744,0.43839146485515,0.278047249225598,0,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.350296027101508,0.329119699826961,0,0.0810688095458557,0.292399974850665,0,0,5.25724871410318,1.02904612379284,0,0,0.213288250535234,0.232236671860439,0.644337306610467,0.403367049246685,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0,0.342745537829186,0,0.610953983535943,0,0.350679099451593,0.189709611372772,0.295220295959204,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0,0.252578877947112,0.358794827043824,0,0.184753190166605,0.757965647081939,0.325929952884052,0.169745085775188,0,0.670025029767263,0.238043640886014,0.195133647857799,0.788175720530955,0,1.11618338060241,0.163863314715738,0,0,0,0,0,0,1.28440471990234,2.10981035865966,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.790575555893047,0.963963949265421,0,0.534196811001766,0.325773918707152,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.900305470156551,0.129358683782755,0.214337035031592,0,0.535106452806212,0.493647061806363,0,0.23467170806371,0.42366414172764,0,0.16488625294148,0.484393280087717,0.120625849856312,0,0.164140899745061,0,1.66882771809459,0,0.619160603889667,0,0.188368457004691,0,0,0,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0,0,0,0.56369293868419,0.448549638131936,0.165458490457098,0.583353565032143,0.387479470433193,0.337912250981556,0.352071715937262,1.43224823328345,0.734015410979976,0.966336483304024,0.576060012515731,0,0.405450430580328,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0,0,0.386379188064381,0,0.183151624267265,0,0,4.51801474093653,5.52390283808612,4.58316410751517,4.1244763762485,8.22099023724771,15.107877947794,4.72515750162264,6.30449684513909,5.43770890781046,3.10656187051092,0.207574695168353,0.399024873401031,0.512200817262403,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.618105171716683,0.64183841918363,1.01078884705519,0.25347929989024,0.377252682772152,0.655490552289177,0.576226371643824,0.402048282689293,1.90517476513229,0.579421629724277,0.77163688185482,0.824171801606613,0.735994600671987,0.342869252385415,0.887379030796687,0.715308569841963,0.726732083161643,0.846984423737976,0.338458431566706,0.365855945745545,0.526139422875686,0.407412341537585,1.12228454331548,0.355905054372522,0.492522411877817,0.409231043169689,0.309873682371932,1.15743966588685,0.249810577937946,0.233931608445408,0.429742108096597,0.382576664137687,0,0.231867835620421|short_description=p6@Ppp1r9a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:243725 | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q7TN74 | |||
|association_with_transcript=30bp_to_ENSMUST00000035813,NM_181595,uc009avy.1,uc009avz.1_5end | |||
|cluster_id=chr6:4853350..4853367,+ | |||
|description=CAGE_peak_6_at_Ppp1r9a_5end | |||
|id=chr6:4853350..4853367,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.30e-07!23;CL:0000337!6.30e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.23e-08,23;CL:0000337,1.23e-08,23;CL:0002612,6.68e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.42e-15!71;UBERON:0003075!5.42e-15!71;UBERON:0007284!5.42e-15!71;UBERON:0001049!6.96e-15!52;UBERON:0005068!6.96e-15!52;UBERON:0006241!6.96e-15!52;UBERON:0007135!6.96e-15!52;UBERON:0000033!1.25e-13!63;UBERON:0001017!1.64e-13!73;UBERON:0005743!1.64e-13!73;UBERON:0003056!2.58e-13!49;UBERON:0002020!3.35e-13!34;UBERON:0000955!7.33e-13!50;UBERON:0006238!7.33e-13!50;UBERON:0000073!1.70e-12!75;UBERON:0001016!1.70e-12!75;UBERON:0002616!2.21e-12!49;UBERON:0004121!7.14e-12!102;UBERON:0000924!7.14e-12!102;UBERON:0006601!7.14e-12!102;UBERON:0003080!4.30e-11!40;UBERON:0002791!9.77e-11!29;UBERON:0003528!9.77e-11!29;UBERON:0001893!9.77e-11!29;UBERON:0002780!1.66e-10!39;UBERON:0001890!1.66e-10!39;UBERON:0006240!1.66e-10!39;UBERON:0002021!1.09e-08!10;UBERON:0000411!1.09e-08!10;UBERON:0001950!1.09e-08!10;UBERON:0000956!7.61e-07!21;UBERON:0001869!7.61e-07!21;UBERON:0000203!7.61e-07!21;UBERON:0002619!8.43e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.52e-31,54;UBERON:0001049,4.10e-30,52;UBERON:0005068,4.10e-30,52;UBERON:0006241,4.10e-30,52;UBERON:0007135,4.10e-30,52;UBERON:0002020,1.59e-27,34;UBERON:0002346,1.15e-26,64;UBERON:0003075,1.15e-26,64;UBERON:0007284,1.15e-26,64;UBERON:0001017,3.64e-26,73;UBERON:0002616,2.84e-25,46;UBERON:0001016,2.93e-25,75;UBERON:0000955,1.34e-24,47;UBERON:0006238,1.34e-24,47;UBERON:0003528,1.76e-24,29;UBERON:0002791,1.76e-24,29;UBERON:0001893,1.76e-24,29;UBERON:0003080,7.13e-23,40;UBERON:0002021,1.34e-22,10;UBERON:0000411,1.34e-22,10;UBERON:0001950,1.34e-22,10;UBERON:0010371,1.87e-22,73;UBERON:0002780,2.70e-21,39;UBERON:0001890,2.70e-21,39;UBERON:0006240,2.70e-21,39;UBERON:0003056,4.40e-21,49;UBERON:0004121,5.42e-21,95;UBERON:0000924,5.42e-21,95;UBERON:0006601,5.42e-21,95;UBERON:0002619,1.33e-17,17;UBERON:0000956,2.45e-16,21;UBERON:0001869,2.45e-16,21;UBERON:0000203,2.45e-16,21;UBERON:0010314,2.84e-16,92;UBERON:0000025,8.76e-11,114;UBERON:0004111,1.31e-09,122;UBERON:0002420,2.44e-09,8;UBERON:0007245,2.44e-09,8;UBERON:0010009,2.44e-09,8;UBERON:0010011,2.44e-09,8;UBERON:0000454,2.44e-09,8;UBERON:0003076,1.33e-07,12;UBERON:0003057,1.33e-07,12;UBERON:0000369,2.45e-07,5;UBERON:0002435,2.45e-07,5;UBERON:0000204,2.45e-07,5;UBERON:0010082,2.45e-07,5;UBERON:0002257,6.68e-07,3 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0.515672092277442,0.809265843438391,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.829516898467821,0.135005938331691,0,0.571301968807607,0.662605622854841,0.489963196859816,0.287536413054709,0,0,1.65993539510744,2.4577045320999,0.659431438650969,1.09785172322892,2.08365348222704,0.279182999001381,1.68828783009504,1.98637722109853,2.06240009831567,1.56608848879013,2.05039390407831,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0.913396434936424,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0,0,0,0,0,0,1.46390398505774,0.83778682725382,0.255457055208591,0,0,0,2.24685959107234,17.3850229071078,3.76963056338593,7.30062144807561,9.46147192122223,3.1168206683934,4.86723789203273,0.203678727700633,0,0.252722758433675,0,0.130120442962704,0.689706313300419,0.720248519221397,1.05493372485001,0.816437989815934,0.896796041993948,0.843315521037559,1.03481348295606,0,0.378212160335639,0.879755620819744,0.43839146485515,0.278047249225598,0,0.205782136407943,0.796137067273973,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0.350296027101508,0.329119699826961,0,0.0810688095458557,0.292399974850665,0,0,5.25724871410318,1.02904612379284,0,0,0.213288250535234,0.232236671860439,0.644337306610467,0.403367049246685,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0,0.342745537829186,0,0.610953983535943,0,0.350679099451593,0.189709611372772,0.295220295959204,0,0,0,0,0.196558995113203,0,0.202860121388503,0,0,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0,0.252578877947112,0.358794827043824,0,0.184753190166605,0.757965647081939,0.325929952884052,0.169745085775188,0,0.670025029767263,0.238043640886014,0.195133647857799,0.788175720530955,0,1.11618338060241,0.163863314715738,0,0,0,0,0,0,1.28440471990234,2.10981035865966,0,0,0,0,0,0.238968797952552,0,0,0.404810701674894,0.292255857911312,0.790575555893047,0.963963949265421,0,0.534196811001766,0.325773918707152,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0.900305470156551,0.129358683782755,0.214337035031592,0,0.535106452806212,0.493647061806363,0,0.23467170806371,0.42366414172764,0,0.16488625294148,0.484393280087717,0.120625849856312,0,0.164140899745061,0,1.66882771809459,0,0.619160603889667,0,0.188368457004691,0,0,0,0,0.138199973804424,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.218362563746178,0,0.0826534557253359,0,0,0,0.56369293868419,0.448549638131936,0.165458490457098,0.583353565032143,0.387479470433193,0.337912250981556,0.352071715937262,1.43224823328345,0.734015410979976,0.966336483304024,0.576060012515731,0,0.405450430580328,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0,0,0.386379188064381,0,0.183151624267265,0,0,4.51801474093653,5.52390283808612,4.58316410751517,4.1244763762485,8.22099023724771,15.107877947794,4.72515750162264,6.30449684513909,5.43770890781046,3.10656187051092,0.207574695168353,0.399024873401031,0.512200817262403,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.618105171716683,0.64183841918363,1.01078884705519,0.25347929989024,0.377252682772152,0.655490552289177,0.576226371643824,0.402048282689293,1.90517476513229,0.579421629724277,0.77163688185482,0.824171801606613,0.735994600671987,0.342869252385415,0.887379030796687,0.715308569841963,0.726732083161643,0.846984423737976,0.338458431566706,0.365855945745545,0.526139422875686,0.407412341537585,1.12228454331548,0.355905054372522,0.492522411877817,0.409231043169689,0.309873682371932,1.15743966588685,0.249810577937946,0.233931608445408,0.429742108096597,0.382576664137687,0,0.231867835620421 | |||
|short_description=p6@Ppp1r9a | |||
}} |
Revision as of 19:57, 5 August 2015
Short description: | p6@Ppp1r9a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Ppp1r9a_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | 30bp_to_ENSMUST00000035813, NM_181595, uc009avy.1, uc009avz.1_5end |
EntrezGene: | 243725 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.23e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.23e-08 | 23 |
neuron of the ventral spinal cord | 6.68e-07 | 3 |