FFCP PHASE1:Mm9::chr15:80022592..80022612,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:80022592..80022612,+ | |||
|description=CAGE_peak_at_chr15:80022592..80022612,+ | |description=CAGE_peak_at_chr15:80022592..80022612,+ | ||
|id=chr15:80022592..80022612,+ | |id=chr15:80022592..80022612,+ | ||
|ontology_enrichment_celltype=CL:0002563!5.02e-12!9;CL:0002251!5.02e-12!9;CL:0000239!2.33e-08!6;CL:0000677!2.33e-08!6;CL:0000212!2.33e-08!6;CL:0000584!2.33e-08!6;CL:0000075!5.50e-07!7 | |ontology_enrichment_celltype=CL:0002563!5.02e-12!9;CL:0002251!5.02e-12!9;CL:0000239!2.33e-08!6;CL:0000677!2.33e-08!6;CL:0000212!2.33e-08!6;CL:0000584!2.33e-08!6;CL:0000075!5.50e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.45e-20,9;CL:0002251,1.45e-20,9;CL:0000239,6.63e-14,6;CL:0000677,6.63e-14,6;CL:0000584,6.63e-14,6;CL:0000075,8.11e-12,7;CL:0002076,1.23e-11,15;CL:0000066,1.81e-11,25;CL:0000223,2.70e-08,20;CL:0002250,3.06e-08,3;CL:0000682,9.58e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.57e-22!43;UBERON:0005409!8.06e-21!59;UBERON:0000344!1.30e-19!15;UBERON:0001242!3.96e-17!13;UBERON:0000060!3.96e-17!13;UBERON:0001262!3.96e-17!13;UBERON:0004786!3.96e-17!13;UBERON:0004923!3.05e-13!24;UBERON:0003350!5.02e-12!9;UBERON:0004808!5.02e-12!9;UBERON:0001277!5.02e-12!9;UBERON:0000485!2.25e-09!11 | |ontology_enrichment_uberon=UBERON:0000160!1.57e-22!43;UBERON:0005409!8.06e-21!59;UBERON:0000344!1.30e-19!15;UBERON:0001242!3.96e-17!13;UBERON:0000060!3.96e-17!13;UBERON:0001262!3.96e-17!13;UBERON:0004786!3.96e-17!13;UBERON:0004923!3.05e-13!24;UBERON:0003350!5.02e-12!9;UBERON:0004808!5.02e-12!9;UBERON:0001277!5.02e-12!9;UBERON:0000485!2.25e-09!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.36e-59,31;UBERON:0005409,4.94e-40,47;UBERON:0000344,2.10e-34,15;UBERON:0001242,7.25e-30,13;UBERON:0001262,7.25e-30,13;UBERON:0004786,7.25e-30,13;UBERON:0004923,9.17e-23,24;UBERON:0003350,1.45e-20,9;UBERON:0004808,1.45e-20,9;UBERON:0001277,1.45e-20,9;UBERON:0000485,1.67e-16,11;UBERON:0001007,1.31e-14,116;UBERON:0001555,1.31e-14,116;UBERON:0007026,1.31e-14,116;UBERON:0004119,3.07e-14,118;UBERON:0000925,3.07e-14,118;UBERON:0006595,3.07e-14,118;UBERON:0004921,1.68e-12,114;UBERON:0002108,1.26e-10,4;UBERON:0000331,2.45e-08,3;UBERON:0002116,2.45e-08,3;UBERON:0001204,2.45e-08,3;UBERON:0001168,2.45e-08,3 | |||
|phase1_expression=0,7.32848356042658,5.0049916332849,16.6355316218757,11.520601788766,6.04365378882803,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,9.43955294481099,7.34109699414944,9.18771142584032,6.46142994238612,6.24866574789078,27.3633724017178,18.146169342715,4.8780712344167,0,0,0,13.2871745085586,7.14808975041517,8.98345167554424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,9.31958806090611,0,0,8.68553987709211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5384264512871,7.66906643324278,0,0,1.28867461322093,4.84040459096022,3.55804870151792,8.17970192284004,6.64340686162316,6.91735609840846,5.7807098024062,4.37704238490532,6.23885078781184,5.39291645192533,8.86166004486246,10.7536287557358,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.252946148497029,0.738050739898011,0.31399745568275,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06742634534577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,9.32738677215522,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0,0.655087691238533,0.269728692769641,0,0.26175594198403,8.03612834409116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0,0.320919209591815,0.505394423527595,0.25347929989024,0,0.468207537349412,0.384150914429216,0.17230640686684,0,0.231768651889711,0.38581844092741,0.412085900803307,0.147198920134397,0.685738504770831,0.354951612318675,0.715308569841963,0.436039249896986,0.564656282491984,0.25384382367503,0.365855945745545,0,0.814824683075171,0.561142271657738,0.118635018124174,0.394017929502254,0,0.464810523557898,0.385813221962283,0,0.701794825336225,0.214871054048298,0,0,0 | |phase1_expression=0,7.32848356042658,5.0049916332849,16.6355316218757,11.520601788766,6.04365378882803,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,9.43955294481099,7.34109699414944,9.18771142584032,6.46142994238612,6.24866574789078,27.3633724017178,18.146169342715,4.8780712344167,0,0,0,13.2871745085586,7.14808975041517,8.98345167554424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,2.05530983494308,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,9.31958806090611,0,0,8.68553987709211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5384264512871,7.66906643324278,0,0,1.28867461322093,4.84040459096022,3.55804870151792,8.17970192284004,6.64340686162316,6.91735609840846,5.7807098024062,4.37704238490532,6.23885078781184,5.39291645192533,8.86166004486246,10.7536287557358,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.252946148497029,0.738050739898011,0.31399745568275,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06742634534577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,9.32738677215522,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.540026704109006,0,0.655087691238533,0.269728692769641,0,0.26175594198403,8.03612834409116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0,0.320919209591815,0.505394423527595,0.25347929989024,0,0.468207537349412,0.384150914429216,0.17230640686684,0,0.231768651889711,0.38581844092741,0.412085900803307,0.147198920134397,0.685738504770831,0.354951612318675,0.715308569841963,0.436039249896986,0.564656282491984,0.25384382367503,0.365855945745545,0,0.814824683075171,0.561142271657738,0.118635018124174,0.394017929502254,0,0.464810523557898,0.385813221962283,0,0.701794825336225,0.214871054048298,0,0,0 | ||
|short_description=p@chr15:80022592..80022612,+ | |short_description=p@chr15:80022592..80022612,+ | ||
}} | }} |
Latest revision as of 15:59, 5 August 2015
Short description: | p@chr15:80022592..80022612, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:80022592..80022612, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.45e-20 | 9 |
epithelial cell of alimentary canal | 1.45e-20 | 9 |
brush border epithelial cell | 6.63e-14 | 6 |
gut absorptive cell | 6.63e-14 | 6 |
enterocyte | 6.63e-14 | 6 |
columnar/cuboidal epithelial cell | 8.11e-12 | 7 |
endo-epithelial cell | 1.23e-11 | 15 |
epithelial cell | 1.81e-11 | 25 |
endodermal cell | 2.70e-08 | 20 |
intestinal crypt stem cell | 3.06e-08 | 3 |
M cell of gut | 9.58e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.36e-59 | 31 |
gastrointestinal system | 4.94e-40 | 47 |
mucosa | 2.10e-34 | 15 |
intestinal mucosa | 7.25e-30 | 13 |
wall of intestine | 7.25e-30 | 13 |
gastrointestinal system mucosa | 7.25e-30 | 13 |
organ component layer | 9.17e-23 | 24 |
epithelium of mucosa | 1.45e-20 | 9 |
gastrointestinal system epithelium | 1.45e-20 | 9 |
intestinal epithelium | 1.45e-20 | 9 |
simple columnar epithelium | 1.67e-16 | 11 |
digestive system | 1.31e-14 | 116 |
digestive tract | 1.31e-14 | 116 |
primitive gut | 1.31e-14 | 116 |
endoderm-derived structure | 3.07e-14 | 118 |
endoderm | 3.07e-14 | 118 |
presumptive endoderm | 3.07e-14 | 118 |
subdivision of digestive tract | 1.68e-12 | 114 |
small intestine | 1.26e-10 | 4 |
ileal mucosa | 2.45e-08 | 3 |
ileum | 2.45e-08 | 3 |
mucosa of small intestine | 2.45e-08 | 3 |
wall of small intestine | 2.45e-08 | 3 |