FFCP PHASE1:Mm9::chr15:78681407..78681425,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=140 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:78681407..78681425,- | |||
|description=CAGE_peak_at_chr15:78681407..78681425,- | |description=CAGE_peak_at_chr15:78681407..78681425,- | ||
|id=chr15:78681407..78681425,- | |id=chr15:78681407..78681425,- | ||
|ontology_enrichment_celltype=CL:0002563!7.25e-09!9;CL:0002251!7.25e-09!9;CL:0002250!1.06e-07!3;CL:0000473!1.52e-07!3;CL:0000627!1.52e-07!3;CL:0000682!1.52e-07!3 | |ontology_enrichment_celltype=CL:0002563!7.25e-09!9;CL:0002251!7.25e-09!9;CL:0002250!1.06e-07!3;CL:0000473!1.52e-07!3;CL:0000627!1.52e-07!3;CL:0000682!1.52e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002250,4.17e-07,3;CL:0000682,8.37e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.16e-28!43;UBERON:0005409!1.66e-26!59;UBERON:0000344!8.20e-17!15;UBERON:0001242!5.20e-13!13;UBERON:0000060!5.20e-13!13;UBERON:0001262!5.20e-13!13;UBERON:0004786!5.20e-13!13;UBERON:0004923!1.93e-11!24;UBERON:0001007!1.87e-10!128;UBERON:0001555!1.87e-10!128;UBERON:0007026!1.87e-10!128;UBERON:0004119!3.49e-10!130;UBERON:0000925!3.49e-10!130;UBERON:0006595!3.49e-10!130;UBERON:0003350!7.25e-09!9;UBERON:0004808!7.25e-09!9;UBERON:0001277!7.25e-09!9;UBERON:0004921!8.81e-09!126;UBERON:0004185!8.81e-09!126;UBERON:0000485!4.10e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.69e-28,31;UBERON:0005409,1.41e-20,47;UBERON:0000344,1.93e-14,15;UBERON:0002108,3.19e-11,4;UBERON:0001962,4.69e-10,2;UBERON:0001961,4.69e-10,2;UBERON:0001744,4.69e-10,2;UBERON:0001007,2.44e-09,116;UBERON:0001555,2.44e-09,116;UBERON:0007026,2.44e-09,116;UBERON:0004119,3.90e-09,118;UBERON:0000925,3.90e-09,118;UBERON:0006595,3.90e-09,118;UBERON:0001242,7.29e-09,13;UBERON:0001262,7.29e-09,13;UBERON:0004786,7.29e-09,13;UBERON:0004923,9.26e-09,24;UBERON:0004921,4.37e-07,114;UBERON:0000331,5.15e-07,3;UBERON:0002116,5.15e-07,3;UBERON:0001204,5.15e-07,3;UBERON:0001168,5.15e-07,3;UBERON:0002465,5.52e-07,3 | |||
|phase1_expression=0,0,0,0.60492842261366,0,0.839396359559449,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,1.37645568640302,1.14846392823004,0.86152399231815,1.07735616342945,2.28028103347649,0,1.10865255327652,0,0,0,0.577703239502549,1.99481574430191,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,14.3055950916811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,2.90895623329899,0,0.232236671860439,0.257734922644187,1.00841762311671,0.889512175379481,1.14135375667535,9.01605216934572,0.329397909448022,0.502670417600539,0.994782360205754,0.38992817423824,19.7740269903929,2.16138049874694,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3229268512716,0,0,0,0,0,0,0,0,0,0,23.8667654503778,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0,0,0.0846146078916765,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0.60492842261366,0,0.839396359559449,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,1.37645568640302,1.14846392823004,0.86152399231815,1.07735616342945,2.28028103347649,0,1.10865255327652,0,0,0,0.577703239502549,1.99481574430191,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,14.3055950916811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,2.90895623329899,0,0.232236671860439,0.257734922644187,1.00841762311671,0.889512175379481,1.14135375667535,9.01605216934572,0.329397909448022,0.502670417600539,0.994782360205754,0.38992817423824,19.7740269903929,2.16138049874694,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3229268512716,0,0,0,0,0,0,0,0,0,0,23.8667654503778,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0.354951612318675,0,0,0,0.0846146078916765,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:78681407..78681425,- | |short_description=p@chr15:78681407..78681425,- | ||
}} | }} |
Latest revision as of 14:48, 5 August 2015
Short description: | p@chr15:78681407..78681425, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:78681407..78681425, - |
Coexpression cluster: | MCL_coexpression_mm9:140 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 4.17e-07 | 3 |
M cell of gut | 8.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.69e-28 | 31 |
gastrointestinal system | 1.41e-20 | 47 |
mucosa | 1.93e-14 | 15 |
small intestine | 3.19e-11 | 4 |
gut-associated lymphoid tissue | 4.69e-10 | 2 |
mucosa-associated lymphoid tissue | 4.69e-10 | 2 |
lymphoid tissue | 4.69e-10 | 2 |
digestive system | 2.44e-09 | 116 |
digestive tract | 2.44e-09 | 116 |
primitive gut | 2.44e-09 | 116 |
endoderm-derived structure | 3.90e-09 | 118 |
endoderm | 3.90e-09 | 118 |
presumptive endoderm | 3.90e-09 | 118 |
intestinal mucosa | 7.29e-09 | 13 |
wall of intestine | 7.29e-09 | 13 |
gastrointestinal system mucosa | 7.29e-09 | 13 |
organ component layer | 9.26e-09 | 24 |
subdivision of digestive tract | 4.37e-07 | 114 |
ileal mucosa | 5.15e-07 | 3 |
ileum | 5.15e-07 | 3 |
mucosa of small intestine | 5.15e-07 | 3 |
wall of small intestine | 5.15e-07 | 3 |
lymphoid system | 5.52e-07 | 3 |