FFCP PHASE1:Mm9::chr4:88584327..88584337,-: Difference between revisions
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|id=chr4:88584327..88584337,-
|short_description=p@chr4:88584327..88584337,-
|description=CAGE_peak_at_chr4:88584327..88584337,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1948 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:88584327..88584337,- | |||
|description=CAGE_peak_at_chr4:88584327..88584337,- | |||
|id=chr4:88584327..88584337,- | |||
|ontology_enrichment_celltype=CL:0002563!2.28e-07!9;CL:0002251!2.28e-07!9;CL:0002076!3.94e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.56e-13,6;CL:0000677,4.56e-13,6;CL:0000584,4.56e-13,6;CL:0002076,6.15e-13,15;CL:0000066,2.89e-11,25;CL:0000068,2.91e-11,3;CL:0002202,2.91e-11,3;CL:0000069,2.91e-11,3;CL:0002632,2.91e-11,3;CL:0002368,2.91e-11,3;CL:0000307,2.91e-11,3;CL:0000377,2.91e-11,3;CL:0000075,3.66e-11,7;CL:0000223,2.22e-09,20;CL:0002563,1.28e-08,9;CL:0002251,1.28e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.10e-12!43;UBERON:0005409!1.11e-10!59;UBERON:0000344!5.08e-10!15;UBERON:0001242!7.48e-09!13;UBERON:0000060!7.48e-09!13;UBERON:0001262!7.48e-09!13;UBERON:0004786!7.48e-09!13;UBERON:0004119!4.43e-08!130;UBERON:0000925!4.43e-08!130;UBERON:0006595!4.43e-08!130;UBERON:0001007!4.62e-08!128;UBERON:0001555!4.62e-08!128;UBERON:0007026!4.62e-08!128;UBERON:0003350!2.28e-07!9;UBERON:0004808!2.28e-07!9;UBERON:0001277!2.28e-07!9;UBERON:0004921!2.52e-07!126;UBERON:0004185!2.52e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.94e-20,31;UBERON:0005409,1.29e-15,47;UBERON:0001007,2.37e-12,116;UBERON:0001555,2.37e-12,116;UBERON:0007026,2.37e-12,116;UBERON:0004119,4.64e-12,118;UBERON:0000925,4.64e-12,118;UBERON:0006595,4.64e-12,118;UBERON:0004921,1.95e-11,114;UBERON:0003126,2.91e-11,3;UBERON:0001005,2.91e-11,3;UBERON:0007196,2.91e-11,3;UBERON:0001558,2.91e-11,3;UBERON:0000344,2.24e-09,15;UBERON:0003350,1.28e-08,9;UBERON:0004808,1.28e-08,9;UBERON:0001277,1.28e-08,9;UBERON:0001242,2.96e-08,13;UBERON:0001262,2.96e-08,13;UBERON:0004786,2.96e-08,13;UBERON:0000485,5.38e-07,11;UBERON:0001155,6.09e-07,2;UBERON:0000059,6.09e-07,2 | |||
|phase1_expression=0.160148847104794,1.04692622291808,1.36499771816861,4.23449895829562,1.50268718983904,2.51818907867835,0.934450562382103,0,0,1.17032263160997,0.171217968225505,0.478632953972018,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.11994695955385,0.45881856213434,0.57423196411502,2.15380998079537,1.07735616342945,0.190023419456374,0.252030129759931,0.443461021310609,0,0.61506478758457,0,0.577703239502549,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0.889294796111139,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558365998002762,0,0,0.294628585473668,0,0.186399445825301,0.832988126665025,0.453429360640713,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,5.84525810730278,5.82727690592727,7.58286667522175,0.45673551887624,0,0,0,0,0,0,0,0.125666591329675,0.494389935468748,0.144599356919912,0,0,0,0.484875253135222,1.86391761218122,0,0.209446706813455,1.02182822083437,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0,0.252722758433675,0.420883711772948,0,0,0.540186389416048,0.150704817835715,0,0.2562274405697,0,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.85115396664481,0.213288250535234,0,0.38660238396628,1.61346819698674,0.889512175379481,0.570676878337677,1.42358718463353,0.823494773620054,1.25667604400135,0.198956472041151,1.16978452271472,0.898819408654221,0.648414149624083,1.99141273254367,0,0,1.1270773567308,0,0,0.0701358198903186,0,0,0,0,0.889357881261447,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0.505157755894224,0,0,0.369506380333209,0,0,0.169745085775188,0.469380496577004,0,0,0,0,0,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0.163934945376675,0,0.315508219416257,0,0,0,0,0,0,0,0.395287777946524,0,0.283880170416537,0,0,0.494910368917606,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0.177340233642274,0,0.329098041204242,0,0,0.21183207086382,0,0.8244312647074,0.484393280087717,0.422190474497091,0.358117032009409,1.31312719796049,1.7488850197791,0,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0.209088296014469,1.09181281873089,0.674321731924103,0.578574190077352,1.04702376793612,0,1.86401793926078,0,0.299033092087958,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0,1.15913756419314,0.750729901804728,0.549454872801795,4.93047271881851,0.501572104035363,0.564751842617067,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0.50695859978048,0,0,0.128050304809739,0.17230640686684,0,0.115884325944855,0.578727661391115,0,0.294397840268795,0,0.177475806159338,0.476872379894642,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0.526139422875686,0,0,0.237270036248348,0,0.409231043169689,0,0.385813221962283,0,0.233931608445408,0,0.191288332068843,0,0 | |phase1_expression=0.160148847104794,1.04692622291808,1.36499771816861,4.23449895829562,1.50268718983904,2.51818907867835,0.934450562382103,0,0,1.17032263160997,0.171217968225505,0.478632953972018,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.11994695955385,0.45881856213434,0.57423196411502,2.15380998079537,1.07735616342945,0.190023419456374,0.252030129759931,0.443461021310609,0,0.61506478758457,0,0.577703239502549,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0.889294796111139,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558365998002762,0,0,0.294628585473668,0,0.186399445825301,0.832988126665025,0.453429360640713,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,5.84525810730278,5.82727690592727,7.58286667522175,0.45673551887624,0,0,0,0,0,0,0,0.125666591329675,0.494389935468748,0.144599356919912,0,0,0,0.484875253135222,1.86391761218122,0,0.209446706813455,1.02182822083437,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0,0.252722758433675,0.420883711772948,0,0,0.540186389416048,0.150704817835715,0,0.2562274405697,0,0,0,0,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.85115396664481,0.213288250535234,0,0.38660238396628,1.61346819698674,0.889512175379481,0.570676878337677,1.42358718463353,0.823494773620054,1.25667604400135,0.198956472041151,1.16978452271472,0.898819408654221,0.648414149624083,1.99141273254367,0,0,1.1270773567308,0,0,0.0701358198903186,0,0,0,0,0.889357881261447,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0,0,0.505157755894224,0,0,0.369506380333209,0,0,0.169745085775188,0.469380496577004,0,0,0,0,0,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0.163934945376675,0,0.315508219416257,0,0,0,0,0,0,0,0.395287777946524,0,0.283880170416537,0,0,0.494910368917606,0,0.242780636154981,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0.177340233642274,0,0.329098041204242,0,0,0.21183207086382,0,0.8244312647074,0.484393280087717,0.422190474497091,0.358117032009409,1.31312719796049,1.7488850197791,0,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0,0,0,0.108005340821801,0.209088296014469,1.09181281873089,0.674321731924103,0.578574190077352,1.04702376793612,0,1.86401793926078,0,0.299033092087958,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0.129920822977795,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0.453460767230423,0,0,0,1.15913756419314,0.750729901804728,0.549454872801795,4.93047271881851,0.501572104035363,0.564751842617067,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0.50695859978048,0,0,0.128050304809739,0.17230640686684,0,0.115884325944855,0.578727661391115,0,0.294397840268795,0,0.177475806159338,0.476872379894642,0.145346416632329,0.188218760830661,0.169229215783353,0.182927972872773,0.526139422875686,0,0,0.237270036248348,0,0.409231043169689,0,0.385813221962283,0,0.233931608445408,0,0.191288332068843,0,0 | ||
|short_description=p@chr4:88584327..88584337,- | |||
}} | }} |
Latest revision as of 19:32, 5 August 2015
Short description: | p@chr4:88584327..88584337, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:88584327..88584337, - |
Coexpression cluster: | MCL_coexpression_mm9:1948 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.56e-13 | 6 |
gut absorptive cell | 4.56e-13 | 6 |
enterocyte | 4.56e-13 | 6 |
endo-epithelial cell | 6.15e-13 | 15 |
epithelial cell | 2.89e-11 | 25 |
duct epithelial cell | 2.91e-11 | 3 |
epithelial cell of tracheobronchial tree | 2.91e-11 | 3 |
branched duct epithelial cell | 2.91e-11 | 3 |
epithelial cell of lower respiratory tract | 2.91e-11 | 3 |
respiratory epithelial cell | 2.91e-11 | 3 |
tracheal epithelial cell | 2.91e-11 | 3 |
tracheoblast | 2.91e-11 | 3 |
columnar/cuboidal epithelial cell | 3.66e-11 | 7 |
endodermal cell | 2.22e-09 | 20 |
intestinal epithelial cell | 1.28e-08 | 9 |
epithelial cell of alimentary canal | 1.28e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.94e-20 | 31 |
gastrointestinal system | 1.29e-15 | 47 |
digestive system | 2.37e-12 | 116 |
digestive tract | 2.37e-12 | 116 |
primitive gut | 2.37e-12 | 116 |
endoderm-derived structure | 4.64e-12 | 118 |
endoderm | 4.64e-12 | 118 |
presumptive endoderm | 4.64e-12 | 118 |
subdivision of digestive tract | 1.95e-11 | 114 |
trachea | 2.91e-11 | 3 |
respiratory airway | 2.91e-11 | 3 |
tracheobronchial tree | 2.91e-11 | 3 |
lower respiratory tract | 2.91e-11 | 3 |
mucosa | 2.24e-09 | 15 |
epithelium of mucosa | 1.28e-08 | 9 |
gastrointestinal system epithelium | 1.28e-08 | 9 |
intestinal epithelium | 1.28e-08 | 9 |
intestinal mucosa | 2.96e-08 | 13 |
wall of intestine | 2.96e-08 | 13 |
gastrointestinal system mucosa | 2.96e-08 | 13 |
simple columnar epithelium | 5.38e-07 | 11 |
colon | 6.09e-07 | 2 |
large intestine | 6.09e-07 | 2 |