FFCP PHASE1:Mm9::chr15:80023483..80023500,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=12|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:80023483..80023500,+|id=chr15:80023483..80023500,+|ontology_enrichment_celltype=CL:0002563!4.88e-11!9;CL:0002251!4.88e-11!9;CL:0000239!2.35e-08!6;CL:0000677!2.35e-08!6;CL:0000212!2.35e-08!6;CL:0000584!2.35e-08!6;CL:0000075!5.65e-07!7|ontology_enrichment_celltype_v019_2=CL:0002563,8.25e-18,9;CL:0002251,8.25e-18,9;CL:0000239,3.26e-13,6;CL:0000677,3.26e-13,6;CL:0000584,3.26e-13,6;CL:0000075,3.27e-11,7;CL:0002076,5.50e-10,15;CL:0000066,6.94e-10,25;CL:0000682,3.09e-07,3;CL:0000223,4.55e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.56e-23!43;UBERON:0005409!3.10e-23!59;UBERON:0000344!3.11e-18!15;UBERON:0001242!3.92e-16!13;UBERON:0000060!3.92e-16!13;UBERON:0001262!3.92e-16!13;UBERON:0004786!3.92e-16!13;UBERON:0004923!1.18e-12!24;UBERON:0003350!4.88e-11!9;UBERON:0004808!4.88e-11!9;UBERON:0001277!4.88e-11!9;UBERON:0000485!1.40e-08!11;UBERON:0004119!2.19e-07!130;UBERON:0000925!2.19e-07!130;UBERON:0006595!2.19e-07!130;UBERON:0001007!4.32e-07!128;UBERON:0001555!4.32e-07!128;UBERON:0007026!4.32e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.67e-55,31;UBERON:0005409,1.53e-41,47;UBERON:0000344,3.47e-30,15;UBERON:0001242,1.44e-26,13;UBERON:0001262,1.44e-26,13;UBERON:0004786,1.44e-26,13;UBERON:0004923,1.38e-22,24;UBERON:0003350,8.25e-18,9;UBERON:0004808,8.25e-18,9;UBERON:0001277,8.25e-18,9;UBERON:0004119,3.35e-15,118;UBERON:0000925,3.35e-15,118;UBERON:0006595,3.35e-15,118;UBERON:0001007,1.62e-14,116;UBERON:0001555,1.62e-14,116;UBERON:0007026,1.62e-14,116;UBERON:0000485,2.99e-14,11;UBERON:0004921,1.20e-12,114;UBERON:0002108,5.40e-10,4;UBERON:0000331,5.55e-08,3;UBERON:0002116,5.55e-08,3;UBERON:0001204,5.55e-08,3;UBERON:0001168,5.55e-08,3|phase1_expression=0,10.4692622291808,7.27998783023258,17.2404600444893,14.0250804384977,6.04365378882803,5.37309073369709,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,7.35965144849671,5.04700418347774,7.46501553349526,9.47676391549965,7.32602191132023,30.9738173713889,19.1542898617547,8.20402889424627,0,0,0,2.02196133825892,2.32728503501889,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,3.4255163915718,0,0,0,0,0,0,0,0,8.40462890296871,0,0,0,0,0,7.45567044872489,0,0,16.3492515333498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.059365600477,13.4869788998408,0,0,2.19074684247559,4.03367049246685,4.89231696458715,8.94060442729028,11.8632265386128,6.58795818896044,9.29940272560997,3.38226002469956,5.06906626509712,12.5834717211591,15.7780776408527,11.7493351220077,0,0,0,0.203651327845314,0,0.0701358198903186,0,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,2.06742634534577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17335854031855,0,0,0,0,0,0,0,10.2018292820448,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.648032044930808,0,1.31017538247707,0.269728692769641,0.578574190077352,1.57053565190418,9.85073797017626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0.618105171716683,0.320919209591815,1.01078884705519,0.25347929989024,0.377252682772152,0.280924522409647,0.256100609619477,0.287177344778066,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.282328141245992,0.25384382367503,0.182927972872773,0.263069711437843,0,0,0.237270036248348,0.29551344712669,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.644613162144895,0,0,0|short_description=p@chr15:80023483..80023500,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:80023483..80023500,+ | |||
|description=CAGE_peak_at_chr15:80023483..80023500,+ | |||
|id=chr15:80023483..80023500,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.88e-11!9;CL:0002251!4.88e-11!9;CL:0000239!2.35e-08!6;CL:0000677!2.35e-08!6;CL:0000212!2.35e-08!6;CL:0000584!2.35e-08!6;CL:0000075!5.65e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.25e-18,9;CL:0002251,8.25e-18,9;CL:0000239,3.26e-13,6;CL:0000677,3.26e-13,6;CL:0000584,3.26e-13,6;CL:0000075,3.27e-11,7;CL:0002076,5.50e-10,15;CL:0000066,6.94e-10,25;CL:0000682,3.09e-07,3;CL:0000223,4.55e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.56e-23!43;UBERON:0005409!3.10e-23!59;UBERON:0000344!3.11e-18!15;UBERON:0001242!3.92e-16!13;UBERON:0000060!3.92e-16!13;UBERON:0001262!3.92e-16!13;UBERON:0004786!3.92e-16!13;UBERON:0004923!1.18e-12!24;UBERON:0003350!4.88e-11!9;UBERON:0004808!4.88e-11!9;UBERON:0001277!4.88e-11!9;UBERON:0000485!1.40e-08!11;UBERON:0004119!2.19e-07!130;UBERON:0000925!2.19e-07!130;UBERON:0006595!2.19e-07!130;UBERON:0001007!4.32e-07!128;UBERON:0001555!4.32e-07!128;UBERON:0007026!4.32e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.67e-55,31;UBERON:0005409,1.53e-41,47;UBERON:0000344,3.47e-30,15;UBERON:0001242,1.44e-26,13;UBERON:0001262,1.44e-26,13;UBERON:0004786,1.44e-26,13;UBERON:0004923,1.38e-22,24;UBERON:0003350,8.25e-18,9;UBERON:0004808,8.25e-18,9;UBERON:0001277,8.25e-18,9;UBERON:0004119,3.35e-15,118;UBERON:0000925,3.35e-15,118;UBERON:0006595,3.35e-15,118;UBERON:0001007,1.62e-14,116;UBERON:0001555,1.62e-14,116;UBERON:0007026,1.62e-14,116;UBERON:0000485,2.99e-14,11;UBERON:0004921,1.20e-12,114;UBERON:0002108,5.40e-10,4;UBERON:0000331,5.55e-08,3;UBERON:0002116,5.55e-08,3;UBERON:0001204,5.55e-08,3;UBERON:0001168,5.55e-08,3 | |||
|phase1_expression=0,10.4692622291808,7.27998783023258,17.2404600444893,14.0250804384977,6.04365378882803,5.37309073369709,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,7.35965144849671,5.04700418347774,7.46501553349526,9.47676391549965,7.32602191132023,30.9738173713889,19.1542898617547,8.20402889424627,0,0,0,2.02196133825892,2.32728503501889,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0,0,0,3.4255163915718,0,0,0,0,0,0,0,0,8.40462890296871,0,0,0,0,0,7.45567044872489,0,0,16.3492515333498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.059365600477,13.4869788998408,0,0,2.19074684247559,4.03367049246685,4.89231696458715,8.94060442729028,11.8632265386128,6.58795818896044,9.29940272560997,3.38226002469956,5.06906626509712,12.5834717211591,15.7780776408527,11.7493351220077,0,0,0,0.203651327845314,0,0.0701358198903186,0,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,2.06742634534577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17335854031855,0,0,0,0,0,0,0,10.2018292820448,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.648032044930808,0,1.31017538247707,0.269728692769641,0.578574190077352,1.57053565190418,9.85073797017626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0.618105171716683,0.320919209591815,1.01078884705519,0.25347929989024,0.377252682772152,0.280924522409647,0.256100609619477,0.287177344778066,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.282328141245992,0.25384382367503,0.182927972872773,0.263069711437843,0,0,0.237270036248348,0.29551344712669,0,0.309873682371932,0.192906610981141,0,0.233931608445408,0.644613162144895,0,0,0 | |||
|short_description=p@chr15:80023483..80023500,+ | |||
}} |
Latest revision as of 15:59, 5 August 2015
Short description: | p@chr15:80023483..80023500, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:80023483..80023500, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.25e-18 | 9 |
epithelial cell of alimentary canal | 8.25e-18 | 9 |
brush border epithelial cell | 3.26e-13 | 6 |
gut absorptive cell | 3.26e-13 | 6 |
enterocyte | 3.26e-13 | 6 |
columnar/cuboidal epithelial cell | 3.27e-11 | 7 |
endo-epithelial cell | 5.50e-10 | 15 |
epithelial cell | 6.94e-10 | 25 |
M cell of gut | 3.09e-07 | 3 |
endodermal cell | 4.55e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.67e-55 | 31 |
gastrointestinal system | 1.53e-41 | 47 |
mucosa | 3.47e-30 | 15 |
intestinal mucosa | 1.44e-26 | 13 |
wall of intestine | 1.44e-26 | 13 |
gastrointestinal system mucosa | 1.44e-26 | 13 |
organ component layer | 1.38e-22 | 24 |
epithelium of mucosa | 8.25e-18 | 9 |
gastrointestinal system epithelium | 8.25e-18 | 9 |
intestinal epithelium | 8.25e-18 | 9 |
endoderm-derived structure | 3.35e-15 | 118 |
endoderm | 3.35e-15 | 118 |
presumptive endoderm | 3.35e-15 | 118 |
digestive system | 1.62e-14 | 116 |
digestive tract | 1.62e-14 | 116 |
primitive gut | 1.62e-14 | 116 |
simple columnar epithelium | 2.99e-14 | 11 |
subdivision of digestive tract | 1.20e-12 | 114 |
small intestine | 5.40e-10 | 4 |
ileal mucosa | 5.55e-08 | 3 |
ileum | 5.55e-08 | 3 |
mucosa of small intestine | 5.55e-08 | 3 |
wall of small intestine | 5.55e-08 | 3 |