FFCP PHASE1:Mm9::chr1:187180914..187180924,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:187180914..187180924,+ | |||
|description=CAGE_peak_at_chr1:187180914..187180924,+ | |description=CAGE_peak_at_chr1:187180914..187180924,+ | ||
|id=chr1:187180914..187180924,+ | |id=chr1:187180914..187180924,+ | ||
|ontology_enrichment_celltype=CL:0000066!8.71e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.06e-12,25;CL:0002563,8.97e-12,9;CL:0002251,8.97e-12,9;CL:0000223,2.23e-10,20;CL:0002076,3.22e-09,15;CL:0000239,4.75e-09,6;CL:0000677,4.75e-09,6;CL:0000584,4.75e-09,6;CL:0000075,1.36e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.16e-12!43;UBERON:0005409!1.03e-10!59;UBERON:0000344!8.74e-10!15;UBERON:0001242!1.39e-08!13;UBERON:0000060!1.39e-08!13;UBERON:0001262!1.39e-08!13;UBERON:0004786!1.39e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.55e-31,31;UBERON:0005409,1.04e-25,47;UBERON:0000344,5.25e-19,15;UBERON:0001242,1.85e-16,13;UBERON:0001262,1.85e-16,13;UBERON:0004786,1.85e-16,13;UBERON:0001007,3.21e-13,116;UBERON:0001555,3.21e-13,116;UBERON:0007026,3.21e-13,116;UBERON:0004119,8.77e-13,118;UBERON:0000925,8.77e-13,118;UBERON:0006595,8.77e-13,118;UBERON:0003350,8.97e-12,9;UBERON:0004808,8.97e-12,9;UBERON:0001277,8.97e-12,9;UBERON:0004921,9.74e-12,114;UBERON:0004923,3.27e-10,24;UBERON:0000485,3.13e-09,11 | |||
|phase1_expression=0.640595388419176,5.58360652222978,7.73498706962211,3.93203474698879,11.0197060588196,2.01455126294268,3.27057696833736,0,0.422366166455,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0.157731082679119,0.274228867211478,0,1.10556277196391,0.992909512008853,0,5.27974995218242,4.12936705920906,6.89078356938024,8.61523992318149,4.95583835177545,3.80046838912748,3.02436155711917,1.55211357458713,0,0,0,1.1554064790051,3.65716219788683,1.63335485009895,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.550640256485045,0,0.436050312760893,0,0.388859798148567,0.139986421625363,0,0.503347818173209,0.725362142011344,0,0,0,0,0.202316460859598,0.528990979272033,0,0.338844532069132,0,0,1.97773272513395,0,0.898800331555214,1.15265491596466,0,0,0.210324961351382,0.571301968807607,0.883474163806454,0.122490799214954,0.0958454710182364,0,0,0.383062014255563,0,0.263772575460388,0,0,0.279182999001381,0.56276261003168,0.45839474333043,0.883885756421003,0.569486723196412,0.372798891650601,1.36307147999731,0.529000920747499,0.289864488701678,0.860423876981386,1.3599426674155,1.61910957491345,3.24888208723835,0.448026887097336,1.68533304158102,0,0.259786004602869,0,0.281686839553361,0,0,0,1.73192832808971,1.52015919285059,0.505524445014783,2.62622923353838,0,0.29688427812965,0.520455980298408,0,0.922461989024234,0.150722640552623,0.587943535678524,0.879666139307728,0,0.289198713839823,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.585561594023094,2.09446706813455,3.0654846625031,0,0,0.381210681219194,0.299581278809645,0.915001205637253,0,0.347648640384553,0.767146371990992,0.62336413367868,0.486723789203273,0.101839363850316,0.373220911830279,1.0108910337347,0.631325567659422,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.272145996605311,0.512454881139399,0.281105173679186,1.29351685369508,0.215567992932842,0.756424320671277,0.175951124163949,0,0,0,0.411564272815887,0.59710280045548,0,0,0.852490498186778,0.207125772535502,0.234526059981096,0.540186184383045,0.473489471170421,0,0.308534225774757,0.465067889500816,1.07309360559848,0.350296027101508,0.329119699826961,0.492502392237286,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,0.841159794256509,0.411618449517138,12.5559137533843,7.66906643324278,0,0,1.03093969057675,4.23535401709019,5.55945109612176,2.66315876557583,9.01605216934572,9.0584425098206,4.52403375840485,4.37704238490532,1.16978452271472,4.49409704327111,7.78096979548899,8.16479220342906,0.379335801906163,0.342745537829186,1.1270773567308,0.203651327845314,0.387904974335251,1.1221731182451,0.758838445491087,1.32849133181642,5.80895293013087,5.18268088471562,0.889357881261447,0,0.196558995113203,0,0,0,0,0,0.324270453550071,2.47105271869273,1.43768206527355,0.744281895337007,0.936113019343682,0.757736633841335,1.79397413521912,2.8946611281802,0.554259570499814,0,0.325929952884052,0.848725428875941,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0,1.14704320301017,0.690739927463582,0.578596234326046,0,0,1.47529281905711,0,0.321101179975584,0.820481806145422,0.491804836130026,0.252470927204373,0,0,0.215423397732799,0,0.222798674082394,0,0.809621403349789,0,0,0.963963949265421,0.283880170416537,0.35613120733451,0.162886959353576,0,1.32745138339963,0,0.906970670894253,0.943025398779491,0.295301892880773,0.307435147943927,1.55056975900933,0.363533729477506,1.06949213515416,0.948110273807448,0,0,1.36175842301515,0.540183282093931,0,0.214337035031592,0.354680467284547,0.535106452806212,0.987294123612726,0.608929898229199,0.704015124191131,0.21183207086382,0.661585194164886,0,0,0.0603129249281559,0.238744688006273,0.328281799490123,3.78925087618806,0.556275906031529,0.170870880797853,0,0,0.188368457004691,0,0,0,0.279902904647316,0.276399947608848,5.72802370809068,0.158167996790568,0.406638934253697,1.18805874903981,1.46361807210128,0.87345025498471,0.404593039154462,0.41326727862668,4.18809507174447,2.59229946583586,0.621339313086926,0.56369293868419,0.299033092087958,0.330916980914195,0.583353565032143,0,0.337912250981556,0,0.13020438484395,0.104859344425711,0.483168241652012,0.576060012515731,0,0,0.308132871494482,0.25984164595559,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0.288635524920988,0,0.226730383615211,0.221985953374065,0.717710852875806,0,0.386379188064381,1.31377732815827,0,0.214368379079066,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0.51776031175182,0.207574695168353,0,0,0,0,0.735374033800057,0.44449345560323,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.655490552289177,0.256100609619477,0.574354689556133,0.476293691283074,0.231768651889711,0.578727661391115,0.412085900803307,0.294397840268795,0.685738504770831,0.354951612318675,1.1921809497366,0.290692833264657,0.470546902076653,0.338458431566706,0.73171189149109,0.789209134313529,0.135804113845862,0.561142271657738,0.474540072496697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| |phase1_expression=0.640595388419176,5.58360652222978,7.73498706962211,3.93203474698879,11.0197060588196,2.01455126294268,3.27057696833736,0,0.422366166455,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0.157731082679119,0.274228867211478,0,1.10556277196391,0.992909512008853,0,5.27974995218242,4.12936705920906,6.89078356938024,8.61523992318149,4.95583835177545,3.80046838912748,3.02436155711917,1.55211357458713,0,0,0,1.1554064790051,3.65716219788683,1.63335485009895,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.550640256485045,0,0.436050312760893,0,0.388859798148567,0.139986421625363,0,0.503347818173209,0.725362142011344,0,0,0,0,0.202316460859598,0.528990979272033,0,0.338844532069132,0,0,1.97773272513395,0,0.898800331555214,1.15265491596466,0,0,0.210324961351382,0.571301968807607,0.883474163806454,0.122490799214954,0.0958454710182364,0,0,0.383062014255563,0,0.263772575460388,0,0,0.279182999001381,0.56276261003168,0.45839474333043,0.883885756421003,0.569486723196412,0.372798891650601,1.36307147999731,0.529000920747499,0.289864488701678,0.860423876981386,1.3599426674155,1.61910957491345,3.24888208723835,0.448026887097336,1.68533304158102,0,0.259786004602869,0,0.281686839553361,0,0,0,1.73192832808971,1.52015919285059,0.505524445014783,2.62622923353838,0,0.29688427812965,0.520455980298408,0,0.922461989024234,0.150722640552623,0.587943535678524,0.879666139307728,0,0.289198713839823,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.585561594023094,2.09446706813455,3.0654846625031,0,0,0.381210681219194,0.299581278809645,0.915001205637253,0,0.347648640384553,0.767146371990992,0.62336413367868,0.486723789203273,0.101839363850316,0.373220911830279,1.0108910337347,0.631325567659422,0.130120442962704,0.229902104433473,0.180062129805349,0.30140963567143,0.272145996605311,0.512454881139399,0.281105173679186,1.29351685369508,0.215567992932842,0.756424320671277,0.175951124163949,0,0,0,0.411564272815887,0.59710280045548,0,0,0.852490498186778,0.207125772535502,0.234526059981096,0.540186184383045,0.473489471170421,0,0.308534225774757,0.465067889500816,1.07309360559848,0.350296027101508,0.329119699826961,0.492502392237286,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,0.841159794256509,0.411618449517138,12.5559137533843,7.66906643324278,0,0,1.03093969057675,4.23535401709019,5.55945109612176,2.66315876557583,9.01605216934572,9.0584425098206,4.52403375840485,4.37704238490532,1.16978452271472,4.49409704327111,7.78096979548899,8.16479220342906,0.379335801906163,0.342745537829186,1.1270773567308,0.203651327845314,0.387904974335251,1.1221731182451,0.758838445491087,1.32849133181642,5.80895293013087,5.18268088471562,0.889357881261447,0,0.196558995113203,0,0,0,0,0,0.324270453550071,2.47105271869273,1.43768206527355,0.744281895337007,0.936113019343682,0.757736633841335,1.79397413521912,2.8946611281802,0.554259570499814,0,0.325929952884052,0.848725428875941,0,0,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0,1.14704320301017,0.690739927463582,0.578596234326046,0,0,1.47529281905711,0,0.321101179975584,0.820481806145422,0.491804836130026,0.252470927204373,0,0,0.215423397732799,0,0.222798674082394,0,0.809621403349789,0,0,0.963963949265421,0.283880170416537,0.35613120733451,0.162886959353576,0,1.32745138339963,0,0.906970670894253,0.943025398779491,0.295301892880773,0.307435147943927,1.55056975900933,0.363533729477506,1.06949213515416,0.948110273807448,0,0,1.36175842301515,0.540183282093931,0,0.214337035031592,0.354680467284547,0.535106452806212,0.987294123612726,0.608929898229199,0.704015124191131,0.21183207086382,0.661585194164886,0,0,0.0603129249281559,0.238744688006273,0.328281799490123,3.78925087618806,0.556275906031529,0.170870880797853,0,0,0.188368457004691,0,0,0,0.279902904647316,0.276399947608848,5.72802370809068,0.158167996790568,0.406638934253697,1.18805874903981,1.46361807210128,0.87345025498471,0.404593039154462,0.41326727862668,4.18809507174447,2.59229946583586,0.621339313086926,0.56369293868419,0.299033092087958,0.330916980914195,0.583353565032143,0,0.337912250981556,0,0.13020438484395,0.104859344425711,0.483168241652012,0.576060012515731,0,0,0.308132871494482,0.25984164595559,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0.288635524920988,0,0.226730383615211,0.221985953374065,0.717710852875806,0,0.386379188064381,1.31377732815827,0,0.214368379079066,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0.51776031175182,0.207574695168353,0,0,0,0,0.735374033800057,0.44449345560323,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.655490552289177,0.256100609619477,0.574354689556133,0.476293691283074,0.231768651889711,0.578727661391115,0.412085900803307,0.294397840268795,0.685738504770831,0.354951612318675,1.1921809497366,0.290692833264657,0.470546902076653,0.338458431566706,0.73171189149109,0.789209134313529,0.135804113845862,0.561142271657738,0.474540072496697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| ||
|short_description=p@chr1:187180914..187180924,+ | |short_description=p@chr1:187180914..187180924,+ | ||
}} | }} |
Latest revision as of 10:59, 5 August 2015
Short description: | p@chr1:187180914..187180924, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:187180914..187180924, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.06e-12 | 25 |
intestinal epithelial cell | 8.97e-12 | 9 |
epithelial cell of alimentary canal | 8.97e-12 | 9 |
endodermal cell | 2.23e-10 | 20 |
endo-epithelial cell | 3.22e-09 | 15 |
brush border epithelial cell | 4.75e-09 | 6 |
gut absorptive cell | 4.75e-09 | 6 |
enterocyte | 4.75e-09 | 6 |
columnar/cuboidal epithelial cell | 1.36e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.55e-31 | 31 |
gastrointestinal system | 1.04e-25 | 47 |
mucosa | 5.25e-19 | 15 |
intestinal mucosa | 1.85e-16 | 13 |
wall of intestine | 1.85e-16 | 13 |
gastrointestinal system mucosa | 1.85e-16 | 13 |
digestive system | 3.21e-13 | 116 |
digestive tract | 3.21e-13 | 116 |
primitive gut | 3.21e-13 | 116 |
endoderm-derived structure | 8.77e-13 | 118 |
endoderm | 8.77e-13 | 118 |
presumptive endoderm | 8.77e-13 | 118 |
epithelium of mucosa | 8.97e-12 | 9 |
gastrointestinal system epithelium | 8.97e-12 | 9 |
intestinal epithelium | 8.97e-12 | 9 |
subdivision of digestive tract | 9.74e-12 | 114 |
organ component layer | 3.27e-10 | 24 |
simple columnar epithelium | 3.13e-09 | 11 |