Personal tools

FFCP PHASE1:Mm9::chr6:30754795..30754817,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr6:30754795..30754817,+
|DHSsupport=NA
|short_description=p2@uc009bfw.1
|DPIdataset=NA
|description=CAGE_peak_2_at_uc009bfw.1_5end
|association_with_transcript=11bp_to_uc009bfw.1_5end
|EntrezGene=
|EntrezGene=
|HGNC=
|HGNC=
|MCL_coexpression_id=145
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=11bp_to_uc009bfw.1_5end
|cluster_id=chr6:30754795..30754817,+
|description=CAGE_peak_2_at_uc009bfw.1_5end
|id=chr6:30754795..30754817,+
|ontology_enrichment_celltype=CL:0000117!1.06e-13!23;CL:0000337!1.06e-13!23;CL:0000540!9.56e-08!33;CL:0000047!9.56e-08!33;CL:0000031!9.56e-08!33;CL:0000404!9.56e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,1.92e-20,23;CL:0000337,1.92e-20,23;CL:0000540,2.35e-12,33;CL:0000047,2.35e-12,33;CL:0000031,2.35e-12,33;CL:0000404,2.35e-12,33;CL:0000393,1.50e-09,39;CL:0000211,1.50e-09,39;CL:0002319,3.87e-08,43;CL:0000221,7.89e-08,44;CL:0000133,7.89e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.21e-18!52;UBERON:0005068!1.21e-18!52;UBERON:0006241!1.21e-18!52;UBERON:0007135!1.21e-18!52;UBERON:0002020!5.58e-18!34;UBERON:0000955!3.55e-17!50;UBERON:0006238!3.55e-17!50;UBERON:0002616!1.14e-16!49;UBERON:0002346!5.12e-16!71;UBERON:0003075!5.12e-16!71;UBERON:0007284!5.12e-16!71;UBERON:0000033!8.04e-16!63;UBERON:0001017!1.10e-15!73;UBERON:0005743!1.10e-15!73;UBERON:0000073!1.20e-14!75;UBERON:0001016!1.20e-14!75;UBERON:0003056!2.02e-14!49;UBERON:0002791!2.45e-14!29;UBERON:0003528!2.45e-14!29;UBERON:0001893!2.45e-14!29;UBERON:0003080!6.54e-14!40;UBERON:0002780!2.76e-13!39;UBERON:0001890!2.76e-13!39;UBERON:0006240!2.76e-13!39;UBERON:0004121!5.35e-13!102;UBERON:0000924!5.35e-13!102;UBERON:0006601!5.35e-13!102;UBERON:0000025!1.61e-10!114;UBERON:0000956!4.03e-09!21;UBERON:0001869!4.03e-09!21;UBERON:0000203!4.03e-09!21;UBERON:0002021!5.26e-09!10;UBERON:0000411!5.26e-09!10;UBERON:0001950!5.26e-09!10;UBERON:0004111!1.50e-08!122;UBERON:0002619!1.55e-07!17;UBERON:0007811!1.90e-07!86;UBERON:0002420!9.69e-07!8;UBERON:0007245!9.69e-07!8;UBERON:0010009!9.69e-07!8;UBERON:0010011!9.69e-07!8;UBERON:0000454!9.69e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.18e-30,54;UBERON:0002020,2.33e-29,34;UBERON:0001049,4.36e-27,52;UBERON:0005068,4.36e-27,52;UBERON:0006241,4.36e-27,52;UBERON:0007135,4.36e-27,52;UBERON:0001017,6.53e-26,73;UBERON:0001016,7.21e-25,75;UBERON:0003528,6.57e-23,29;UBERON:0002791,6.57e-23,29;UBERON:0001893,6.57e-23,29;UBERON:0002346,3.91e-21,64;UBERON:0003075,3.91e-21,64;UBERON:0007284,3.91e-21,64;UBERON:0000955,7.02e-21,47;UBERON:0006238,7.02e-21,47;UBERON:0002616,4.69e-20,46;UBERON:0003080,2.70e-19,40;UBERON:0002780,3.02e-18,39;UBERON:0001890,3.02e-18,39;UBERON:0006240,3.02e-18,39;UBERON:0004121,6.89e-18,95;UBERON:0000924,6.89e-18,95;UBERON:0006601,6.89e-18,95;UBERON:0010371,3.94e-17,73;UBERON:0003056,2.23e-15,49;UBERON:0002021,7.31e-15,10;UBERON:0000411,7.31e-15,10;UBERON:0001950,7.31e-15,10;UBERON:0000956,9.69e-14,21;UBERON:0001869,9.69e-14,21;UBERON:0000203,9.69e-14,21;UBERON:0002619,2.99e-12,17;UBERON:0010314,3.91e-12,92;UBERON:0000025,1.90e-11,114;UBERON:0002420,7.89e-11,8;UBERON:0007245,7.89e-11,8;UBERON:0010009,7.89e-11,8;UBERON:0010011,7.89e-11,8;UBERON:0000454,7.89e-11,8;UBERON:0004111,6.40e-10,122;UBERON:0002240,4.44e-09,6;UBERON:0005174,4.44e-09,6;UBERON:0001137,4.44e-09,6;UBERON:0003076,2.60e-08,12;UBERON:0003057,2.60e-08,12;UBERON:0001948,8.31e-08,5;UBERON:0002315,8.31e-08,5;UBERON:0000369,4.68e-07,5;UBERON:0002435,4.68e-07,5;UBERON:0000204,4.68e-07,5;UBERON:0010082,4.68e-07,5
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,3.1739458756322,1.90149421051854,0,0,0,0,0,0,0,1.24427534770173,0.675029691658453,1.47227472945967,7.7125765789027,4.41737081903227,1.5923803897944,0.958454710182364,0,31.9336054898227,31.7941471832117,44.5458946443106,5.53922408466814,10.6125666578795,11.9810075228055,9.21303896704557,11.2552522006336,34.9907987408895,65.4075459751542,39.1522122197533,9.50637173709033,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0.301445281105245,0.705532242814229,0,0.247194967734374,0,0,0.161766849947409,0.662524555381181,0,0,0.878342391034642,1.04723353406728,0,0,0,0,7.04016005202667,3.20250421973039,5.15182843662744,2.78118912307642,5.11430914660661,5.40248915854856,4.38051410282946,0.101839363850316,0,0,0.841767423545896,0,0,0.360124259610698,0.452114453507145,0.748401490664606,1.40925092313335,0.562210347358373,0.776110112217047,0,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0.703578179943289,0,0,0.196764231747404,0.462801338662135,0.465067889500816,0,0.817357396570186,0.658239399653922,1.31333971263276,0.405344047729279,0.146199987425332,0,0,1.26173969138476,3.80747065803352,0,0,0,0.464473343720877,0,0,0,0,0,0,1.25667604400135,0.596869416123452,0.38992817423824,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.631222379012867,0.316182685621286,0.147610147979602,0,0,0.296452627087149,0,0,0,0,0,0,0,1.45921704097532,0.549122826376163,20.1275489138296,1.48856379067401,0.312037673114561,0,0.179397413521912,0.482443521363367,0,0,0,0.169745085775188,0.469380496577004,0.335012514883631,0.238043640886014,2.34160377429359,0.945810864637146,3.5434350343804,1.75400245523236,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,7.06422595946285,6.91548950893999,0,0.252470927204373,0,0,0.215423397732799,0,0,0.566153061577665,0,0,0,1.60660658210904,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0.614870295887855,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0.129358683782755,0,0.354680467284547,0,0.329098041204242,0.304464949114599,0.704015124191131,0,0,0,0.161464426695906,0.482503399425247,0.119372344003136,0.492422699235184,0,20.025932617135,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0.134864346384821,0.41326727862668,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0.201932899896295,0,0,0,0,0.116876902181569,0,0,0,0.335769232728157,0,0,0.183151624267265,0,0,42.35638819628,33.6037422650239,32.0821487526062,24.9187114398347,13.0165678756422,32.4819375877571,15.5255175053315,17.1122057225204,28.5479717660049,31.0656187051092,0,0.399024873401031,1.19513524027894,4.132814190161,0.209613162627982,0.735374033800057,0.666740183404846,0.618105171716683,0.962757628775446,2.02157769411038,0.25347929989024,0.943131706930381,1.21733959710847,1.21647789569252,0.976402972245426,0.952587382566147,1.27472758539341,0.578727661391115,0.824171801606613,0.883193520806384,2.05721551431249,3.54951612318675,0.715308569841963,0.581385666529314,1.03520318456864,1.09998990259179,2.19513567447327,2.10455769150274,1.62964936615034,0.561142271657738,1.18635018124174,2.56111654176465,0.818462086339379,0.464810523557898,1.35034627686799,3.49734809113124,1.16965804222704,1.71896843238639,0.191288332068843,1.32354851471709,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.67644320836673,3.1739458756322,1.90149421051854,0,0,0,0,0,0,0,1.24427534770173,0.675029691658453,1.47227472945967,7.7125765789027,4.41737081903227,1.5923803897944,0.958454710182364,0,31.9336054898227,31.7941471832117,44.5458946443106,5.53922408466814,10.6125666578795,11.9810075228055,9.21303896704557,11.2552522006336,34.9907987408895,65.4075459751542,39.1522122197533,9.50637173709033,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.230615497256059,0.301445281105245,0.705532242814229,0,0.247194967734374,0,0,0.161766849947409,0.662524555381181,0,0,0.878342391034642,1.04723353406728,0,0,0,0,7.04016005202667,3.20250421973039,5.15182843662744,2.78118912307642,5.11430914660661,5.40248915854856,4.38051410282946,0.101839363850316,0,0,0.841767423545896,0,0,0.360124259610698,0.452114453507145,0.748401490664606,1.40925092313335,0.562210347358373,0.776110112217047,0,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0.703578179943289,0,0,0.196764231747404,0.462801338662135,0.465067889500816,0,0.817357396570186,0.658239399653922,1.31333971263276,0.405344047729279,0.146199987425332,0,0,1.26173969138476,3.80747065803352,0,0,0,0.464473343720877,0,0,0,0,0,0,1.25667604400135,0.596869416123452,0.38992817423824,0,0,0,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.631222379012867,0.316182685621286,0.147610147979602,0,0,0.296452627087149,0,0,0,0,0,0,0,1.45921704097532,0.549122826376163,20.1275489138296,1.48856379067401,0.312037673114561,0,0.179397413521912,0.482443521363367,0,0,0,0.169745085775188,0.469380496577004,0.335012514883631,0.238043640886014,2.34160377429359,0.945810864637146,3.5434350343804,1.75400245523236,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,7.06422595946285,6.91548950893999,0,0.252470927204373,0,0,0.215423397732799,0,0,0.566153061577665,0,0,0,1.60660658210904,0,0.178065603667255,0.325773918707152,0,0,0,0,0,0,0.614870295887855,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0.129358683782755,0,0.354680467284547,0,0.329098041204242,0.304464949114599,0.704015124191131,0,0,0,0.161464426695906,0.482503399425247,0.119372344003136,0.492422699235184,0,20.025932617135,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0,0,0.134864346384821,0.41326727862668,0,0.129614973291793,0,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0.201932899896295,0,0,0,0,0.116876902181569,0,0,0,0.335769232728157,0,0,0.183151624267265,0,0,42.35638819628,33.6037422650239,32.0821487526062,24.9187114398347,13.0165678756422,32.4819375877571,15.5255175053315,17.1122057225204,28.5479717660049,31.0656187051092,0,0.399024873401031,1.19513524027894,4.132814190161,0.209613162627982,0.735374033800057,0.666740183404846,0.618105171716683,0.962757628775446,2.02157769411038,0.25347929989024,0.943131706930381,1.21733959710847,1.21647789569252,0.976402972245426,0.952587382566147,1.27472758539341,0.578727661391115,0.824171801606613,0.883193520806384,2.05721551431249,3.54951612318675,0.715308569841963,0.581385666529314,1.03520318456864,1.09998990259179,2.19513567447327,2.10455769150274,1.62964936615034,0.561142271657738,1.18635018124174,2.56111654176465,0.818462086339379,0.464810523557898,1.35034627686799,3.49734809113124,1.16965804222704,1.71896843238639,0.191288332068843,1.32354851471709,0
|short_description=p2@uc009bfw.1
}}
}}

Latest revision as of 13:47, 5 August 2015

Short description:p2@uc009bfw.1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_uc009bfw.1_5end
Coexpression cluster:MCL_coexpression_mm9:145
Association with transcript: 11bp_to_uc009bfw.1_5end
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@uc009bfw.1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D331.93
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F331.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D744.55
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.54
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.61
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.21
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.26
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I634.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D665.41
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F639.15
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.51
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.04
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F15.15
cortex, adult.CNhs10473.12-14D52.78
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F25.40
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G13.81
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.06
medulla oblongata, neonate N30.CNhs11200.1396-42A36.92
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C920.03
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A142.36
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A233.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A332.08
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D724.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A532.48
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A615.53
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A828.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A931.07
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.92e-2023
neuroblast (sensu Vertebrata)1.92e-2023
neuron2.35e-1233
neuronal stem cell2.35e-1233
neuroblast2.35e-1233
electrically signaling cell2.35e-1233
electrically responsive cell1.50e-0939
electrically active cell1.50e-0939
neural cell3.87e-0843
ectodermal cell7.89e-0844
neurectodermal cell7.89e-0844

Uber anatomy
Ontology termp-valuen
regional part of nervous system8.18e-3054
gray matter2.33e-2934
neural tube4.36e-2752
neural rod4.36e-2752
future spinal cord4.36e-2752
neural keel4.36e-2752
central nervous system6.53e-2673
nervous system7.21e-2575
brain grey matter6.57e-2329
regional part of telencephalon6.57e-2329
telencephalon6.57e-2329
neurectoderm3.91e-2164
neural plate3.91e-2164
presumptive neural plate3.91e-2164
brain7.02e-2147
future brain7.02e-2147
regional part of brain4.69e-2046
anterior neural tube2.70e-1940
regional part of forebrain3.02e-1839
forebrain3.02e-1839
future forebrain3.02e-1839
ectoderm-derived structure6.89e-1895
ectoderm6.89e-1895
presumptive ectoderm6.89e-1895
ecto-epithelium3.94e-1773
pre-chordal neural plate2.23e-1549
occipital lobe7.31e-1510
visual cortex7.31e-1510
neocortex7.31e-1510
cerebral cortex9.69e-1421
cerebral hemisphere9.69e-1421
pallium9.69e-1421
regional part of cerebral cortex2.99e-1217
structure with developmental contribution from neural crest3.91e-1292
tube1.90e-11114
basal ganglion7.89e-118
nuclear complex of neuraxis7.89e-118
aggregate regional part of brain7.89e-118
collection of basal ganglia7.89e-118
cerebral subcortex7.89e-118
anatomical conduit6.40e-10122
spinal cord4.44e-096
dorsal region element4.44e-096
dorsum4.44e-096
posterior neural tube2.60e-0812
chordal neural plate2.60e-0812
regional part of spinal cord8.31e-085
gray matter of spinal cord8.31e-085
corpus striatum4.68e-075
striatum4.68e-075
ventral part of telencephalon4.68e-075
future corpus striatum4.68e-075
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:30754795..30754817,%2B&oldid=3905815"