FFCP PHASE1:Mm9::chr18:21275368..21275371,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:21275368..21275371,- | |||
|description=CAGE_peak_at_chr18:21275368..21275371,- | |description=CAGE_peak_at_chr18:21275368..21275371,- | ||
|id=chr18:21275368..21275371,- | |id=chr18:21275368..21275371,- | ||
|ontology_enrichment_celltype=CL:0000239!4.91e-17!6;CL:0000677!4.91e-17!6;CL:0000212!4.91e-17!6;CL:0000584!4.91e-17!6;CL:0000075!1.42e-14!7;CL:0000473!4.54e-13!3;CL:0000627!4.54e-13!3;CL:0000682!4.54e-13!3;CL:0002563!2.76e-11!9;CL:0002251!2.76e-11!9;CL:0000066!1.85e-09!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.36e-24,3;CL:0000239,9.30e-22,6;CL:0000677,9.30e-22,6;CL:0000584,9.30e-22,6;CL:0000075,1.03e-18,7;CL:0000066,2.12e-15,25;CL:0002563,1.22e-14,9;CL:0002251,1.22e-14,9;CL:0000473,6.29e-11,7;CL:0002076,6.56e-09,15;CL:0000223,9.65e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.34e-25!15;UBERON:0001242!8.87e-19!13;UBERON:0000060!8.87e-19!13;UBERON:0001262!8.87e-19!13;UBERON:0004786!8.87e-19!13;UBERON:0004923!2.21e-15!24;UBERON:0000160!2.22e-15!43;UBERON:0005409!3.46e-12!59;UBERON:0003350!2.76e-11!9;UBERON:0004808!2.76e-11!9;UBERON:0001277!2.76e-11!9;UBERON:0001962!1.51e-09!2;UBERON:0001961!1.51e-09!2;UBERON:0001744!1.51e-09!2;UBERON:0000485!3.46e-09!11;UBERON:0001007!9.57e-07!128;UBERON:0001555!9.57e-07!128;UBERON:0007026!9.57e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.51e-33,15;UBERON:0001242,9.89e-22,13;UBERON:0001262,9.89e-22,13;UBERON:0004786,9.89e-22,13;UBERON:0004923,7.66e-21,24;UBERON:0001962,1.55e-17,2;UBERON:0001961,1.55e-17,2;UBERON:0001744,1.55e-17,2;UBERON:0003350,1.22e-14,9;UBERON:0004808,1.22e-14,9;UBERON:0001277,1.22e-14,9;UBERON:0000485,4.84e-12,11;UBERON:0002465,5.11e-12,3;UBERON:0003199,1.19e-09,1;UBERON:0000160,4.88e-09,31 | |||
|phase1_expression=0,4.88565570695105,10.0099832665698,0.60492842261366,0,2.85394762250213,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11975752938901,6.8822784320151,4.01962374880514,3.4460959692726,3.66301095566011,0.380046838912748,0,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,0.793351699990633,0,0,0,0,0,0.190225626112559,0.474529061544512,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,4.88565570695105,10.0099832665698,0.60492842261366,0,2.85394762250213,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11975752938901,6.8822784320151,4.01962374880514,3.4460959692726,3.66301095566011,0.380046838912748,0,1.77384408524244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,0.793351699990633,0,0,0,0,0,0.190225626112559,0.474529061544512,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:21275368..21275371,- | |short_description=p@chr18:21275368..21275371,- | ||
}} | }} |
Latest revision as of 14:11, 5 August 2015
Short description: | p@chr18:21275368..21275371, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:21275368..21275371, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.36e-24 | 3 |
brush border epithelial cell | 9.30e-22 | 6 |
gut absorptive cell | 9.30e-22 | 6 |
enterocyte | 9.30e-22 | 6 |
columnar/cuboidal epithelial cell | 1.03e-18 | 7 |
epithelial cell | 2.12e-15 | 25 |
intestinal epithelial cell | 1.22e-14 | 9 |
epithelial cell of alimentary canal | 1.22e-14 | 9 |
defensive cell | 6.29e-11 | 7 |
endo-epithelial cell | 6.56e-09 | 15 |
endodermal cell | 9.65e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.51e-33 | 15 |
intestinal mucosa | 9.89e-22 | 13 |
wall of intestine | 9.89e-22 | 13 |
gastrointestinal system mucosa | 9.89e-22 | 13 |
organ component layer | 7.66e-21 | 24 |
gut-associated lymphoid tissue | 1.55e-17 | 2 |
mucosa-associated lymphoid tissue | 1.55e-17 | 2 |
lymphoid tissue | 1.55e-17 | 2 |
epithelium of mucosa | 1.22e-14 | 9 |
gastrointestinal system epithelium | 1.22e-14 | 9 |
intestinal epithelium | 1.22e-14 | 9 |
simple columnar epithelium | 4.84e-12 | 11 |
lymphoid system | 5.11e-12 | 3 |
egg chamber | 1.19e-09 | 1 |
intestine | 4.88e-09 | 31 |