FFCP PHASE1:Mm9::chr2:93031268..93031274,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=277414|HGNC=|UniProt=|association_with_transcript=60bp_to_uc008lft.1_5end|description=CAGE_peak_4_at_Trp53i11_5end|id=chr2:93031268..93031274,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000077,7.11e-12,35;UBERON:0004177,7.69e-12,29;UBERON:0005057,7.69e-12,29;UBERON:0002390,2.76e-11,45;UBERON:0003061,2.76e-11,45;UBERON:0002193,2.91e-10,48;UBERON:0002405,2.91e-10,48;UBERON:0002370,2.12e-08,23;UBERON:0000974,2.12e-08,23;UBERON:0004807,2.12e-08,23;UBERON:0005058,2.12e-08,23;UBERON:0003351,2.12e-08,23;UBERON:0009113,2.12e-08,23;UBERON:0003295,2.12e-08,23;UBERON:0009722,2.12e-08,23;UBERON:0005562,2.12e-08,23;UBERON:0007690,2.12e-08,23;UBERON:0003081,2.60e-08,87;UBERON:0006562,6.11e-08,24;UBERON:0003408,6.11e-08,24;UBERON:0001557,6.11e-08,24;UBERON:0001042,6.11e-08,24;UBERON:0008814,6.11e-08,24;UBERON:0009145,6.11e-08,24;UBERON:0000072,9.02e-07,27|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0.258246646883153,0.281577444303333,0.468129052643987,0,0,0.342401459862411,0.174840804837995,0.666219523631325,1.82227740650843,0.699561878128147,3.15462165358238,4.52477630898938,3.81950686618227,0.425216450755349,0.198581902401771,0.261199789138935,0.319984845586813,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0.194429899074283,0,0,3.18786951509699,1.45072428402269,0.336093799142464,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.622137673850866,0.945041568321835,0.841299845405528,0,0,0.244981598429908,0.0958454710182364,0.919218786610021,0,0,0,0.131886287730194,0.823388792421687,1.04182674111352,0,0,0,0.294628585473668,0,0.559198337475902,0,0.151143120213571,1.73918693221007,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0.776813650941515,0.148442139064825,0,0.608930956624282,0,0.904335843315735,0.705532242814229,0.753999547978053,0.247194967734374,0.289198713839823,0.884610551949874,0.161766849947409,0.883366073841574,0,0,0.585561594023094,0.83778682725382,0.510914110417183,0,0,0.127070227073065,0.299581278809645,0.457500602818626,0.879580464790051,0.347648640384553,0.511430914660661,0,0.324482526135515,0.407357455401265,0.622034853050465,0.252722758433675,0.210441855886474,0.390361328888111,0.459804208866946,0.180062129805349,0.90422890701429,1.08858398642125,1.66547836370305,0.655912071918102,0.517406741478031,0,0.378212160335639,0.175951124163949,0.43839146485515,0.834141747676794,0,0.411564272815887,0.59710280045548,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0,0.154267112887378,0.697601834251224,0.804820204198858,0.817357396570186,0.493679549740441,1.80584210487005,1.4592385718254,1.46199987425332,0.878200461164203,2.14730270016595,0,0.308713837137853,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.994782360205754,0,1.79763881730844,1.08069024937347,0.597423819763102,0,0.571242563048644,0,1.01825663922657,0.193952487167626,0.49095073923223,0.442655759869801,0.442830443938806,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0.648540907100142,0.274561413188081,2.87536413054709,1.86070473834252,0.624075346229121,0.252578877947112,0.179397413521912,0,0.369506380333209,0.37898282354097,0,0.509235257325564,0.469380496577004,1.00503754465089,0.238043640886014,0.195133647857799,1.10344600874334,1.55025282754142,0.318909537314974,0.655453258862952,0.690739927463582,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0.321101179975584,0.117211686592203,0,1.00988370881749,0.94652465824877,0.780877488593277,0.861693590931196,0.955875191810208,0.668396022247182,0.283076530788832,1.21443210502468,0.876767573733936,0.790575555893047,0.321321316421807,0.283880170416537,0.534196811001766,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0.727067458955011,0.712994756769443,0.632073515871632,0,1.03135543248187,2.04263763452273,0.540183282093931,1.03486947026204,1.07168517515796,0.354680467284547,0.713475270408282,0.822745103010605,1.8267896946876,0.23467170806371,1.0591603543191,0,0.32977250588296,0.645857706783622,0.241251699712623,0.477489376012546,0.492422699235184,0.582961673259701,0.18542530201051,1.36696704638282,0.206386867963223,0.555583582109135,1.13021074202815,3.2806614653046,2.0590035588587,0.509935289981566,0.279902904647316,0.967399816630967,1.90934123603023,0.158167996790568,0.406638934253697,0.324016022465404,0.627264888043406,0.655087691238533,0.134864346384821,0.0826534557253359,0.523511883968059,0.518459893167171,0.621339313086926,0,0.149516546043979,0.165458490457098,0.388902376688095,0,0.844780627453891,0.234714477291508,0.2604087696879,0.314578033277133,1.20792060413003,0.288030006257865,2.8441000856536,0.405450430580328,0.616265742988964,1.42912905275575,0.716106782669926,1.98681354781265,2.28371354087941,3.98761723371358,3.12995994839258,2.81965184623499,2.11734988787365,2.72882066071307,4.81059208201647,5.37633750035217,0,0,0.179427713218951,0,0.386379188064381,0.187682475451182,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0.51776031175182,0.207574695168353,0.399024873401031,0,0.972426868273176,0,0,0,0.618105171716683,0.320919209591815,0,0.25347929989024,0.565879024158229,0.280924522409647,0.256100609619477,0.402048282689293,1.42888107384922,0.347652977834566,1.15745532278223,0,0.883193520806384,0.685738504770831,0.887379030796687,0.476872379894642,0.581385666529314,1.12931256498397,0.761531471025089,0.548783918618318,1.8414879800649,0.407412341537585,2.24456908663095,0.593175090620871,0.29551344712669,0.409231043169689,0.464810523557898,0.192906610981141,0.249810577937946,0.701794825336225,0.644613162144895,0.57386499620653,0.661774257358546,0.927471342481686|short_description=p4@Trp53i11}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:277414 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=60bp_to_uc008lft.1_5end | |||
|cluster_id=chr2:93031268..93031274,+ | |||
|description=CAGE_peak_4_at_Trp53i11_5end | |||
|id=chr2:93031268..93031274,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000077,7.11e-12,35;UBERON:0004177,7.69e-12,29;UBERON:0005057,7.69e-12,29;UBERON:0002390,2.76e-11,45;UBERON:0003061,2.76e-11,45;UBERON:0002193,2.91e-10,48;UBERON:0002405,2.91e-10,48;UBERON:0002370,2.12e-08,23;UBERON:0000974,2.12e-08,23;UBERON:0004807,2.12e-08,23;UBERON:0005058,2.12e-08,23;UBERON:0003351,2.12e-08,23;UBERON:0009113,2.12e-08,23;UBERON:0003295,2.12e-08,23;UBERON:0009722,2.12e-08,23;UBERON:0005562,2.12e-08,23;UBERON:0007690,2.12e-08,23;UBERON:0003081,2.60e-08,87;UBERON:0006562,6.11e-08,24;UBERON:0003408,6.11e-08,24;UBERON:0001557,6.11e-08,24;UBERON:0001042,6.11e-08,24;UBERON:0008814,6.11e-08,24;UBERON:0009145,6.11e-08,24;UBERON:0000072,9.02e-07,27 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0.258246646883153,0.281577444303333,0.468129052643987,0,0,0.342401459862411,0.174840804837995,0.666219523631325,1.82227740650843,0.699561878128147,3.15462165358238,4.52477630898938,3.81950686618227,0.425216450755349,0.198581902401771,0.261199789138935,0.319984845586813,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0.194429899074283,0,0,3.18786951509699,1.45072428402269,0.336093799142464,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0.622137673850866,0.945041568321835,0.841299845405528,0,0,0.244981598429908,0.0958454710182364,0.919218786610021,0,0,0,0.131886287730194,0.823388792421687,1.04182674111352,0,0,0,0.294628585473668,0,0.559198337475902,0,0.151143120213571,1.73918693221007,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0.776813650941515,0.148442139064825,0,0.608930956624282,0,0.904335843315735,0.705532242814229,0.753999547978053,0.247194967734374,0.289198713839823,0.884610551949874,0.161766849947409,0.883366073841574,0,0,0.585561594023094,0.83778682725382,0.510914110417183,0,0,0.127070227073065,0.299581278809645,0.457500602818626,0.879580464790051,0.347648640384553,0.511430914660661,0,0.324482526135515,0.407357455401265,0.622034853050465,0.252722758433675,0.210441855886474,0.390361328888111,0.459804208866946,0.180062129805349,0.90422890701429,1.08858398642125,1.66547836370305,0.655912071918102,0.517406741478031,0,0.378212160335639,0.175951124163949,0.43839146485515,0.834141747676794,0,0.411564272815887,0.59710280045548,0,0,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0,0.154267112887378,0.697601834251224,0.804820204198858,0.817357396570186,0.493679549740441,1.80584210487005,1.4592385718254,1.46199987425332,0.878200461164203,2.14730270016595,0,0.308713837137853,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0.994782360205754,0,1.79763881730844,1.08069024937347,0.597423819763102,0,0.571242563048644,0,1.01825663922657,0.193952487167626,0.49095073923223,0.442655759869801,0.442830443938806,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0.648540907100142,0.274561413188081,2.87536413054709,1.86070473834252,0.624075346229121,0.252578877947112,0.179397413521912,0,0.369506380333209,0.37898282354097,0,0.509235257325564,0.469380496577004,1.00503754465089,0.238043640886014,0.195133647857799,1.10344600874334,1.55025282754142,0.318909537314974,0.655453258862952,0.690739927463582,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0.321101179975584,0.117211686592203,0,1.00988370881749,0.94652465824877,0.780877488593277,0.861693590931196,0.955875191810208,0.668396022247182,0.283076530788832,1.21443210502468,0.876767573733936,0.790575555893047,0.321321316421807,0.283880170416537,0.534196811001766,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0.727067458955011,0.712994756769443,0.632073515871632,0,1.03135543248187,2.04263763452273,0.540183282093931,1.03486947026204,1.07168517515796,0.354680467284547,0.713475270408282,0.822745103010605,1.8267896946876,0.23467170806371,1.0591603543191,0,0.32977250588296,0.645857706783622,0.241251699712623,0.477489376012546,0.492422699235184,0.582961673259701,0.18542530201051,1.36696704638282,0.206386867963223,0.555583582109135,1.13021074202815,3.2806614653046,2.0590035588587,0.509935289981566,0.279902904647316,0.967399816630967,1.90934123603023,0.158167996790568,0.406638934253697,0.324016022465404,0.627264888043406,0.655087691238533,0.134864346384821,0.0826534557253359,0.523511883968059,0.518459893167171,0.621339313086926,0,0.149516546043979,0.165458490457098,0.388902376688095,0,0.844780627453891,0.234714477291508,0.2604087696879,0.314578033277133,1.20792060413003,0.288030006257865,2.8441000856536,0.405450430580328,0.616265742988964,1.42912905275575,0.716106782669926,1.98681354781265,2.28371354087941,3.98761723371358,3.12995994839258,2.81965184623499,2.11734988787365,2.72882066071307,4.81059208201647,5.37633750035217,0,0,0.179427713218951,0,0.386379188064381,0.187682475451182,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0.51776031175182,0.207574695168353,0.399024873401031,0,0.972426868273176,0,0,0,0.618105171716683,0.320919209591815,0,0.25347929989024,0.565879024158229,0.280924522409647,0.256100609619477,0.402048282689293,1.42888107384922,0.347652977834566,1.15745532278223,0,0.883193520806384,0.685738504770831,0.887379030796687,0.476872379894642,0.581385666529314,1.12931256498397,0.761531471025089,0.548783918618318,1.8414879800649,0.407412341537585,2.24456908663095,0.593175090620871,0.29551344712669,0.409231043169689,0.464810523557898,0.192906610981141,0.249810577937946,0.701794825336225,0.644613162144895,0.57386499620653,0.661774257358546,0.927471342481686 | |||
|short_description=p4@Trp53i11 | |||
}} |
Revision as of 16:27, 5 August 2015
Short description: | p4@Trp53i11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Trp53i11_5end |
Coexpression cluster: | NA |
Association with transcript: | 60bp_to_uc008lft.1_5end |
EntrezGene: | 277414 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mixed endoderm/mesoderm-derived structure | 7.11e-12 | 35 |
hemopoietic organ | 7.69e-12 | 29 |
immune organ | 7.69e-12 | 29 |
hematopoietic system | 2.76e-11 | 45 |
blood island | 2.76e-11 | 45 |
hemolymphoid system | 2.91e-10 | 48 |
immune system | 2.91e-10 | 48 |
thymus | 2.12e-08 | 23 |
neck | 2.12e-08 | 23 |
respiratory system epithelium | 2.12e-08 | 23 |
hemolymphoid system gland | 2.12e-08 | 23 |
pharyngeal epithelium | 2.12e-08 | 23 |
thymic region | 2.12e-08 | 23 |
pharyngeal gland | 2.12e-08 | 23 |
entire pharyngeal arch endoderm | 2.12e-08 | 23 |
thymus primordium | 2.12e-08 | 23 |
early pharyngeal endoderm | 2.12e-08 | 23 |
lateral plate mesoderm | 2.60e-08 | 87 |
pharynx | 6.11e-08 | 24 |
gland of gut | 6.11e-08 | 24 |
upper respiratory tract | 6.11e-08 | 24 |
chordate pharynx | 6.11e-08 | 24 |
pharyngeal arch system | 6.11e-08 | 24 |
pharyngeal region of foregut | 6.11e-08 | 24 |
segment of respiratory tract | 9.02e-07 | 27 |