FFCP PHASE1:Mm9::chr1:58852536..58852554,+: Difference between revisions
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{{FFCP|EntrezGene=12370|HGNC=|UniProt=O89110,Q3U607|association_with_transcript=318bp_to_ENSMUST00000027189,NM_009812,uc007bcs.1_5end|description=CAGE_peak_7_at_Casp8_5end|id=chr1:58852536..58852554,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000542,2.61e-08,13;CL:0000051,2.61e-08,13;CL:0000791,4.67e-08,9;CL:0000789,4.67e-08,9;CL:0002420,4.67e-08,9;CL:0002419,4.67e-08,9;CL:0000790,4.67e-08,9;CL:0000838,6.11e-08,12;CL:0000624,1.07e-07,8;CL:0000084,2.19e-07,11;CL:0000827,2.19e-07,11;CL:0000066,9.00e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!1.08e-20!128;UBERON:0001555!1.08e-20!128;UBERON:0007026!1.08e-20!128;UBERON:0004119!1.18e-19!130;UBERON:0000925!1.18e-19!130;UBERON:0006595!1.18e-19!130;UBERON:0004921!1.49e-19!126;UBERON:0004185!1.49e-19!126;UBERON:0005409!1.30e-10!59;UBERON:0001041!1.91e-09!92;UBERON:0000077!7.88e-09!97;UBERON:0005911!7.44e-08!69;UBERON:0000344!9.03e-08!15;UBERON:0000160!8.64e-07!43;UBERON:0003104!8.89e-07!131;UBERON:0009142!8.89e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0001007,3.48e-23,116;UBERON:0001555,3.48e-23,116;UBERON:0007026,3.48e-23,116;UBERON:0004119,2.08e-22,118;UBERON:0000925,2.08e-22,118;UBERON:0006595,2.08e-22,118;UBERON:0004921,1.28e-21,114;UBERON:0005409,3.76e-16,47;UBERON:0000160,7.56e-12,31;UBERON:0001041,7.24e-10,80;UBERON:0000344,8.09e-10,15;UBERON:0001242,3.33e-08,13;UBERON:0001262,3.33e-08,13;UBERON:0004786,3.33e-08,13|phase1_expression=0.480446541314382,3.48975407639361,2.27499619694768,2.41971369045464,4.50806156951712,0.671517087647559,3.27057696833736,17.9481419583791,3.94208422024667,6.78787126333781,1.36974374580404,1.59544317990673,4.10881751834894,1.66098764596095,0.333109761815663,1.01237633694913,0,1.89277299214943,2.05671650408608,1.69755860719212,0.340173160604279,0.992909512008853,1.30599894569468,2.71987118748791,3.89995777814189,5.16808767703518,3.4460959692726,4.09395342103189,5.32065574477847,3.52842181663903,5.54326276638262,0.635030673459631,0,0,1.44425809875637,0.831173226792462,1.42918549383658,0,0,0.523523743973798,0,0.683045484958446,0.485510353031154,0.251793635951155,0.608261587317087,0.550640256485045,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,1.67782606057736,2.90144856804538,1.34437519656986,0.771778308107841,0.573066879877513,1.03134418455488,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0.142371680799103,0,0.075726193333184,0.151143120213571,1.44932244350839,0.860423876981386,0.679971333707751,0.539703191637817,1.29955283489534,2.68816132258401,0.702222100658759,0.681721290312231,0.519572009205738,0,0.985903938436763,0,0,0,4.11332977921307,3.80039798212648,4.54972000513305,1.1418387971906,6.47344709117929,0.29688427812965,0.173485326766136,0,0.461230994512117,0.452167921657868,0.705532242814229,0.502666365318702,0.494389935468748,0.289198713839823,0,0,0,0.484875253135222,3.72783522436244,0,0,2.55457055208591,1.07833612055328,0,0.635351135365324,0.149790639404823,0,0,0,0.255715457330331,0,0.324482526135515,0.81471491080253,0.373220911830279,0.758168275301024,0.210441855886474,0.910843100738926,0.689706313300419,0.360124259610698,0.452114453507145,0.0680364991513279,0.12811372028485,0.374806898238915,0.258703370739016,0.862271971731369,0.567318240503458,2.11141348996739,0.43839146485515,1.11218899690239,1.74126083261083,0.823128545631774,0.796137067273973,0,0.51469581422943,1.42081749697796,0.207125772535502,0.703578179943289,0.180062061461015,0.473489471170421,0.393528463494808,0,0.232533944750408,0.268273401399619,0.116765342367169,0.493679549740441,0.820837320395476,0.162137619091711,0,0.439100230582101,0.671032093801859,0.420579897128254,0.205809224758569,8.59088835757875,3.43785736662608,1.2797295032114,0.464473343720877,1.15980715189884,1.00841762311671,0,2.47293313946327,3.32170343081158,0.988193728344065,1.00534083520108,1.39269530428806,1.36474860983384,0.898819408654221,3.45820879799511,2.58883655230677,0.758671603812327,0.799739588268102,1.1270773567308,0.610953983535943,0.969762435838129,0.280543279561274,0.822074982615345,0.442830443938806,0.470996183524124,0.370191491765402,4.44678940630723,0.166845105716094,0.393117990226406,0.674586337154561,0,0,0.50925170356284,0.575392274901621,0.324270453550071,1.09824565275233,2.87536413054709,2.60498663367952,1.24815069245824,2.02063102357689,1.79397413521912,0.482443521363367,0.923765950833023,0.757965647081939,0.977789858652155,1.18821560042632,1.17345124144251,2.34508760418542,0.952174563544055,1.17080188714679,0.945810864637146,0.664394068946325,0.318909537314974,0.491589944147214,1.20879487306127,1.15719246865209,0,0.54390568381871,6.39293554924747,4.41498794087572,0,0,0.819674726883377,0.504941854408746,0.315508219416257,0.390438744296638,0,0.238968797952552,0.222798674082394,0,0.809621403349789,0,0,0,0.851640511249612,1.06839362200353,0.977321756121456,2.3095817216155,1.327451383399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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12370 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O89110,uniprot:Q3U607 | |||
|association_with_transcript=318bp_to_ENSMUST00000027189,NM_009812,uc007bcs.1_5end | |||
|cluster_id=chr1:58852536..58852554,+ | |||
|description=CAGE_peak_7_at_Casp8_5end | |||
|id=chr1:58852536..58852554,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.61e-08,13;CL:0000051,2.61e-08,13;CL:0000791,4.67e-08,9;CL:0000789,4.67e-08,9;CL:0002420,4.67e-08,9;CL:0002419,4.67e-08,9;CL:0000790,4.67e-08,9;CL:0000838,6.11e-08,12;CL:0000624,1.07e-07,8;CL:0000084,2.19e-07,11;CL:0000827,2.19e-07,11;CL:0000066,9.00e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.08e-20!128;UBERON:0001555!1.08e-20!128;UBERON:0007026!1.08e-20!128;UBERON:0004119!1.18e-19!130;UBERON:0000925!1.18e-19!130;UBERON:0006595!1.18e-19!130;UBERON:0004921!1.49e-19!126;UBERON:0004185!1.49e-19!126;UBERON:0005409!1.30e-10!59;UBERON:0001041!1.91e-09!92;UBERON:0000077!7.88e-09!97;UBERON:0005911!7.44e-08!69;UBERON:0000344!9.03e-08!15;UBERON:0000160!8.64e-07!43;UBERON:0003104!8.89e-07!131;UBERON:0009142!8.89e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,3.48e-23,116;UBERON:0001555,3.48e-23,116;UBERON:0007026,3.48e-23,116;UBERON:0004119,2.08e-22,118;UBERON:0000925,2.08e-22,118;UBERON:0006595,2.08e-22,118;UBERON:0004921,1.28e-21,114;UBERON:0005409,3.76e-16,47;UBERON:0000160,7.56e-12,31;UBERON:0001041,7.24e-10,80;UBERON:0000344,8.09e-10,15;UBERON:0001242,3.33e-08,13;UBERON:0001262,3.33e-08,13;UBERON:0004786,3.33e-08,13 | |||
|phase1_expression=0.480446541314382,3.48975407639361,2.27499619694768,2.41971369045464,4.50806156951712,0.671517087647559,3.27057696833736,17.9481419583791,3.94208422024667,6.78787126333781,1.36974374580404,1.59544317990673,4.10881751834894,1.66098764596095,0.333109761815663,1.01237633694913,0,1.89277299214943,2.05671650408608,1.69755860719212,0.340173160604279,0.992909512008853,1.30599894569468,2.71987118748791,3.89995777814189,5.16808767703518,3.4460959692726,4.09395342103189,5.32065574477847,3.52842181663903,5.54326276638262,0.635030673459631,0,0,1.44425809875637,0.831173226792462,1.42918549383658,0,0,0.523523743973798,0,0.683045484958446,0.485510353031154,0.251793635951155,0.608261587317087,0.550640256485045,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,1.67782606057736,2.90144856804538,1.34437519656986,0.771778308107841,0.573066879877513,1.03134418455488,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0.142371680799103,0,0.075726193333184,0.151143120213571,1.44932244350839,0.860423876981386,0.679971333707751,0.539703191637817,1.29955283489534,2.68816132258401,0.702222100658759,0.681721290312231,0.519572009205738,0,0.985903938436763,0,0,0,4.11332977921307,3.80039798212648,4.54972000513305,1.1418387971906,6.47344709117929,0.29688427812965,0.173485326766136,0,0.461230994512117,0.452167921657868,0.705532242814229,0.502666365318702,0.494389935468748,0.289198713839823,0,0,0,0.484875253135222,3.72783522436244,0,0,2.55457055208591,1.07833612055328,0,0.635351135365324,0.149790639404823,0,0,0,0.255715457330331,0,0.324482526135515,0.81471491080253,0.373220911830279,0.758168275301024,0.210441855886474,0.910843100738926,0.689706313300419,0.360124259610698,0.452114453507145,0.0680364991513279,0.12811372028485,0.374806898238915,0.258703370739016,0.862271971731369,0.567318240503458,2.11141348996739,0.43839146485515,1.11218899690239,1.74126083261083,0.823128545631774,0.796137067273973,0,0.51469581422943,1.42081749697796,0.207125772535502,0.703578179943289,0.180062061461015,0.473489471170421,0.393528463494808,0,0.232533944750408,0.268273401399619,0.116765342367169,0.493679549740441,0.820837320395476,0.162137619091711,0,0.439100230582101,0.671032093801859,0.420579897128254,0.205809224758569,8.59088835757875,3.43785736662608,1.2797295032114,0.464473343720877,1.15980715189884,1.00841762311671,0,2.47293313946327,3.32170343081158,0.988193728344065,1.00534083520108,1.39269530428806,1.36474860983384,0.898819408654221,3.45820879799511,2.58883655230677,0.758671603812327,0.799739588268102,1.1270773567308,0.610953983535943,0.969762435838129,0.280543279561274,0.822074982615345,0.442830443938806,0.470996183524124,0.370191491765402,4.44678940630723,0.166845105716094,0.393117990226406,0.674586337154561,0,0,0.50925170356284,0.575392274901621,0.324270453550071,1.09824565275233,2.87536413054709,2.60498663367952,1.24815069245824,2.02063102357689,1.79397413521912,0.482443521363367,0.923765950833023,0.757965647081939,0.977789858652155,1.18821560042632,1.17345124144251,2.34508760418542,0.952174563544055,1.17080188714679,0.945810864637146,0.664394068946325,0.318909537314974,0.491589944147214,1.20879487306127,1.15719246865209,0,0.54390568381871,6.39293554924747,4.41498794087572,0,0,0.819674726883377,0.504941854408746,0.315508219416257,0.390438744296638,0,0.238968797952552,0.222798674082394,0,0.809621403349789,0,0,0,0.851640511249612,1.06839362200353,0.977321756121456,2.3095817216155,1.32745138339963,0.485561272309963,0.302323556964751,0.565815239267694,0.590603785761546,1.22974059177571,0.516856586336442,0.363533729477506,0.712994756769443,0,0,0,2.7235168460303,0.540183282093931,0.776152102696527,0.428674070063185,1.06404140185364,0.356737635204141,0.987294123612726,0.304464949114599,0.23467170806371,0,0.220528398054962,2.80306630000516,0.807322133479528,1.38719727334758,0.716234064018819,0.164140899745061,0.582961673259701,0,1.19609616558497,0.619160603889667,0.370389054739423,0.188368457004691,0.956859594047176,0.915112692826091,0.849892149969277,1.11961161858926,0.829199842826543,3.81868247206045,1.58167996790568,1.82987520414164,1.62008011232702,2.09088296014469,2.40198820120795,4.98998081623837,3.30613822901344,2.35580347785627,6.09190374471426,2.4853572523477,0,0.299033092087958,0.330916980914195,0.388902376688095,0.129159823477731,0.337912250981556,0.352071715937262,0.5208175393758,0.629156066554265,0.724752362478018,0.288030006257865,0.316011120628178,1.62180172232131,1.54066435747241,1.29920822977795,0.716106782669926,0.79472541912506,1.44234539423963,2.06765338044408,0.908698049533329,0.838274873204998,0.907435666231565,0.584747284438515,0.384847366561318,1.40252282617883,1.13365191807606,0,0,0,0.579568782096571,0.93841237725591,3.11357761254351,4.28736758158132,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.798049746802062,0.682934423016537,0.243106717068294,0.838452650511929,0.183843508450014,0.888986911206461,0.618105171716683,0.641838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| |||
|short_description=p7@Casp8 | |||
}} |
Revision as of 19:23, 5 August 2015
Short description: | p7@Casp8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Casp8_5end |
Coexpression cluster: | NA |
Association with transcript: | 318bp_to_ENSMUST00000027189, NM_009812, uc007bcs.1_5end |
EntrezGene: | 12370 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.61e-08 | 13 |
common lymphoid progenitor | 2.61e-08 | 13 |
mature alpha-beta T cell | 4.67e-08 | 9 |
alpha-beta T cell | 4.67e-08 | 9 |
immature T cell | 4.67e-08 | 9 |
mature T cell | 4.67e-08 | 9 |
immature alpha-beta T cell | 4.67e-08 | 9 |
lymphoid lineage restricted progenitor cell | 6.11e-08 | 12 |
CD4-positive, alpha-beta T cell | 1.07e-07 | 8 |
T cell | 2.19e-07 | 11 |
pro-T cell | 2.19e-07 | 11 |
epithelial cell | 9.00e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
digestive system | 3.48e-23 | 116 |
digestive tract | 3.48e-23 | 116 |
primitive gut | 3.48e-23 | 116 |
endoderm-derived structure | 2.08e-22 | 118 |
endoderm | 2.08e-22 | 118 |
presumptive endoderm | 2.08e-22 | 118 |
subdivision of digestive tract | 1.28e-21 | 114 |
gastrointestinal system | 3.76e-16 | 47 |
intestine | 7.56e-12 | 31 |
foregut | 7.24e-10 | 80 |
mucosa | 8.09e-10 | 15 |
intestinal mucosa | 3.33e-08 | 13 |
wall of intestine | 3.33e-08 | 13 |
gastrointestinal system mucosa | 3.33e-08 | 13 |