FFCP PHASE1:Mm9::chr15:76446888..76446909,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:76446888..76446909,- | |||
|description=CAGE_peak_at_chr15:76446888..76446909,- | |description=CAGE_peak_at_chr15:76446888..76446909,- | ||
|id=chr15:76446888..76446909,- | |id=chr15:76446888..76446909,- | ||
|ontology_enrichment_celltype=CL:0002563!2.11e-07!9;CL:0002251!2.11e-07!9;CL:0000066!2.85e-07!25 | |ontology_enrichment_celltype=CL:0002563!2.11e-07!9;CL:0002251!2.11e-07!9;CL:0000066!2.85e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.71e-12,25;CL:0002076,1.18e-10,15;CL:0002563,1.22e-10,9;CL:0002251,1.22e-10,9;CL:0000223,1.46e-10,20;CL:0000239,5.15e-10,6;CL:0000677,5.15e-10,6;CL:0000584,5.15e-10,6;CL:0000075,1.86e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!6.22e-21!128;UBERON:0001555!6.22e-21!128;UBERON:0007026!6.22e-21!128;UBERON:0004119!7.06e-21!130;UBERON:0000925!7.06e-21!130;UBERON:0006595!7.06e-21!130;UBERON:0004921!1.65e-19!126;UBERON:0004185!1.65e-19!126;UBERON:0000160!1.43e-16!43;UBERON:0005409!7.38e-15!59;UBERON:0000344!1.47e-12!15;UBERON:0001242!5.36e-11!13;UBERON:0000060!5.36e-11!13;UBERON:0001262!5.36e-11!13;UBERON:0004786!5.36e-11!13;UBERON:0009854!1.50e-10!23;UBERON:0009856!1.50e-10!23;UBERON:0002107!1.04e-09!22;UBERON:0007499!1.04e-09!22;UBERON:0006925!1.04e-09!22;UBERON:0009497!1.04e-09!22;UBERON:0000015!1.04e-09!22;UBERON:0002423!1.04e-09!22;UBERON:0006235!1.04e-09!22;UBERON:0008835!1.04e-09!22;UBERON:0003894!1.04e-09!22;UBERON:0004161!1.04e-09!22;UBERON:0008836!1.04e-09!22;UBERON:0003929!5.62e-09!55;UBERON:0005911!5.90e-08!69;UBERON:0002365!1.02e-07!25;UBERON:0002330!1.02e-07!25;UBERON:0003350!2.11e-07!9;UBERON:0004808!2.11e-07!9;UBERON:0001277!2.11e-07!9;UBERON:0004923!4.28e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.91e-40,31;UBERON:0005409,1.22e-27,47;UBERON:0001007,2.24e-21,116;UBERON:0001555,2.24e-21,116;UBERON:0007026,2.24e-21,116;UBERON:0004119,8.10e-21,118;UBERON:0000925,8.10e-21,118;UBERON:0006595,8.10e-21,118;UBERON:0000344,1.83e-20,15;UBERON:0004921,2.75e-19,114;UBERON:0001242,1.90e-17,13;UBERON:0001262,1.90e-17,13;UBERON:0004786,1.90e-17,13;UBERON:0004923,2.25e-11,24;UBERON:0003350,1.22e-10,9;UBERON:0004808,1.22e-10,9;UBERON:0001277,1.22e-10,9;UBERON:0002108,1.59e-08,4;UBERON:0000485,1.99e-08,11;UBERON:0009854,1.73e-07,23;UBERON:0009856,1.73e-07,23;UBERON:0011216,8.15e-07,194;UBERON:0000331,8.27e-07,3;UBERON:0002116,8.27e-07,3;UBERON:0001204,8.27e-07,3;UBERON:0001168,8.27e-07,3 | |||
|phase1_expression=0,4.88565570695105,2.72999543633722,3.93203474698879,3.50627010962443,2.01455126294268,1.86890112476421,0.129123323441576,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0.274228867211478,0,0.0850432901510698,0.297872853602656,0,3.67982572424835,3.44113921600755,2.29692785646008,1.29228598847722,3.01659725760245,8.36103045608045,5.29263272495855,6.20845429834853,0,0,0,0.577703239502549,1.16364251750945,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0.539703191637817,2.59910566979068,1.34408066129201,0.842666520790511,0,0,0,0,0,0,0,1.73192832808971,1.01343946190039,1.51657333504435,1.02765491747154,0.258937883647172,0,0,0,0.230615497256059,0.150722640552623,0,0,0.247194967734374,0,0,0.161766849947409,0,0,7.45567044872489,0,0,4.08731288333746,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60837565967596,4.7601101999438,0,0,1.15980715189884,2.21851877085677,2.89091456998331,6.27744566171445,4.2707615539006,6.42325923423642,5.02670417600539,5.57078121715222,5.45899443933536,4.49409704327111,3.6743468478698,3.98282546508734,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0.166845105716094,0.393117990226406,1.12431056192427,0.405720242777006,0.72353147925725,1.78238096246994,1.15078454980324,2.7562988551756,3.0201755450689,1.43768206527355,2.23284568601102,2.49630138491648,0.505157755894224,0.179397413521912,2.41221760681684,0,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,1.81467135269789,0,0,0.906970670894253,0.188605079755898,0,0,2.58428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,0.339956859987711,0.69975726161829,0.276399947608848,0,0,0.406638934253697,0.108005340821801,0.209088296014469,1.31017538247707,0.269728692769641,0.578574190077352,0.523511883968059,2.07383957266869,0,0,0,0,0.194451188344048,0,0.337912250981556,0,0,0,0,0,0,0.202725215290164,0.308132871494482,0,0,0,0,0,0.201932899896295,0.533447646584999,0.302478555410522,0.0974578807397524,0.0962118416403295,0,0,0,0,0.167884616364078,0,0.187682475451182,1.83151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.412070114477788,0.320919209591815,1.01078884705519,0.25347929989024,0.188626341386076,0.749132059759059,0.256100609619477,0.34461281373368,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0,0.238436189947321,1.16277133305863,0,0.338458431566706,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0.474540072496697,0.29551344712669,0,0.464810523557898,0.771626443924566,0,0.467863216890817,1.07435527024149,0,0,0 | |phase1_expression=0,4.88565570695105,2.72999543633722,3.93203474698879,3.50627010962443,2.01455126294268,1.86890112476421,0.129123323441576,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0,0.274228867211478,0,0.0850432901510698,0.297872853602656,0,3.67982572424835,3.44113921600755,2.29692785646008,1.29228598847722,3.01659725760245,8.36103045608045,5.29263272495855,6.20845429834853,0,0,0,0.577703239502549,1.16364251750945,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0.539703191637817,2.59910566979068,1.34408066129201,0.842666520790511,0,0,0,0,0,0,0,1.73192832808971,1.01343946190039,1.51657333504435,1.02765491747154,0.258937883647172,0,0,0,0.230615497256059,0.150722640552623,0,0,0.247194967734374,0,0,0.161766849947409,0,0,7.45567044872489,0,0,4.08731288333746,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.60837565967596,4.7601101999438,0,0,1.15980715189884,2.21851877085677,2.89091456998331,6.27744566171445,4.2707615539006,6.42325923423642,5.02670417600539,5.57078121715222,5.45899443933536,4.49409704327111,3.6743468478698,3.98282546508734,0,0,0,0,0,0,0,0,0,0,0.889357881261447,0.166845105716094,0.393117990226406,1.12431056192427,0.405720242777006,0.72353147925725,1.78238096246994,1.15078454980324,2.7562988551756,3.0201755450689,1.43768206527355,2.23284568601102,2.49630138491648,0.505157755894224,0.179397413521912,2.41221760681684,0,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,1.81467135269789,0,0,0.906970670894253,0.188605079755898,0,0,2.58428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,0.339956859987711,0.69975726161829,0.276399947608848,0,0,0.406638934253697,0.108005340821801,0.209088296014469,1.31017538247707,0.269728692769641,0.578574190077352,0.523511883968059,2.07383957266869,0,0,0,0,0.194451188344048,0,0.337912250981556,0,0,0,0,0,0,0.202725215290164,0.308132871494482,0,0,0,0,0,0.201932899896295,0.533447646584999,0.302478555410522,0.0974578807397524,0.0962118416403295,0,0,0,0,0.167884616364078,0,0.187682475451182,1.83151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0.412070114477788,0.320919209591815,1.01078884705519,0.25347929989024,0.188626341386076,0.749132059759059,0.256100609619477,0.34461281373368,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0,0.238436189947321,1.16277133305863,0,0.338458431566706,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0.474540072496697,0.29551344712669,0,0.464810523557898,0.771626443924566,0,0.467863216890817,1.07435527024149,0,0,0 | ||
|short_description=p@chr15:76446888..76446909,- | |short_description=p@chr15:76446888..76446909,- | ||
}} | }} |
Latest revision as of 13:02, 5 August 2015
Short description: | p@chr15:76446888..76446909, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:76446888..76446909, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.71e-12 | 25 |
endo-epithelial cell | 1.18e-10 | 15 |
intestinal epithelial cell | 1.22e-10 | 9 |
epithelial cell of alimentary canal | 1.22e-10 | 9 |
endodermal cell | 1.46e-10 | 20 |
brush border epithelial cell | 5.15e-10 | 6 |
gut absorptive cell | 5.15e-10 | 6 |
enterocyte | 5.15e-10 | 6 |
columnar/cuboidal epithelial cell | 1.86e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.91e-40 | 31 |
gastrointestinal system | 1.22e-27 | 47 |
digestive system | 2.24e-21 | 116 |
digestive tract | 2.24e-21 | 116 |
primitive gut | 2.24e-21 | 116 |
endoderm-derived structure | 8.10e-21 | 118 |
endoderm | 8.10e-21 | 118 |
presumptive endoderm | 8.10e-21 | 118 |
mucosa | 1.83e-20 | 15 |
subdivision of digestive tract | 2.75e-19 | 114 |
intestinal mucosa | 1.90e-17 | 13 |
wall of intestine | 1.90e-17 | 13 |
gastrointestinal system mucosa | 1.90e-17 | 13 |
organ component layer | 2.25e-11 | 24 |
epithelium of mucosa | 1.22e-10 | 9 |
gastrointestinal system epithelium | 1.22e-10 | 9 |
intestinal epithelium | 1.22e-10 | 9 |
small intestine | 1.59e-08 | 4 |
simple columnar epithelium | 1.99e-08 | 11 |
digestive tract diverticulum | 1.73e-07 | 23 |
sac | 1.73e-07 | 23 |
organ system subdivision | 8.15e-07 | 194 |
ileal mucosa | 8.27e-07 | 3 |
ileum | 8.27e-07 | 3 |
mucosa of small intestine | 8.27e-07 | 3 |
wall of small intestine | 8.27e-07 | 3 |