FFCP PHASE1:Mm9::chr2:74517742..74517758,+: Difference between revisions
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{{FFCP|EntrezGene=15431|HGNC=|UniProt=|association_with_transcript=293bp_to_ENSMUST00000048086_5end|description=CAGE_peak_2_at_Hoxd11_5end|id=chr2:74517742..74517758,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!8.94e-17!21;UBERON:0001008!5.32e-13!17;UBERON:0006554!3.78e-12!16;UBERON:0005156!5.46e-11!26;UBERON:0000990!5.46e-11!26;UBERON:0002113!1.18e-10!14;UBERON:0003918!1.18e-10!14;UBERON:0005095!1.18e-10!14;UBERON:0007687!1.18e-10!14;UBERON:0003133!1.01e-09!24;UBERON:0000474!1.15e-08!9;UBERON:0003134!7.68e-08!8;UBERON:0002102!5.73e-07!8;UBERON:0004710!5.73e-07!8;UBERON:0005419!5.73e-07!8;UBERON:0005417!5.73e-07!8;UBERON:0005729!5.73e-07!8;UBERON:0000991!6.53e-07!18;UBERON:0005564!6.53e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0000489,2.82e-29,21;UBERON:0001008,5.35e-20,19;UBERON:0006554,1.97e-18,18;UBERON:0002113,1.22e-17,14;UBERON:0003918,1.22e-17,14;UBERON:0011143,1.22e-17,14;UBERON:0005095,1.22e-17,14;UBERON:0007687,1.22e-17,14;UBERON:0000474,4.92e-13,9;UBERON:0002102,8.34e-12,7;UBERON:0004710,8.34e-12,7;UBERON:0005419,8.34e-12,7;UBERON:0005417,8.34e-12,7;UBERON:0005729,8.34e-12,7;UBERON:0003103,1.51e-11,43;UBERON:0003134,1.76e-11,8;UBERON:0002240,4.31e-11,6;UBERON:0005174,4.31e-11,6;UBERON:0001137,4.31e-11,6;UBERON:0003100,2.38e-10,11;UBERON:0010708,3.53e-10,8;UBERON:0001948,2.17e-09,5;UBERON:0002315,2.17e-09,5;UBERON:0005156,9.01e-08,26;UBERON:0000990,9.01e-08,26;UBERON:0004175,1.61e-07,9;UBERON:0003133,3.71e-07,24;UBERON:0003975,6.93e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.61582251287033,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.57041575046086,3.97563373712904,0,0,0,0,0,0,0,0,0,0,0,0,7.95497180778903,12.9558229527184,3.91438836233131,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.82323737797119,0.373220911830279,0,0,0,0,0,0.150704817835715,0,0,0,0,3.44908788692548,5.10586416453112,6.15828934573821,2.41115305670332,5.56094498451196,3.48252166522167,4.52720700097476,1.79130840136644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69234151177515,2.09013004674395,1.9330119198314,0.201683524623343,0.667134131534611,0.380451252225118,0,0.494096864172033,1.00534083520108,1.79060824837036,1.55971269695296,0,0.432276099749388,0.597423819763102,10.2420666514664,5.36968009265725,6.76246414038483,8.96065842519383,10.0855293327165,10.5203729835478,10.6869747739995,4.28069429140846,4.08196692387575,3.08492909804501,0,0.500535317148282,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.780877488593277,0,0,0,0,0,0,0,0,2.55492153374884,5.87616492101942,9.12166972380026,5.44401405809367,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,8.91752490642099,0.42366414172764,0.882113592219848,0,0.484393280087717,0.542816324353403,0.716234064018819,1.80554989719567,0,8.34413859047294,0,0,0,0,0,0,0.339956859987711,0.979660166265606,0.690999869022119,0,0,0.406638934253697,0,0,0,0,0,0,0.648074866458964,0,0,0.747582730219894,1.15820943319968,0.583353565032143,0.516639293910924,0.337912250981556,0.704143431874524,0.781226309063701,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.335769232728157,21.2508553435409,13.3254557570339,17.5825559296574,5.78794623513478,4.51414893631827,0,0,0,0,0,0,0,0,0,0,1.97195960409936,2.79317411380722,1.02440163452481,0.486213434136588,1.04806581313991,0.551530525350042,0.666740183404846,0.206035057238894,0.962757628775446,0.505394423527595,0.25347929989024,0.565879024158229,0.468207537349412,0.704276676453562,0.689225627467359,0.952587382566147,1.0429589335037,0.964546102318525,1.23625770240992,0.147198920134397,0.685738504770831,0.177475806159338,0.715308569841963,0.726732083161643,0.376437521661322,0.423073039458382,0.73171189149109,0.789209134313529,0.407412341537585,2.24456908663095,0.474540072496697,0.886540341380071,0.409231043169689,0.464810523557898,0.771626443924566,0,0.467863216890817,0.859484216193193,1.14772999241306,1.54413993383661,0.463735671240843|short_description=p2@Hoxd11}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15431 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=293bp_to_ENSMUST00000048086_5end | |||
|cluster_id=chr2:74517742..74517758,+ | |||
|description=CAGE_peak_2_at_Hoxd11_5end | |||
|id=chr2:74517742..74517758,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!8.94e-17!21;UBERON:0001008!5.32e-13!17;UBERON:0006554!3.78e-12!16;UBERON:0005156!5.46e-11!26;UBERON:0000990!5.46e-11!26;UBERON:0002113!1.18e-10!14;UBERON:0003918!1.18e-10!14;UBERON:0005095!1.18e-10!14;UBERON:0007687!1.18e-10!14;UBERON:0003133!1.01e-09!24;UBERON:0000474!1.15e-08!9;UBERON:0003134!7.68e-08!8;UBERON:0002102!5.73e-07!8;UBERON:0004710!5.73e-07!8;UBERON:0005419!5.73e-07!8;UBERON:0005417!5.73e-07!8;UBERON:0005729!5.73e-07!8;UBERON:0000991!6.53e-07!18;UBERON:0005564!6.53e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,2.82e-29,21;UBERON:0001008,5.35e-20,19;UBERON:0006554,1.97e-18,18;UBERON:0002113,1.22e-17,14;UBERON:0003918,1.22e-17,14;UBERON:0011143,1.22e-17,14;UBERON:0005095,1.22e-17,14;UBERON:0007687,1.22e-17,14;UBERON:0000474,4.92e-13,9;UBERON:0002102,8.34e-12,7;UBERON:0004710,8.34e-12,7;UBERON:0005419,8.34e-12,7;UBERON:0005417,8.34e-12,7;UBERON:0005729,8.34e-12,7;UBERON:0003103,1.51e-11,43;UBERON:0003134,1.76e-11,8;UBERON:0002240,4.31e-11,6;UBERON:0005174,4.31e-11,6;UBERON:0001137,4.31e-11,6;UBERON:0003100,2.38e-10,11;UBERON:0010708,3.53e-10,8;UBERON:0001948,2.17e-09,5;UBERON:0002315,2.17e-09,5;UBERON:0005156,9.01e-08,26;UBERON:0000990,9.01e-08,26;UBERON:0004175,1.61e-07,9;UBERON:0003133,3.71e-07,24;UBERON:0003975,6.93e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.61582251287033,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.57041575046086,3.97563373712904,0,0,0,0,0,0,0,0,0,0,0,0,7.95497180778903,12.9558229527184,3.91438836233131,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.82323737797119,0.373220911830279,0,0,0,0,0,0.150704817835715,0,0,0,0,3.44908788692548,5.10586416453112,6.15828934573821,2.41115305670332,5.56094498451196,3.48252166522167,4.52720700097476,1.79130840136644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69234151177515,2.09013004674395,1.9330119198314,0.201683524623343,0.667134131534611,0.380451252225118,0,0.494096864172033,1.00534083520108,1.79060824837036,1.55971269695296,0,0.432276099749388,0.597423819763102,10.2420666514664,5.36968009265725,6.76246414038483,8.96065842519383,10.0855293327165,10.5203729835478,10.6869747739995,4.28069429140846,4.08196692387575,3.08492909804501,0,0.500535317148282,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.780877488593277,0,0,0,0,0,0,0,0,2.55492153374884,5.87616492101942,9.12166972380026,5.44401405809367,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,8.91752490642099,0.42366414172764,0.882113592219848,0,0.484393280087717,0.542816324353403,0.716234064018819,1.80554989719567,0,8.34413859047294,0,0,0,0,0,0,0.339956859987711,0.979660166265606,0.690999869022119,0,0,0.406638934253697,0,0,0,0,0,0,0.648074866458964,0,0,0.747582730219894,1.15820943319968,0.583353565032143,0.516639293910924,0.337912250981556,0.704143431874524,0.781226309063701,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.335769232728157,21.2508553435409,13.3254557570339,17.5825559296574,5.78794623513478,4.51414893631827,0,0,0,0,0,0,0,0,0,0,1.97195960409936,2.79317411380722,1.02440163452481,0.486213434136588,1.04806581313991,0.551530525350042,0.666740183404846,0.206035057238894,0.962757628775446,0.505394423527595,0.25347929989024,0.565879024158229,0.468207537349412,0.704276676453562,0.689225627467359,0.952587382566147,1.0429589335037,0.964546102318525,1.23625770240992,0.147198920134397,0.685738504770831,0.177475806159338,0.715308569841963,0.726732083161643,0.376437521661322,0.423073039458382,0.73171189149109,0.789209134313529,0.407412341537585,2.24456908663095,0.474540072496697,0.886540341380071,0.409231043169689,0.464810523557898,0.771626443924566,0,0.467863216890817,0.859484216193193,1.14772999241306,1.54413993383661,0.463735671240843 | |||
|short_description=p2@Hoxd11 | |||
}} |
Revision as of 11:15, 5 August 2015
Short description: | p2@Hoxd11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Hoxd11_5end |
Coexpression cluster: | NA |
Association with transcript: | 293bp_to_ENSMUST00000048086_5end |
EntrezGene: | 15431 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 2.82e-29 | 21 |
renal system | 5.35e-20 | 19 |
urinary system structure | 1.97e-18 | 18 |
kidney | 1.22e-17 | 14 |
kidney mesenchyme | 1.22e-17 | 14 |
upper urinary tract | 1.22e-17 | 14 |
kidney rudiment | 1.22e-17 | 14 |
kidney field | 1.22e-17 | 14 |
female reproductive system | 4.92e-13 | 9 |
forelimb | 8.34e-12 | 7 |
pectoral appendage | 8.34e-12 | 7 |
pectoral appendage bud | 8.34e-12 | 7 |
forelimb bud | 8.34e-12 | 7 |
forelimb/pectoral fin field | 8.34e-12 | 7 |
compound organ | 1.51e-11 | 43 |
female reproductive organ | 1.76e-11 | 8 |
spinal cord | 4.31e-11 | 6 |
dorsal region element | 4.31e-11 | 6 |
dorsum | 4.31e-11 | 6 |
female organism | 2.38e-10 | 11 |
pectoral complex | 3.53e-10 | 8 |
regional part of spinal cord | 2.17e-09 | 5 |
gray matter of spinal cord | 2.17e-09 | 5 |
reproductive structure | 9.01e-08 | 26 |
reproductive system | 9.01e-08 | 26 |
internal genitalia | 1.61e-07 | 9 |
reproductive organ | 3.71e-07 | 24 |
internal female genitalia | 6.93e-07 | 5 |