FFCP PHASE1:Mm9::chr13:100200341..100200353,-: Difference between revisions
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|id=chr13:100200341..100200353,-
|short_description=p@chr13:100200341..100200353,-
|description=CAGE_peak_at_chr13:100200341..100200353,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=158 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:100200341..100200353,- | |||
|description=CAGE_peak_at_chr13:100200341..100200353,- | |||
|id=chr13:100200341..100200353,- | |||
|ontology_enrichment_celltype=CL:0000117!2.14e-13!23;CL:0000337!2.14e-13!23;CL:0000540!1.65e-11!33;CL:0000047!1.65e-11!33;CL:0000031!1.65e-11!33;CL:0000404!1.65e-11!33;CL:0002319!3.43e-10!43;CL:0000221!1.06e-09!44;CL:0000133!1.06e-09!44;CL:0000393!3.32e-08!39;CL:0000211!3.32e-08!39;CL:0000055!2.99e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.99e-20,23;CL:0000337,4.99e-20,23;CL:0000540,1.51e-13,33;CL:0000047,1.51e-13,33;CL:0000031,1.51e-13,33;CL:0000404,1.51e-13,33;CL:0000393,3.00e-11,39;CL:0000211,3.00e-11,39;CL:0002319,4.51e-10,43;CL:0000221,8.23e-10,44;CL:0000133,8.23e-10,44;CL:0002609,5.70e-08,6;CL:0002613,1.32e-07,3;CL:0002610,2.78e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.29e-22!75;UBERON:0001016!2.29e-22!75;UBERON:0002346!2.55e-22!71;UBERON:0003075!2.55e-22!71;UBERON:0007284!2.55e-22!71;UBERON:0001017!3.27e-22!73;UBERON:0005743!3.27e-22!73;UBERON:0001049!3.18e-21!52;UBERON:0005068!3.18e-21!52;UBERON:0006241!3.18e-21!52;UBERON:0007135!3.18e-21!52;UBERON:0004121!2.60e-20!102;UBERON:0000924!2.60e-20!102;UBERON:0006601!2.60e-20!102;UBERON:0000955!3.28e-19!50;UBERON:0006238!3.28e-19!50;UBERON:0000033!4.17e-19!63;UBERON:0002616!1.89e-18!49;UBERON:0003056!4.51e-18!49;UBERON:0002020!5.44e-16!34;UBERON:0003080!1.10e-15!40;UBERON:0002780!2.50e-15!39;UBERON:0001890!2.50e-15!39;UBERON:0006240!2.50e-15!39;UBERON:0002791!4.41e-13!29;UBERON:0003528!4.41e-13!29;UBERON:0001893!4.41e-13!29;UBERON:0007811!1.45e-09!86;UBERON:0000956!5.09e-08!21;UBERON:0001869!5.09e-08!21;UBERON:0000203!5.09e-08!21;UBERON:0000153!2.19e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.48e-13,34;UBERON:0003528,7.62e-13,29;UBERON:0002791,7.62e-13,29;UBERON:0001893,7.62e-13,29;UBERON:0000073,1.76e-11,54;UBERON:0002420,2.79e-10,8;UBERON:0007245,2.79e-10,8;UBERON:0010009,2.79e-10,8;UBERON:0010011,2.79e-10,8;UBERON:0000454,2.79e-10,8;UBERON:0000369,9.26e-10,5;UBERON:0002435,9.26e-10,5;UBERON:0000204,9.26e-10,5;UBERON:0010082,9.26e-10,5;UBERON:0001017,1.28e-09,73;UBERON:0001016,2.62e-09,75;UBERON:0002780,3.05e-09,39;UBERON:0001890,3.05e-09,39;UBERON:0006240,3.05e-09,39;UBERON:0003080,5.58e-09,40;UBERON:0001049,3.19e-08,52;UBERON:0005068,3.19e-08,52;UBERON:0006241,3.19e-08,52;UBERON:0007135,3.19e-08,52;UBERON:0002616,1.20e-07,46;UBERON:0000955,1.85e-07,47;UBERON:0006238,1.85e-07,47;UBERON:0004684,2.78e-07,3;UBERON:0002275,2.78e-07,3;UBERON:0003056,4.19e-07,49;UBERON:0004121,6.40e-07,95;UBERON:0000924,6.40e-07,95;UBERON:0006601,6.40e-07,95 | |||
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| ||
|short_description=p@chr13:100200341..100200353,- | |||
}} | }} |
Latest revision as of 12:21, 5 August 2015
Short description: | p@chr13:100200341..100200353, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:100200341..100200353, - |
Coexpression cluster: | MCL_coexpression_mm9:158 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.99e-20 | 23 |
neuroblast (sensu Vertebrata) | 4.99e-20 | 23 |
neuron | 1.51e-13 | 33 |
neuronal stem cell | 1.51e-13 | 33 |
neuroblast | 1.51e-13 | 33 |
electrically signaling cell | 1.51e-13 | 33 |
electrically responsive cell | 3.00e-11 | 39 |
electrically active cell | 3.00e-11 | 39 |
neural cell | 4.51e-10 | 43 |
ectodermal cell | 8.23e-10 | 44 |
neurectodermal cell | 8.23e-10 | 44 |
neuron of cerebral cortex | 5.70e-08 | 6 |
striatum neuron | 1.32e-07 | 3 |
raphe nuclei neuron | 2.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gray matter | 2.48e-13 | 34 |
brain grey matter | 7.62e-13 | 29 |
regional part of telencephalon | 7.62e-13 | 29 |
telencephalon | 7.62e-13 | 29 |
regional part of nervous system | 1.76e-11 | 54 |
basal ganglion | 2.79e-10 | 8 |
nuclear complex of neuraxis | 2.79e-10 | 8 |
aggregate regional part of brain | 2.79e-10 | 8 |
collection of basal ganglia | 2.79e-10 | 8 |
cerebral subcortex | 2.79e-10 | 8 |
corpus striatum | 9.26e-10 | 5 |
striatum | 9.26e-10 | 5 |
ventral part of telencephalon | 9.26e-10 | 5 |
future corpus striatum | 9.26e-10 | 5 |
central nervous system | 1.28e-09 | 73 |
nervous system | 2.62e-09 | 75 |
regional part of forebrain | 3.05e-09 | 39 |
forebrain | 3.05e-09 | 39 |
future forebrain | 3.05e-09 | 39 |
anterior neural tube | 5.58e-09 | 40 |
neural tube | 3.19e-08 | 52 |
neural rod | 3.19e-08 | 52 |
future spinal cord | 3.19e-08 | 52 |
neural keel | 3.19e-08 | 52 |
regional part of brain | 1.20e-07 | 46 |
brain | 1.85e-07 | 47 |
future brain | 1.85e-07 | 47 |
raphe nuclei | 2.78e-07 | 3 |
reticular formation | 2.78e-07 | 3 |
pre-chordal neural plate | 4.19e-07 | 49 |
ectoderm-derived structure | 6.40e-07 | 95 |
ectoderm | 6.40e-07 | 95 |
presumptive ectoderm | 6.40e-07 | 95 |