FFCP PHASE1:Mm9::chr4:40186746..40186760,-: Difference between revisions
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{{FFCP|EntrezGene=230073|HGNC=|MCL_coexpression_id=2684|UniProt=|association_with_transcript=0bp_to_ENSMUST00000127026_5end|description=CAGE_peak_3_at_Ddx58_5end|id=chr4:40186746..40186760,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000222,1.49e-07,7;CL:0000239,4.26e-07,6;CL:0000677,4.26e-07,6;CL:0000584,4.26e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!7.28e-09!130;UBERON:0000925!7.28e-09!130;UBERON:0006595!7.28e-09!130;UBERON:0004177!9.32e-09!29;UBERON:0001007!1.88e-08!128;UBERON:0001555!1.88e-08!128;UBERON:0007026!1.88e-08!128;UBERON:0002193!7.94e-08!48;UBERON:0004921!1.30e-07!126;UBERON:0004185!1.30e-07!126;UBERON:0003408!1.88e-07!24;UBERON:0006562!3.58e-07!24;UBERON:0001557!3.58e-07!24;UBERON:0001042!3.58e-07!24;UBERON:0008814!3.58e-07!24;UBERON:0009145!3.58e-07!24;UBERON:0002370!4.88e-07!23;UBERON:0000974!4.88e-07!23;UBERON:0004807!4.88e-07!23;UBERON:0005058!4.88e-07!23;UBERON:0003351!4.88e-07!23;UBERON:0009113!4.88e-07!23;UBERON:0003295!4.88e-07!23;UBERON:0009722!4.88e-07!23;UBERON:0005562!4.88e-07!23;UBERON:0007690!4.88e-07!23;UBERON:0000072!4.92e-07!27;UBERON:0003081!5.64e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.19e-12,48;UBERON:0002405,1.19e-12,48;UBERON:0000490,2.62e-11,66;UBERON:0000077,3.42e-11,35;UBERON:0004177,4.72e-11,29;UBERON:0005057,4.72e-11,29;UBERON:0003408,7.98e-11,24;UBERON:0002370,5.56e-10,23;UBERON:0000974,5.56e-10,23;UBERON:0004807,5.56e-10,23;UBERON:0005058,5.56e-10,23;UBERON:0003351,5.56e-10,23;UBERON:0009113,5.56e-10,23;UBERON:0003295,5.56e-10,23;UBERON:0009722,5.56e-10,23;UBERON:0005562,5.56e-10,23;UBERON:0007690,5.56e-10,23;UBERON:0002390,1.15e-09,45;UBERON:0003061,1.15e-09,45;UBERON:0006562,2.05e-09,24;UBERON:0001557,2.05e-09,24;UBERON:0001042,2.05e-09,24;UBERON:0008814,2.05e-09,24;UBERON:0009145,2.05e-09,24;UBERON:0003929,2.91e-09,55;UBERON:0000072,3.99e-09,27;UBERON:0001007,5.34e-08,116;UBERON:0001555,5.34e-08,116;UBERON:0007026,5.34e-08,116;UBERON:0004119,1.04e-07,118;UBERON:0000925,1.04e-07,118;UBERON:0006595,1.04e-07,118;UBERON:0005911,1.31e-07,69;UBERON:0001004,6.07e-07,42;UBERON:0007811,6.95e-07,36;UBERON:0004921,9.56e-07,114|phase1_expression=0,10.1202868215415,9.55498402718026,1.20985684522732,0,5.54001597309236,5.60670337429262,0.774739940649458,0.84473233291,2.10658073689794,0.171217968225505,0.319088635981346,1.88320802924326,0.611942816932982,0.333109761815663,0.202475267389826,0,1.89277299214943,1.50825876966313,0,0.510259740906419,0.198581902401771,0.261199789138935,7.35965144849671,5.96464130774642,9.76194338995534,5.1691439539089,7.97243560937789,0.570070258369122,0.252030129759931,3.99114919179548,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0.485510353031154,2.26614272356039,1.82478476195126,0.734187008646726,0,0,0.219686182734472,0,0.139986421625363,0,1.00669563634642,1.45072428402269,1.00828139742739,2.05807548828758,1.71920063963254,1.03134418455488,0,0,0,0,0.889294796111139,0,0,0.7104801149461,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0.377857800533928,10.4351215932604,2.58127163094416,0.679971333707751,0,1.29955283489534,0,0.561777680527007,0,0,0,0,0,0,0,1.08245520505607,0.506719730950197,0,0.34255163915718,5.69663344023778,0.742210695324124,0.173485326766136,0.304465478312141,0,0.150722640552623,0.352766121407114,0,0.247194967734374,0.433798070759735,0.884610551949874,0.323533699894818,0,1.93950101254089,0,0,0,0.255457055208591,0.239630249011841,0,0.127070227073065,0,0.457500602818626,0,0,0,0.20778804455956,0,0.509196819251581,0.497627882440372,0,1.26265113531884,0.390361328888111,0,0,0.150704817835715,0,0,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.162137619091711,0.438599962275997,0.878200461164203,0.268412837520744,0,0,0.660837565967596,0.793351699990633,0,0,0,0.403367049246685,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.397912944082302,0.19496408711912,1.79763881730844,0.648414149624083,0.199141273254367,0.189667900953082,0.342745537829186,0,0.407302655690628,0,0.210407459670956,0.189709611372772,0.442830443938806,1.09899109488962,0.246794327843601,0.592905254174298,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0.274561413188081,0,0.372140947668503,0,1.26289438973556,0.717589654087649,0.964887042726734,1.29327233116623,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0.221464689648775,0.478364305972461,1.14704320301017,0.863424909329478,0.433947175744535,1.50791283939272,11.4220193601929,0.983528546038072,0.551873492609465,0,0,0.491804836130026,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0,0,0.425820255624806,0.35613120733451,0.651547837414304,0.659880491890142,0,0,0,0.377210159511796,0.295301892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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:230073 | |||
|HGNC= | |||
|MCL_coexpression_id=2684 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000127026_5end | |||
|cluster_id=chr4:40186746..40186760,- | |||
|description=CAGE_peak_3_at_Ddx58_5end | |||
|id=chr4:40186746..40186760,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.49e-07,7;CL:0000239,4.26e-07,6;CL:0000677,4.26e-07,6;CL:0000584,4.26e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!7.28e-09!130;UBERON:0000925!7.28e-09!130;UBERON:0006595!7.28e-09!130;UBERON:0004177!9.32e-09!29;UBERON:0001007!1.88e-08!128;UBERON:0001555!1.88e-08!128;UBERON:0007026!1.88e-08!128;UBERON:0002193!7.94e-08!48;UBERON:0004921!1.30e-07!126;UBERON:0004185!1.30e-07!126;UBERON:0003408!1.88e-07!24;UBERON:0006562!3.58e-07!24;UBERON:0001557!3.58e-07!24;UBERON:0001042!3.58e-07!24;UBERON:0008814!3.58e-07!24;UBERON:0009145!3.58e-07!24;UBERON:0002370!4.88e-07!23;UBERON:0000974!4.88e-07!23;UBERON:0004807!4.88e-07!23;UBERON:0005058!4.88e-07!23;UBERON:0003351!4.88e-07!23;UBERON:0009113!4.88e-07!23;UBERON:0003295!4.88e-07!23;UBERON:0009722!4.88e-07!23;UBERON:0005562!4.88e-07!23;UBERON:0007690!4.88e-07!23;UBERON:0000072!4.92e-07!27;UBERON:0003081!5.64e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.19e-12,48;UBERON:0002405,1.19e-12,48;UBERON:0000490,2.62e-11,66;UBERON:0000077,3.42e-11,35;UBERON:0004177,4.72e-11,29;UBERON:0005057,4.72e-11,29;UBERON:0003408,7.98e-11,24;UBERON:0002370,5.56e-10,23;UBERON:0000974,5.56e-10,23;UBERON:0004807,5.56e-10,23;UBERON:0005058,5.56e-10,23;UBERON:0003351,5.56e-10,23;UBERON:0009113,5.56e-10,23;UBERON:0003295,5.56e-10,23;UBERON:0009722,5.56e-10,23;UBERON:0005562,5.56e-10,23;UBERON:0007690,5.56e-10,23;UBERON:0002390,1.15e-09,45;UBERON:0003061,1.15e-09,45;UBERON:0006562,2.05e-09,24;UBERON:0001557,2.05e-09,24;UBERON:0001042,2.05e-09,24;UBERON:0008814,2.05e-09,24;UBERON:0009145,2.05e-09,24;UBERON:0003929,2.91e-09,55;UBERON:0000072,3.99e-09,27;UBERON:0001007,5.34e-08,116;UBERON:0001555,5.34e-08,116;UBERON:0007026,5.34e-08,116;UBERON:0004119,1.04e-07,118;UBERON:0000925,1.04e-07,118;UBERON:0006595,1.04e-07,118;UBERON:0005911,1.31e-07,69;UBERON:0001004,6.07e-07,42;UBERON:0007811,6.95e-07,36;UBERON:0004921,9.56e-07,114 | |||
|phase1_expression=0,10.1202868215415,9.55498402718026,1.20985684522732,0,5.54001597309236,5.60670337429262,0.774739940649458,0.84473233291,2.10658073689794,0.171217968225505,0.319088635981346,1.88320802924326,0.611942816932982,0.333109761815663,0.202475267389826,0,1.89277299214943,1.50825876966313,0,0.510259740906419,0.198581902401771,0.261199789138935,7.35965144849671,5.96464130774642,9.76194338995534,5.1691439539089,7.97243560937789,0.570070258369122,0.252030129759931,3.99114919179548,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0.485510353031154,2.26614272356039,1.82478476195126,0.734187008646726,0,0,0.219686182734472,0,0.139986421625363,0,1.00669563634642,1.45072428402269,1.00828139742739,2.05807548828758,1.71920063963254,1.03134418455488,0,0,0,0,0.889294796111139,0,0,0.7104801149461,0.299600110518405,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0.377857800533928,10.4351215932604,2.58127163094416,0.679971333707751,0,1.29955283489534,0,0.561777680527007,0,0,0,0,0,0,0,1.08245520505607,0.506719730950197,0,0.34255163915718,5.69663344023778,0.742210695324124,0.173485326766136,0.304465478312141,0,0.150722640552623,0.352766121407114,0,0.247194967734374,0.433798070759735,0.884610551949874,0.323533699894818,0,1.93950101254089,0,0,0,0.255457055208591,0.239630249011841,0,0.127070227073065,0,0.457500602818626,0,0,0,0.20778804455956,0,0.509196819251581,0.497627882440372,0,1.26265113531884,0.390361328888111,0,0,0.150704817835715,0,0,0.0937017245597288,0.258703370739016,0,0,0,0.219195732427575,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0,0,0,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.162137619091711,0.438599962275997,0.878200461164203,0.268412837520744,0,0,0.660837565967596,0.793351699990633,0,0,0,0.403367049246685,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0.397912944082302,0.19496408711912,1.79763881730844,0.648414149624083,0.199141273254367,0.189667900953082,0.342745537829186,0,0.407302655690628,0,0.210407459670956,0.189709611372772,0.442830443938806,1.09899109488962,0.246794327843601,0.592905254174298,0,0,0,0,0,0.25462585178142,0.575392274901621,0,0.274561413188081,0,0.372140947668503,0,1.26289438973556,0.717589654087649,0.964887042726734,1.29327233116623,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0.221464689648775,0.478364305972461,1.14704320301017,0.863424909329478,0.433947175744535,1.50791283939272,11.4220193601929,0.983528546038072,0.551873492609465,0,0,0.491804836130026,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0.404810701674894,0,0,0,0.425820255624806,0.35613120733451,0.651547837414304,0.659880491890142,0,0,0,0.377210159511796,0.295301892880773,0.614870295887855,0,1.45413491791002,0.712994756769443,0.632073515871632,1.05418608574999,2.06271086496374,0.340439605753788,0.18006109403131,0,0,0.177340233642274,0,0,0,0.704015124191131,0.42366414172764,0.220528398054962,0.49465875882444,0.484393280087717,0.241251699712623,0.119372344003136,0,1.45740418314925,0,1.53783792718067,0.206386867963223,0.555583582109135,0.753473828018764,1.50363650493128,1.37266903923914,1.5298058699447,1.25956307091292,1.10559979043539,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0,0.26175594198403,0.129614973291793,1.24267862617385,0,0.299033092087958,0.165458490457098,0.194451188344048,0,0.337912250981556,0.234714477291508,0.13020438484395,0,0,0,1.89606672376907,2.22997736819181,2.97861775777999,2.33857481360031,2.32734704367726,2.18549490259391,1.9231271923195,1.47689527174577,2.22126189885925,0.762068066549998,0.705783295957884,1.36441033035653,1.15454209968395,1.16876902181569,0.453460767230423,0.221985953374065,0,0,0.386379188064381,0.563047426353546,1.09890974560359,1.92931541171159,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0,0.188626341386076,0.187283014939765,0.256100609619477,0,0.952587382566147,0,0.192909220463705,0,0.147198920134397,0.685738504770831,0.532427418478012,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0,0.263069711437843,0.543216455383447,1.12228454331548,0.118635018124174,0.197008964751127,0.409231043169689,0.619747364743864,0,0.249810577937946,0,0.644613162144895,0,0.220591419119515,0.231867835620421 | |||
|short_description=p3@Ddx58 | |||
}} |
Revision as of 10:21, 5 August 2015
Short description: | p3@Ddx58 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ddx58_5end |
Coexpression cluster: | MCL_coexpression_mm9:2684 |
Association with transcript: | 0bp_to_ENSMUST00000127026_5end |
EntrezGene: | 230073 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.49e-07 | 7 |
brush border epithelial cell | 4.26e-07 | 6 |
gut absorptive cell | 4.26e-07 | 6 |
enterocyte | 4.26e-07 | 6 |