FFCP PHASE1:Mm9::chr18:12414729..12414751,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:12414729..12414751,+
|short_description=p@chr18:12414729..12414751,+
|description=CAGE_peak_at_chr18:12414729..12414751,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3127 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:12414729..12414751,+ | |||
|description=CAGE_peak_at_chr18:12414729..12414751,+ | |||
|id=chr18:12414729..12414751,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.26e-08!9;CL:0002251!4.26e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.65e-14,9;CL:0002251,5.65e-14,9;CL:0000239,2.53e-09,6;CL:0000677,2.53e-09,6;CL:0000584,2.53e-09,6;CL:0000066,3.53e-08,25;CL:0000075,7.70e-08,7;CL:0002076,1.81e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.96e-19!59;UBERON:0000160!5.53e-19!43;UBERON:0001007!1.36e-14!128;UBERON:0001555!1.36e-14!128;UBERON:0007026!1.36e-14!128;UBERON:0004119!6.70e-14!130;UBERON:0000925!6.70e-14!130;UBERON:0006595!6.70e-14!130;UBERON:0004921!2.27e-13!126;UBERON:0004185!2.27e-13!126;UBERON:0000344!8.82e-12!15;UBERON:0001242!3.83e-10!13;UBERON:0000060!3.83e-10!13;UBERON:0001262!3.83e-10!13;UBERON:0004786!3.83e-10!13;UBERON:0004923!1.91e-08!24;UBERON:0003350!4.26e-08!9;UBERON:0004808!4.26e-08!9;UBERON:0001277!4.26e-08!9;UBERON:0000485!8.16e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.11e-27,31;UBERON:0000344,5.73e-21,15;UBERON:0005409,1.56e-19,47;UBERON:0001242,7.44e-18,13;UBERON:0001262,7.44e-18,13;UBERON:0004786,7.44e-18,13;UBERON:0004923,6.48e-15,24;UBERON:0003350,5.65e-14,9;UBERON:0004808,5.65e-14,9;UBERON:0001277,5.65e-14,9;UBERON:0000485,5.27e-11,11;UBERON:0007100,6.87e-10,18;UBERON:0000948,6.87e-10,18;UBERON:0005498,6.87e-10,18;UBERON:0004140,6.87e-10,18;UBERON:0009881,6.87e-10,18;UBERON:0004141,6.87e-10,18;UBERON:0003084,6.87e-10,18;UBERON:0007005,6.87e-10,18;UBERON:0004139,6.87e-10,18;UBERON:0004291,6.87e-10,18;UBERON:0001007,6.51e-08,116;UBERON:0001555,6.51e-08,116;UBERON:0007026,6.51e-08,116;UBERON:0004119,1.28e-07,118;UBERON:0000925,1.28e-07,118;UBERON:0006595,1.28e-07,118;UBERON:0004535,4.47e-07,23;UBERON:0001009,4.47e-07,23 | |||
|phase1_expression=0,3.48975407639361,5.0049916332849,4.23449895829562,5.50985302940982,3.02182689441402,4.43864017131499,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,10.0795226359846,7.79991555628378,2.8711598205751,4.30761996159075,5.17130958446134,2.09025761402011,2.52030129759931,1.77384408524244,0,0,0,16.1756907060714,7.64679368649065,12.4543307320045,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75979933595425,0,0.649776417447669,0.896053774194671,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0.742210695324124,0.867426633830679,1.52232739156071,1.38369298353635,1.65794904607885,1.52865319276416,0.125666591329675,5.19109432242185,0,0,0,0.220841518460394,0,3.72783522436244,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,1.44988040774851,2.11073453982987,1.98068267607116,1.42046841351126,1.18058539048442,1.54267112887378,2.55787339225449,2.41446061259657,3.50296027101508,3.45575684818309,6.40253109908471,3.08061476274252,1.60819986167866,0.658650345873152,0.805238512562231,0,0,1.65209391491899,1.05780226665418,0,0.232236671860439,0.644337306610467,0.80673409849337,0.667134131534611,1.14135375667535,3.79623249235609,2.79988223030818,3.2673577144035,3.38226002469956,2.33956904542944,2.69645822596266,6.48414149624083,5.97423819763102,0.189667900953082,0.114248512609729,0,0,0,0.210407459670956,0.0632365371242573,0,0,0,0,0.83422552858047,0.393117990226406,1.12431056192427,0,0.964708639009667,1.2731292589071,2.87696137450811,2.10775794807546,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.717589654087649,0,0.554259570499814,1.32643988239339,0,0.678980343100753,0.234690248288502,0.167506257441816,0.238043640886014,0.975668239288994,0.315270288212382,0.221464689648775,0.797273843287435,0.655453258862952,0.345369963731791,0.578596234326046,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0.494910368917606,0,0.242780636154981,0.302323556964751,1.32023555829129,1.77181135728464,0.307435147943927,1.80899805217755,2.90826983582004,9.26893183800275,4.10847785316561,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9465875882444,0.484393280087717,0.663442174209714,0.596861720015682,0.492422699235184,7.86998258900597,0,0.341741761595705,0,0,0.565105371014073,1.23024804948923,0,0,0,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0.627264888043406,1.09181281873089,0.944050424693745,0.826534557253359,0.26175594198403,9.0730481304255,0,0,0.747582730219894,0.496375471371293,0.972255941720238,0.516639293910924,0.337912250981556,1.05621514781179,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0,0.129920822977795,0.179026695667481,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0.233753804363138,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.419226325255965,0.735374033800057,0,0.412070114477788,0,0.252697211763798,0.50695859978048,0,0.936415074698824,0.960377286073039,0.34461281373368,0,0.347652977834566,0,0,0.735994600671987,0.685738504770831,0.354951612318675,0.238436189947321,0.145346416632329,0.376437521661322,0.338458431566706,0,0.789209134313529,0.407412341537585,0,0.711810108745045,0.492522411877817,0,0.464810523557898,0.192906610981141,0,0,0.644613162144895,0,0.661774257358546,0 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|phase1_expression=0,3.48975407639361,5.0049916332849,4.23449895829562,5.50985302940982,3.02182689441402,4.43864017131499,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,10.0795226359846,7.79991555628378,2.8711598205751,4.30761996159075,5.17130958446134,2.09025761402011,2.52030129759931,1.77384408524244,0,0,0,16.1756907060714,7.64679368649065,12.4543307320045,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75979933595425,0,0.649776417447669,0.896053774194671,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0.742210695324124,0.867426633830679,1.52232739156071,1.38369298353635,1.65794904607885,1.52865319276416,0.125666591329675,5.19109432242185,0,0,0,0.220841518460394,0,3.72783522436244,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,1.44988040774851,2.11073453982987,1.98068267607116,1.42046841351126,1.18058539048442,1.54267112887378,2.55787339225449,2.41446061259657,3.50296027101508,3.45575684818309,6.40253109908471,3.08061476274252,1.60819986167866,0.658650345873152,0.805238512562231,0,0,1.65209391491899,1.05780226665418,0,0.232236671860439,0.644337306610467,0.80673409849337,0.667134131534611,1.14135375667535,3.79623249235609,2.79988223030818,3.2673577144035,3.38226002469956,2.33956904542944,2.69645822596266,6.48414149624083,5.97423819763102,0.189667900953082,0.114248512609729,0,0,0,0.210407459670956,0.0632365371242573,0,0,0,0,0.83422552858047,0.393117990226406,1.12431056192427,0,0.964708639009667,1.2731292589071,2.87696137450811,2.10775794807546,0,0,0.372140947668503,0.312037673114561,0.252578877947112,0.717589654087649,0,0.554259570499814,1.32643988239339,0,0.678980343100753,0.234690248288502,0.167506257441816,0.238043640886014,0.975668239288994,0.315270288212382,0.221464689648775,0.797273843287435,0.655453258862952,0.345369963731791,0.578596234326046,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0.494910368917606,0,0.242780636154981,0.302323556964751,1.32023555829129,1.77181135728464,0.307435147943927,1.80899805217755,2.90826983582004,9.26893183800275,4.10847785316561,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9465875882444,0.484393280087717,0.663442174209714,0.596861720015682,0.492422699235184,7.86998258900597,0,0.341741761595705,0,0,0.565105371014073,1.23024804948923,0,0,0,0,0,0.158167996790568,0.406638934253697,0.216010681643603,0.627264888043406,1.09181281873089,0.944050424693745,0.826534557253359,0.26175594198403,9.0730481304255,0,0,0.747582730219894,0.496375471371293,0.972255941720238,0.516639293910924,0.337912250981556,1.05621514781179,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0,0.129920822977795,0.179026695667481,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0.233753804363138,0,0,0,0,0.579568782096571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0.243106717068294,0.419226325255965,0.735374033800057,0,0.412070114477788,0,0.252697211763798,0.50695859978048,0,0.936415074698824,0.960377286073039,0.34461281373368,0,0.347652977834566,0,0,0.735994600671987,0.685738504770831,0.354951612318675,0.238436189947321,0.145346416632329,0.376437521661322,0.338458431566706,0,0.789209134313529,0.407412341537585,0,0.711810108745045,0.492522411877817,0,0.464810523557898,0.192906610981141,0,0,0.644613162144895,0,0.661774257358546,0 | ||
|short_description=p@chr18:12414729..12414751,+ | |||
}} | }} |
Latest revision as of 12:58, 5 August 2015
Short description: | p@chr18:12414729..12414751, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:12414729..12414751, + |
Coexpression cluster: | MCL_coexpression_mm9:3127 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.65e-14 | 9 |
epithelial cell of alimentary canal | 5.65e-14 | 9 |
brush border epithelial cell | 2.53e-09 | 6 |
gut absorptive cell | 2.53e-09 | 6 |
enterocyte | 2.53e-09 | 6 |
epithelial cell | 3.53e-08 | 25 |
columnar/cuboidal epithelial cell | 7.70e-08 | 7 |
endo-epithelial cell | 1.81e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.11e-27 | 31 |
mucosa | 5.73e-21 | 15 |
gastrointestinal system | 1.56e-19 | 47 |
intestinal mucosa | 7.44e-18 | 13 |
wall of intestine | 7.44e-18 | 13 |
gastrointestinal system mucosa | 7.44e-18 | 13 |
organ component layer | 6.48e-15 | 24 |
epithelium of mucosa | 5.65e-14 | 9 |
gastrointestinal system epithelium | 5.65e-14 | 9 |
intestinal epithelium | 5.65e-14 | 9 |
simple columnar epithelium | 5.27e-11 | 11 |
primary circulatory organ | 6.87e-10 | 18 |
heart | 6.87e-10 | 18 |
primitive heart tube | 6.87e-10 | 18 |
primary heart field | 6.87e-10 | 18 |
anterior lateral plate mesoderm | 6.87e-10 | 18 |
heart tube | 6.87e-10 | 18 |
heart primordium | 6.87e-10 | 18 |
cardiac mesoderm | 6.87e-10 | 18 |
cardiogenic plate | 6.87e-10 | 18 |
heart rudiment | 6.87e-10 | 18 |
digestive system | 6.51e-08 | 116 |
digestive tract | 6.51e-08 | 116 |
primitive gut | 6.51e-08 | 116 |
endoderm-derived structure | 1.28e-07 | 118 |
endoderm | 1.28e-07 | 118 |
presumptive endoderm | 1.28e-07 | 118 |
cardiovascular system | 4.47e-07 | 23 |
circulatory system | 4.47e-07 | 23 |