FFCP PHASE1:Mm9::chr13:105412781..105412798,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=467 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:105412781..105412798,+ | |||
|description=CAGE_peak_at_chr13:105412781..105412798,+ | |description=CAGE_peak_at_chr13:105412781..105412798,+ | ||
|id=chr13:105412781..105412798,+ | |id=chr13:105412781..105412798,+ | ||
|ontology_enrichment_celltype=CL:0000838!1.29e-33!12;CL:0000084!4.88e-31!11;CL:0000827!4.88e-31!11;CL:0000542!7.88e-31!13;CL:0000051!7.88e-31!13;CL:0000791!2.41e-26!9;CL:0000789!2.41e-26!9;CL:0002420!2.41e-26!9;CL:0002419!2.41e-26!9;CL:0000790!2.41e-26!9;CL:0000624!6.43e-24!8;CL:0000738!5.88e-23!17;CL:0002087!5.88e-23!17;CL:0002031!4.28e-20!25;CL:0000988!5.28e-20!32;CL:0002032!5.28e-20!32;CL:0000037!5.28e-20!32;CL:0000566!5.28e-20!32;CL:0000837!5.28e-20!32;CL:0000893!2.91e-18!6;CL:0002489!2.91e-18!6;CL:0000898!2.91e-18!6;CL:0000809!2.91e-18!6;CL:0000810!2.91e-18!6;CL:0000895!2.91e-18!6;CL:0000808!2.91e-18!6;CL:0000894!2.91e-18!6;CL:0000806!2.91e-18!6;CL:0000807!2.91e-18!6;CL:0000805!2.91e-18!6;CL:0002425!2.91e-18!6;CL:0002436!2.91e-18!6;CL:0002427!2.91e-18!6;CL:0002428!2.91e-18!6;CL:0002429!2.91e-18!6;CL:0002433!2.91e-18!6;CL:0002431!2.91e-18!6;CL:0002432!2.91e-18!6;CL:0002320!8.25e-13!46;CL:0000134!8.25e-13!46;CL:0000219!2.21e-10!54;CL:0000063!7.42e-08!66 | |ontology_enrichment_celltype=CL:0000838!1.29e-33!12;CL:0000084!4.88e-31!11;CL:0000827!4.88e-31!11;CL:0000542!7.88e-31!13;CL:0000051!7.88e-31!13;CL:0000791!2.41e-26!9;CL:0000789!2.41e-26!9;CL:0002420!2.41e-26!9;CL:0002419!2.41e-26!9;CL:0000790!2.41e-26!9;CL:0000624!6.43e-24!8;CL:0000738!5.88e-23!17;CL:0002087!5.88e-23!17;CL:0002031!4.28e-20!25;CL:0000988!5.28e-20!32;CL:0002032!5.28e-20!32;CL:0000037!5.28e-20!32;CL:0000566!5.28e-20!32;CL:0000837!5.28e-20!32;CL:0000893!2.91e-18!6;CL:0002489!2.91e-18!6;CL:0000898!2.91e-18!6;CL:0000809!2.91e-18!6;CL:0000810!2.91e-18!6;CL:0000895!2.91e-18!6;CL:0000808!2.91e-18!6;CL:0000894!2.91e-18!6;CL:0000806!2.91e-18!6;CL:0000807!2.91e-18!6;CL:0000805!2.91e-18!6;CL:0002425!2.91e-18!6;CL:0002436!2.91e-18!6;CL:0002427!2.91e-18!6;CL:0002428!2.91e-18!6;CL:0002429!2.91e-18!6;CL:0002433!2.91e-18!6;CL:0002431!2.91e-18!6;CL:0002432!2.91e-18!6;CL:0002320!8.25e-13!46;CL:0000134!8.25e-13!46;CL:0000219!2.21e-10!54;CL:0000063!7.42e-08!66 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.32e-86,8;CL:0000791,4.97e-77,9;CL:0000789,4.97e-77,9;CL:0002420,4.97e-77,9;CL:0002419,4.97e-77,9;CL:0000790,4.97e-77,9;CL:0000893,6.21e-65,6;CL:0002489,6.21e-65,6;CL:0000898,6.21e-65,6;CL:0000809,6.21e-65,6;CL:0000810,6.21e-65,6;CL:0000895,6.21e-65,6;CL:0000808,6.21e-65,6;CL:0000894,6.21e-65,6;CL:0000806,6.21e-65,6;CL:0000807,6.21e-65,6;CL:0000805,6.21e-65,6;CL:0002425,6.21e-65,6;CL:0002436,6.21e-65,6;CL:0002427,6.21e-65,6;CL:0002428,6.21e-65,6;CL:0002429,6.21e-65,6;CL:0002433,6.21e-65,6;CL:0002431,6.21e-65,6;CL:0002432,6.21e-65,6;CL:0000084,4.29e-63,11;CL:0000827,4.29e-63,11;CL:0000838,7.26e-58,12;CL:0000542,1.94e-53,13;CL:0000051,1.94e-53,13;CL:0000738,6.20e-41,17;CL:0002087,6.20e-41,17;CL:0002031,6.66e-28,25;CL:0000988,7.89e-22,32;CL:0002032,7.89e-22,32;CL:0000037,7.89e-22,32;CL:0000837,7.89e-22,32;CL:0002320,3.33e-15,46;CL:0000134,3.33e-15,46;CL:0000219,5.97e-13,54;CL:0000815,1.20e-12,1;CL:0000792,1.20e-12,1;CL:0000723,1.22e-07,91;CL:0000048,1.22e-07,91;CL:0000034,3.71e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.94e-21!23;UBERON:0000974!2.94e-21!23;UBERON:0004807!2.94e-21!23;UBERON:0005058!2.94e-21!23;UBERON:0003351!2.94e-21!23;UBERON:0009113!2.94e-21!23;UBERON:0003295!2.94e-21!23;UBERON:0009722!2.94e-21!23;UBERON:0005562!2.94e-21!23;UBERON:0007690!2.94e-21!23;UBERON:0006562!3.03e-20!24;UBERON:0003408!3.03e-20!24;UBERON:0001557!3.03e-20!24;UBERON:0001042!3.03e-20!24;UBERON:0008814!3.03e-20!24;UBERON:0009145!3.03e-20!24;UBERON:0004177!1.19e-18!29;UBERON:0000072!1.18e-17!27;UBERON:0002193!5.03e-15!48;UBERON:0002390!2.93e-14!45;UBERON:0003061!2.93e-14!45;UBERON:0000065!5.18e-14!41;UBERON:0001004!1.36e-13!42;UBERON:0000063!6.42e-13!35;UBERON:0002384!8.25e-13!46;UBERON:0005057!3.39e-09!51;UBERON:0002405!4.63e-09!70;UBERON:0003081!2.67e-07!88;UBERON:0003929!3.83e-07!55;UBERON:0005911!6.20e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.69e-17,23;UBERON:0000974,3.69e-17,23;UBERON:0004807,3.69e-17,23;UBERON:0005058,3.69e-17,23;UBERON:0003351,3.69e-17,23;UBERON:0009113,3.69e-17,23;UBERON:0003295,3.69e-17,23;UBERON:0009722,3.69e-17,23;UBERON:0005562,3.69e-17,23;UBERON:0007690,3.69e-17,23;UBERON:0006562,1.88e-16,24;UBERON:0003408,1.88e-16,24;UBERON:0001557,1.88e-16,24;UBERON:0001042,1.88e-16,24;UBERON:0008814,1.88e-16,24;UBERON:0009145,1.88e-16,24;UBERON:0002384,3.33e-15,46;UBERON:0000072,1.22e-14,27;UBERON:0004177,1.22e-13,29;UBERON:0005057,1.22e-13,29;UBERON:0000077,2.56e-11,35;UBERON:0007811,5.26e-11,36;UBERON:0000065,1.14e-09,41;UBERON:0001004,1.93e-09,42;UBERON:0000153,3.20e-09,43;UBERON:0002390,8.21e-09,45;UBERON:0003061,8.21e-09,45;UBERON:0002193,2.92e-08,48;UBERON:0002405,2.92e-08,48;UBERON:0003929,3.31e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,35.2506672995503,17.0354353803517,14.0438715793196,26.0251311702768,8.93448180747768,3.0816131387617,1.39872643870396,0,0,0,0.157731082679119,0,0.42438965179803,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,3.62681071005672,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.339956859987711,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.596044064343795,0,0.147689527174577,0,0.228620419965,0.201652370273681,0.0974578807397524,0.192423683280659,0.584384510907845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,35.2506672995503,17.0354353803517,14.0438715793196,26.0251311702768,8.93448180747768,3.0816131387617,1.39872643870396,0,0,0,0.157731082679119,0,0.42438965179803,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,3.62681071005672,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.339956859987711,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.596044064343795,0,0.147689527174577,0,0.228620419965,0.201652370273681,0.0974578807397524,0.192423683280659,0.584384510907845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:105412781..105412798,+ | |short_description=p@chr13:105412781..105412798,+ | ||
}} | }} |
Latest revision as of 13:42, 5 August 2015
Short description: | p@chr13:105412781..105412798, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:105412781..105412798, + |
Coexpression cluster: | MCL_coexpression_mm9:467 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.69e-17 | 23 |
neck | 3.69e-17 | 23 |
respiratory system epithelium | 3.69e-17 | 23 |
hemolymphoid system gland | 3.69e-17 | 23 |
pharyngeal epithelium | 3.69e-17 | 23 |
thymic region | 3.69e-17 | 23 |
pharyngeal gland | 3.69e-17 | 23 |
entire pharyngeal arch endoderm | 3.69e-17 | 23 |
thymus primordium | 3.69e-17 | 23 |
early pharyngeal endoderm | 3.69e-17 | 23 |
pharynx | 1.88e-16 | 24 |
gland of gut | 1.88e-16 | 24 |
upper respiratory tract | 1.88e-16 | 24 |
chordate pharynx | 1.88e-16 | 24 |
pharyngeal arch system | 1.88e-16 | 24 |
pharyngeal region of foregut | 1.88e-16 | 24 |
connective tissue | 3.33e-15 | 46 |
segment of respiratory tract | 1.22e-14 | 27 |
hemopoietic organ | 1.22e-13 | 29 |
immune organ | 1.22e-13 | 29 |
mixed endoderm/mesoderm-derived structure | 2.56e-11 | 35 |
craniocervical region | 5.26e-11 | 36 |
respiratory tract | 1.14e-09 | 41 |
respiratory system | 1.93e-09 | 42 |
anterior region of body | 3.20e-09 | 43 |
hematopoietic system | 8.21e-09 | 45 |
blood island | 8.21e-09 | 45 |
hemolymphoid system | 2.92e-08 | 48 |
immune system | 2.92e-08 | 48 |
gut epithelium | 3.31e-07 | 55 |