FFCP PHASE1:Mm9::chr6:145093993..145094003,+: Difference between revisions
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{{FFCP|EntrezGene=16970|HGNC=|MCL_coexpression_id=331|UniProt=F6WLY0,Q3TL84|association_with_transcript=0bp_to_ENSMUST00000125029,ENSMUST00000132948,uc009era.1_5end|description=CAGE_peak_6_at_Lrmp_5end|id=chr6:145093993..145094003,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002250,6.01e-12,3;CL:0002563,8.66e-11,9;CL:0002251,8.66e-11,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!4.00e-12!128;UBERON:0001555!4.00e-12!128;UBERON:0007026!4.00e-12!128;UBERON:0004119!9.48e-12!130;UBERON:0000925!9.48e-12!130;UBERON:0006595!9.48e-12!130;UBERON:0005409!5.29e-11!59;UBERON:0004921!1.34e-10!126;UBERON:0004185!1.34e-10!126;UBERON:0000344!1.37e-09!15;UBERON:0001242!3.96e-07!13;UBERON:0000060!3.96e-07!13;UBERON:0001262!3.96e-07!13;UBERON:0004786!3.96e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.52e-20,15;UBERON:0005409,1.90e-15,47;UBERON:0001242,4.62e-14,13;UBERON:0001262,4.62e-14,13;UBERON:0004786,4.62e-14,13;UBERON:0004923,6.03e-12,24;UBERON:0000160,8.49e-11,31;UBERON:0003350,8.66e-11,9;UBERON:0004808,8.66e-11,9;UBERON:0001277,8.66e-11,9;UBERON:0001007,1.32e-09,116;UBERON:0001555,1.32e-09,116;UBERON:0007026,1.32e-09,116;UBERON:0004119,2.21e-09,118;UBERON:0000925,2.21e-09,118;UBERON:0006595,2.21e-09,118;UBERON:0001962,5.73e-09,2;UBERON:0001961,5.73e-09,2;UBERON:0001744,5.73e-09,2;UBERON:0000485,8.87e-09,11;UBERON:0004921,1.84e-07,114|phase1_expression=0,0,0,0,0,15.1091344720701,13.783145795136,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.19060606211498,0,0,5.91971964335605,4.5881856213434,0.57423196411502,1.29228598847722,1.939241094173,0,0.756090389279792,3.76941868114018,0,0,0,7.51014211353314,1.49611180822643,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,0.264450566663544,0,0,0,0,0,0,0.949058123089023,0,0.502670417600539,0,0.974820435595601,0.898819408654221,1.08069024937347,3.38540164532424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,1.01659733563424,3.02414954301044,3.97267762427491,2.83871332870031,0.269728692769641,0.991841468704031,2.35580347785627,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0.205421914329655,0.25984164595559,0.358053391334963,0.198681354781265,0.480781798079875,0,0.706765149637033,0.15241361331,0.302478555410522,1.16949456887703,0.769694733122636,0.116876902181569,1.13365191807606,0,0,0,0,0,2.38097111547445,8.57473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0.183843508450014,0,0,0,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421|short_description=p6@Lrmp}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16970 | |||
|HGNC= | |||
|MCL_coexpression_id=331 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F6WLY0,uniprot:Q3TL84 | |||
|association_with_transcript=0bp_to_ENSMUST00000125029,ENSMUST00000132948,uc009era.1_5end | |||
|cluster_id=chr6:145093993..145094003,+ | |||
|description=CAGE_peak_6_at_Lrmp_5end | |||
|id=chr6:145093993..145094003,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,6.01e-12,3;CL:0002563,8.66e-11,9;CL:0002251,8.66e-11,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!4.00e-12!128;UBERON:0001555!4.00e-12!128;UBERON:0007026!4.00e-12!128;UBERON:0004119!9.48e-12!130;UBERON:0000925!9.48e-12!130;UBERON:0006595!9.48e-12!130;UBERON:0005409!5.29e-11!59;UBERON:0004921!1.34e-10!126;UBERON:0004185!1.34e-10!126;UBERON:0000344!1.37e-09!15;UBERON:0001242!3.96e-07!13;UBERON:0000060!3.96e-07!13;UBERON:0001262!3.96e-07!13;UBERON:0004786!3.96e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.52e-20,15;UBERON:0005409,1.90e-15,47;UBERON:0001242,4.62e-14,13;UBERON:0001262,4.62e-14,13;UBERON:0004786,4.62e-14,13;UBERON:0004923,6.03e-12,24;UBERON:0000160,8.49e-11,31;UBERON:0003350,8.66e-11,9;UBERON:0004808,8.66e-11,9;UBERON:0001277,8.66e-11,9;UBERON:0001007,1.32e-09,116;UBERON:0001555,1.32e-09,116;UBERON:0007026,1.32e-09,116;UBERON:0004119,2.21e-09,118;UBERON:0000925,2.21e-09,118;UBERON:0006595,2.21e-09,118;UBERON:0001962,5.73e-09,2;UBERON:0001961,5.73e-09,2;UBERON:0001744,5.73e-09,2;UBERON:0000485,8.87e-09,11;UBERON:0004921,1.84e-07,114 | |||
|phase1_expression=0,0,0,0,0,15.1091344720701,13.783145795136,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.19060606211498,0,0,5.91971964335605,4.5881856213434,0.57423196411502,1.29228598847722,1.939241094173,0,0.756090389279792,3.76941868114018,0,0,0,7.51014211353314,1.49611180822643,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0654846625031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,0.264450566663544,0,0,0,0,0,0,0.949058123089023,0,0.502670417600539,0,0.974820435595601,0.898819408654221,1.08069024937347,3.38540164532424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.874442509889552,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,1.01659733563424,3.02414954301044,3.97267762427491,2.83871332870031,0.269728692769641,0.991841468704031,2.35580347785627,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0.205421914329655,0.25984164595559,0.358053391334963,0.198681354781265,0.480781798079875,0,0.706765149637033,0.15241361331,0.302478555410522,1.16949456887703,0.769694733122636,0.116876902181569,1.13365191807606,0,0,0,0,0,2.38097111547445,8.57473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0.183843508450014,0,0,0,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0.114870937911227,0,0,0,0,0.147198920134397,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p6@Lrmp | |||
}} |
Revision as of 09:49, 5 August 2015
Short description: | p6@Lrmp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Lrmp_5end |
Coexpression cluster: | MCL_coexpression_mm9:331 |
Association with transcript: | 0bp_to_ENSMUST00000125029, ENSMUST00000132948, uc009era.1_5end |
EntrezGene: | 16970 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 6.01e-12 | 3 |
intestinal epithelial cell | 8.66e-11 | 9 |
epithelial cell of alimentary canal | 8.66e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.52e-20 | 15 |
gastrointestinal system | 1.90e-15 | 47 |
intestinal mucosa | 4.62e-14 | 13 |
wall of intestine | 4.62e-14 | 13 |
gastrointestinal system mucosa | 4.62e-14 | 13 |
organ component layer | 6.03e-12 | 24 |
intestine | 8.49e-11 | 31 |
epithelium of mucosa | 8.66e-11 | 9 |
gastrointestinal system epithelium | 8.66e-11 | 9 |
intestinal epithelium | 8.66e-11 | 9 |
digestive system | 1.32e-09 | 116 |
digestive tract | 1.32e-09 | 116 |
primitive gut | 1.32e-09 | 116 |
endoderm-derived structure | 2.21e-09 | 118 |
endoderm | 2.21e-09 | 118 |
presumptive endoderm | 2.21e-09 | 118 |
gut-associated lymphoid tissue | 5.73e-09 | 2 |
mucosa-associated lymphoid tissue | 5.73e-09 | 2 |
lymphoid tissue | 5.73e-09 | 2 |
simple columnar epithelium | 8.87e-09 | 11 |
subdivision of digestive tract | 1.84e-07 | 114 |