FFCP PHASE1:Mm9::chr13:101346246..101346253,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:101346246..101346253,+|id=chr13:101346246..101346253,+|ontology_enrichment_celltype=CL:0002563!8.37e-25!9;CL:0002251!8.37e-25!9;CL:0000239!1.26e-17!6;CL:0000677!1.26e-17!6;CL:0000212!1.26e-17!6;CL:0000584!1.26e-17!6;CL:0000063!3.96e-17!66;CL:0000066!6.02e-17!25;CL:0000075!5.31e-15!7;CL:0002076!3.46e-14!15;CL:0000223!1.00e-12!20;CL:0000144!6.39e-11!121;CL:0000012!6.39e-11!121;CL:0000473!3.05e-09!3;CL:0000627!3.05e-09!3;CL:0000682!3.05e-09!3;CL:0002250!9.30e-09!3;CL:0000548!1.41e-08!115;CL:0000004!1.41e-08!115;CL:0000255!1.41e-08!115;CL:0002371!3.16e-08!118;CL:0000049!1.54e-07!19|ontology_enrichment_celltype_v019_2=CL:0002563,1.06e-39,9;CL:0002251,1.06e-39,9;CL:0000239,3.18e-31,6;CL:0000677,3.18e-31,6;CL:0000584,3.18e-31,6;CL:0000066,1.71e-28,25;CL:0000075,8.62e-27,7;CL:0002076,1.00e-23,15;CL:0000223,4.63e-23,20;CL:0002250,1.77e-10,3;CL:0000682,1.77e-10,3;CL:0000213,1.05e-08,1;CL:0002078,1.05e-08,1;CL:0000115,1.05e-08,1;CL:0002262,1.05e-08,1;CL:1000398,1.05e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!8.37e-25!9;UBERON:0004808!8.37e-25!9;UBERON:0001277!8.37e-25!9;UBERON:0001242!3.28e-20!13;UBERON:0000060!3.28e-20!13;UBERON:0001262!3.28e-20!13;UBERON:0004786!3.28e-20!13;UBERON:0000485!5.59e-20!11;UBERON:0000344!3.03e-17!15;UBERON:0004923!5.04e-10!24;UBERON:0000160!4.18e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.06e-39,9;UBERON:0004808,1.06e-39,9;UBERON:0001277,1.06e-39,9;UBERON:0000485,1.91e-32,11;UBERON:0001242,2.04e-27,13;UBERON:0001262,2.04e-27,13;UBERON:0004786,2.04e-27,13;UBERON:0000344,1.00e-23,15;UBERON:0004923,1.06e-14,24;UBERON:0000160,2.75e-11,31;UBERON:0002394,1.05e-08,1;UBERON:0001281,1.05e-08,1;UBERON:0000353,1.05e-08,1;UBERON:0003497,1.05e-08,1;UBERON:0003909,1.05e-08,1;UBERON:0003928,1.05e-08,1;UBERON:0003835,1.05e-08,1;UBERON:0003513,1.05e-08,1;UBERON:0001280,1.05e-08,1;UBERON:0004647,1.05e-08,1;UBERON:0002294,1.05e-08,1;UBERON:0001173,1.05e-08,1;UBERON:0004912,1.05e-08,1;UBERON:0005171,1.05e-08,1;UBERON:0003929,5.28e-08,55;UBERON:0005409,2.80e-07,47|phase1_expression=0,4.88565570695105,2.27499619694768,17.845388467103,22.0394121176393,0.839396359559449,1.63528848416868,0,0,0,0,0,0.171200729931206,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0,0.198581902401771,0,0,0,1.72269589234506,1.7230479846363,0.861884930743556,0.190023419456374,0,0,0,0,0,2.02196133825892,0.166234645358492,1.63335485009895,0,0,0,2.94115744015507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,1.79970819298022,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.69975726161829,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:101346246..101346253,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:101346246..101346253,+ | |||
|description=CAGE_peak_at_chr13:101346246..101346253,+ | |||
|id=chr13:101346246..101346253,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.37e-25!9;CL:0002251!8.37e-25!9;CL:0000239!1.26e-17!6;CL:0000677!1.26e-17!6;CL:0000212!1.26e-17!6;CL:0000584!1.26e-17!6;CL:0000063!3.96e-17!66;CL:0000066!6.02e-17!25;CL:0000075!5.31e-15!7;CL:0002076!3.46e-14!15;CL:0000223!1.00e-12!20;CL:0000144!6.39e-11!121;CL:0000012!6.39e-11!121;CL:0000473!3.05e-09!3;CL:0000627!3.05e-09!3;CL:0000682!3.05e-09!3;CL:0002250!9.30e-09!3;CL:0000548!1.41e-08!115;CL:0000004!1.41e-08!115;CL:0000255!1.41e-08!115;CL:0002371!3.16e-08!118;CL:0000049!1.54e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.06e-39,9;CL:0002251,1.06e-39,9;CL:0000239,3.18e-31,6;CL:0000677,3.18e-31,6;CL:0000584,3.18e-31,6;CL:0000066,1.71e-28,25;CL:0000075,8.62e-27,7;CL:0002076,1.00e-23,15;CL:0000223,4.63e-23,20;CL:0002250,1.77e-10,3;CL:0000682,1.77e-10,3;CL:0000213,1.05e-08,1;CL:0002078,1.05e-08,1;CL:0000115,1.05e-08,1;CL:0002262,1.05e-08,1;CL:1000398,1.05e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!8.37e-25!9;UBERON:0004808!8.37e-25!9;UBERON:0001277!8.37e-25!9;UBERON:0001242!3.28e-20!13;UBERON:0000060!3.28e-20!13;UBERON:0001262!3.28e-20!13;UBERON:0004786!3.28e-20!13;UBERON:0000485!5.59e-20!11;UBERON:0000344!3.03e-17!15;UBERON:0004923!5.04e-10!24;UBERON:0000160!4.18e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.06e-39,9;UBERON:0004808,1.06e-39,9;UBERON:0001277,1.06e-39,9;UBERON:0000485,1.91e-32,11;UBERON:0001242,2.04e-27,13;UBERON:0001262,2.04e-27,13;UBERON:0004786,2.04e-27,13;UBERON:0000344,1.00e-23,15;UBERON:0004923,1.06e-14,24;UBERON:0000160,2.75e-11,31;UBERON:0002394,1.05e-08,1;UBERON:0001281,1.05e-08,1;UBERON:0000353,1.05e-08,1;UBERON:0003497,1.05e-08,1;UBERON:0003909,1.05e-08,1;UBERON:0003928,1.05e-08,1;UBERON:0003835,1.05e-08,1;UBERON:0003513,1.05e-08,1;UBERON:0001280,1.05e-08,1;UBERON:0004647,1.05e-08,1;UBERON:0002294,1.05e-08,1;UBERON:0001173,1.05e-08,1;UBERON:0004912,1.05e-08,1;UBERON:0005171,1.05e-08,1;UBERON:0003929,5.28e-08,55;UBERON:0005409,2.80e-07,47 | |||
|phase1_expression=0,4.88565570695105,2.27499619694768,17.845388467103,22.0394121176393,0.839396359559449,1.63528848416868,0,0,0,0,0,0.171200729931206,0,0,0.202475267389826,0,0.157731082679119,0.137114433605739,0,0,0.198581902401771,0,0,0,1.72269589234506,1.7230479846363,0.861884930743556,0.190023419456374,0,0,0,0,0,2.02196133825892,0.166234645358492,1.63335485009895,0,0,0,2.94115744015507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,1.79970819298022,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.69975726161829,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:101346246..101346253,+ | |||
}} |
Latest revision as of 12:48, 5 August 2015
Short description: | p@chr13:101346246..101346253, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:101346246..101346253, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.06e-39 | 9 |
epithelial cell of alimentary canal | 1.06e-39 | 9 |
brush border epithelial cell | 3.18e-31 | 6 |
gut absorptive cell | 3.18e-31 | 6 |
enterocyte | 3.18e-31 | 6 |
epithelial cell | 1.71e-28 | 25 |
columnar/cuboidal epithelial cell | 8.62e-27 | 7 |
endo-epithelial cell | 1.00e-23 | 15 |
endodermal cell | 4.63e-23 | 20 |
intestinal crypt stem cell | 1.77e-10 | 3 |
M cell of gut | 1.77e-10 | 3 |
lining cell | 1.05e-08 | 1 |
meso-epithelial cell | 1.05e-08 | 1 |
endothelial cell | 1.05e-08 | 1 |
endothelial cell of sinusoid | 1.05e-08 | 1 |
endothelial cell of hepatic sinusoid | 1.05e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.06e-39 | 9 |
gastrointestinal system epithelium | 1.06e-39 | 9 |
intestinal epithelium | 1.06e-39 | 9 |
simple columnar epithelium | 1.91e-32 | 11 |
intestinal mucosa | 2.04e-27 | 13 |
wall of intestine | 2.04e-27 | 13 |
gastrointestinal system mucosa | 2.04e-27 | 13 |
mucosa | 1.00e-23 | 15 |
organ component layer | 1.06e-14 | 24 |
intestine | 2.75e-11 | 31 |
bile duct | 1.05e-08 | 1 |
hepatic sinusoid | 1.05e-08 | 1 |
parenchyma | 1.05e-08 | 1 |
abdomen blood vessel | 1.05e-08 | 1 |
sinusoid | 1.05e-08 | 1 |
digestive system duct | 1.05e-08 | 1 |
abdominal segment blood vessel | 1.05e-08 | 1 |
trunk blood vessel | 1.05e-08 | 1 |
liver parenchyma | 1.05e-08 | 1 |
liver lobule | 1.05e-08 | 1 |
biliary system | 1.05e-08 | 1 |
biliary tree | 1.05e-08 | 1 |
biliary bud | 1.05e-08 | 1 |
hepatic duct | 1.05e-08 | 1 |
gut epithelium | 5.28e-08 | 55 |
gastrointestinal system | 2.80e-07 | 47 |