FFCP PHASE1:Mm9::chr7:82731147..82731158,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=909|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:82731147..82731158,+|id=chr7:82731147..82731158,+|ontology_enrichment_celltype=CL:0000988!2.34e-09!32;CL:0002032!2.34e-09!32;CL:0000037!2.34e-09!32;CL:0000566!2.34e-09!32;CL:0000837!2.34e-09!32|ontology_enrichment_celltype_v019_2=CL:0000988,1.17e-10,32;CL:0002032,1.17e-10,32;CL:0000037,1.17e-10,32;CL:0000837,1.17e-10,32;CL:0000049,5.57e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.23e-07,3;DOID:4045,1.23e-07,3|ontology_enrichment_uberon=UBERON:0002193!1.06e-17!48;UBERON:0002390!4.64e-16!45;UBERON:0003061!4.64e-16!45;UBERON:0004177!1.35e-14!29;UBERON:0002405!6.15e-14!70;UBERON:0002370!5.11e-11!23;UBERON:0000974!5.11e-11!23;UBERON:0004807!5.11e-11!23;UBERON:0005058!5.11e-11!23;UBERON:0003351!5.11e-11!23;UBERON:0009113!5.11e-11!23;UBERON:0003295!5.11e-11!23;UBERON:0009722!5.11e-11!23;UBERON:0005562!5.11e-11!23;UBERON:0007690!5.11e-11!23;UBERON:0006562!2.86e-10!24;UBERON:0003408!2.86e-10!24;UBERON:0001557!2.86e-10!24;UBERON:0001042!2.86e-10!24;UBERON:0008814!2.86e-10!24;UBERON:0009145!2.86e-10!24;UBERON:0005057!5.59e-10!51;UBERON:0000065!4.79e-09!41;UBERON:0001004!1.27e-08!42;UBERON:0000072!2.19e-08!27;UBERON:0003081!3.08e-08!88|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.03e-19,48;UBERON:0002405,2.03e-19,48;UBERON:0002390,3.70e-19,45;UBERON:0003061,3.70e-19,45;UBERON:0004177,2.06e-15,29;UBERON:0005057,2.06e-15,29;UBERON:0000077,4.58e-12,35;UBERON:0002370,8.00e-12,23;UBERON:0000974,8.00e-12,23;UBERON:0004807,8.00e-12,23;UBERON:0005058,8.00e-12,23;UBERON:0003351,8.00e-12,23;UBERON:0009113,8.00e-12,23;UBERON:0003295,8.00e-12,23;UBERON:0009722,8.00e-12,23;UBERON:0005562,8.00e-12,23;UBERON:0007690,8.00e-12,23;UBERON:0006562,3.31e-11,24;UBERON:0003408,3.31e-11,24;UBERON:0001557,3.31e-11,24;UBERON:0001042,3.31e-11,24;UBERON:0008814,3.31e-11,24;UBERON:0009145,3.31e-11,24;UBERON:0000072,1.24e-09,27;UBERON:0003081,7.27e-09,87;UBERON:0000065,2.53e-07,41;UBERON:0001004,4.52e-07,42;UBERON:0000926,5.05e-07,120;UBERON:0004120,5.05e-07,120;UBERON:0006603,5.05e-07,120|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0.563154888606667,0.468129052643987,0.34243593645101,0,4.79362043807376,0.786783621770977,0.999329285446988,0.809901069559304,1.39912375625629,5.20512572841092,5.89592064504677,3.81950686618227,0.255129870453209,1.09220046320974,1.30599894569468,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,11.7188856606334,5.4693474116666,14.1351410872926,19.4116391050235,11.6117732442936,10.6812277666854,0,0,0,0,0,0,0,0,0,5.20126078778983,6.5282592781021,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,4.40194402200192,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0,4.42305275974937,0,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,8.2672435909085,0.599902730993408,5.20987930999565,0,0,0,0,0,0,0,0,1.24406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,2.1066395619397,1.02939162845886,2.55747149456033,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,1.01850340712568,0.287696137450811,0.486405680325106,0,0,0.372140947668503,0,0,0,0,1.10851914099963,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0.44292937929755,0.318909537314974,0.983179888294428,1.38147985492716,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.325773918707152,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0,1.53783792718067,0.206386867963223,0.370389054739423,1.50694765603753,1.23024804948923,2.0590035588587,15.6380155594347,14.2750481370131,10.7795979567451,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,3.16011120628178,1.01362607645082,0.308132871494482,0.909445760844565,2.50637373934474,2.38417625737518,2.40390899039938,2.65841148914239,3.23092639834072,5.56309688581499,2.92395936896837,4.97035191772737,3.84847366561318,7.48012173962041,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0.377252682772152,0.0936415074698824,0.128050304809739,0.17230640686684,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0.220591419119515,0.463735671240843|short_description=p@chr7:82731147..82731158,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=909 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:82731147..82731158,+ | |||
|description=CAGE_peak_at_chr7:82731147..82731158,+ | |||
|id=chr7:82731147..82731158,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.34e-09!32;CL:0002032!2.34e-09!32;CL:0000037!2.34e-09!32;CL:0000566!2.34e-09!32;CL:0000837!2.34e-09!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.17e-10,32;CL:0002032,1.17e-10,32;CL:0000037,1.17e-10,32;CL:0000837,1.17e-10,32;CL:0000049,5.57e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.23e-07,3;DOID:4045,1.23e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.06e-17!48;UBERON:0002390!4.64e-16!45;UBERON:0003061!4.64e-16!45;UBERON:0004177!1.35e-14!29;UBERON:0002405!6.15e-14!70;UBERON:0002370!5.11e-11!23;UBERON:0000974!5.11e-11!23;UBERON:0004807!5.11e-11!23;UBERON:0005058!5.11e-11!23;UBERON:0003351!5.11e-11!23;UBERON:0009113!5.11e-11!23;UBERON:0003295!5.11e-11!23;UBERON:0009722!5.11e-11!23;UBERON:0005562!5.11e-11!23;UBERON:0007690!5.11e-11!23;UBERON:0006562!2.86e-10!24;UBERON:0003408!2.86e-10!24;UBERON:0001557!2.86e-10!24;UBERON:0001042!2.86e-10!24;UBERON:0008814!2.86e-10!24;UBERON:0009145!2.86e-10!24;UBERON:0005057!5.59e-10!51;UBERON:0000065!4.79e-09!41;UBERON:0001004!1.27e-08!42;UBERON:0000072!2.19e-08!27;UBERON:0003081!3.08e-08!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.03e-19,48;UBERON:0002405,2.03e-19,48;UBERON:0002390,3.70e-19,45;UBERON:0003061,3.70e-19,45;UBERON:0004177,2.06e-15,29;UBERON:0005057,2.06e-15,29;UBERON:0000077,4.58e-12,35;UBERON:0002370,8.00e-12,23;UBERON:0000974,8.00e-12,23;UBERON:0004807,8.00e-12,23;UBERON:0005058,8.00e-12,23;UBERON:0003351,8.00e-12,23;UBERON:0009113,8.00e-12,23;UBERON:0003295,8.00e-12,23;UBERON:0009722,8.00e-12,23;UBERON:0005562,8.00e-12,23;UBERON:0007690,8.00e-12,23;UBERON:0006562,3.31e-11,24;UBERON:0003408,3.31e-11,24;UBERON:0001557,3.31e-11,24;UBERON:0001042,3.31e-11,24;UBERON:0008814,3.31e-11,24;UBERON:0009145,3.31e-11,24;UBERON:0000072,1.24e-09,27;UBERON:0003081,7.27e-09,87;UBERON:0000065,2.53e-07,41;UBERON:0001004,4.52e-07,42;UBERON:0000926,5.05e-07,120;UBERON:0004120,5.05e-07,120;UBERON:0006603,5.05e-07,120 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0.563154888606667,0.468129052643987,0.34243593645101,0,4.79362043807376,0.786783621770977,0.999329285446988,0.809901069559304,1.39912375625629,5.20512572841092,5.89592064504677,3.81950686618227,0.255129870453209,1.09220046320974,1.30599894569468,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,11.7188856606334,5.4693474116666,14.1351410872926,19.4116391050235,11.6117732442936,10.6812277666854,0,0,0,0,0,0,0,0,0,5.20126078778983,6.5282592781021,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,4.40194402200192,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0,4.42305275974937,0,0.441683036920787,0.484875253135222,0,0,0,0.255457055208591,8.2672435909085,0.599902730993408,5.20987930999565,0,0,0,0,0,0,0,0,1.24406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,2.1066395619397,1.02939162845886,2.55747149456033,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0.898819408654221,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0.196558995113203,0.224862112384854,0.202860121388503,0.241177159752417,1.01850340712568,0.287696137450811,0.486405680325106,0,0,0.372140947668503,0,0,0,0,1.10851914099963,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0.44292937929755,0.318909537314974,0.983179888294428,1.38147985492716,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.325773918707152,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0,1.53783792718067,0.206386867963223,0.370389054739423,1.50694765603753,1.23024804948923,2.0590035588587,15.6380155594347,14.2750481370131,10.7795979567451,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,3.16011120628178,1.01362607645082,0.308132871494482,0.909445760844565,2.50637373934474,2.38417625737518,2.40390899039938,2.65841148914239,3.23092639834072,5.56309688581499,2.92395936896837,4.97035191772737,3.84847366561318,7.48012173962041,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0.377252682772152,0.0936415074698824,0.128050304809739,0.17230640686684,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr7:82731147..82731158,+ | |||
}} |
Latest revision as of 14:14, 5 August 2015
Short description: | p@chr7:82731147..82731158, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:82731147..82731158, + |
Coexpression cluster: | MCL_coexpression_mm9:909 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.17e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.17e-10 | 32 |
hematopoietic stem cell | 1.17e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.17e-10 | 32 |
common myeloid progenitor | 5.57e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.03e-19 | 48 |
immune system | 2.03e-19 | 48 |
hematopoietic system | 3.70e-19 | 45 |
blood island | 3.70e-19 | 45 |
hemopoietic organ | 2.06e-15 | 29 |
immune organ | 2.06e-15 | 29 |
mixed endoderm/mesoderm-derived structure | 4.58e-12 | 35 |
thymus | 8.00e-12 | 23 |
neck | 8.00e-12 | 23 |
respiratory system epithelium | 8.00e-12 | 23 |
hemolymphoid system gland | 8.00e-12 | 23 |
pharyngeal epithelium | 8.00e-12 | 23 |
thymic region | 8.00e-12 | 23 |
pharyngeal gland | 8.00e-12 | 23 |
entire pharyngeal arch endoderm | 8.00e-12 | 23 |
thymus primordium | 8.00e-12 | 23 |
early pharyngeal endoderm | 8.00e-12 | 23 |
pharynx | 3.31e-11 | 24 |
gland of gut | 3.31e-11 | 24 |
upper respiratory tract | 3.31e-11 | 24 |
chordate pharynx | 3.31e-11 | 24 |
pharyngeal arch system | 3.31e-11 | 24 |
pharyngeal region of foregut | 3.31e-11 | 24 |
segment of respiratory tract | 1.24e-09 | 27 |
lateral plate mesoderm | 7.27e-09 | 87 |
respiratory tract | 2.53e-07 | 41 |
respiratory system | 4.52e-07 | 42 |
mesoderm | 5.05e-07 | 120 |
mesoderm-derived structure | 5.05e-07 | 120 |
presumptive mesoderm | 5.05e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.23e-07 | 3 |
muscle cancer | 1.23e-07 | 3 |