FFCP PHASE1:Mm9::chr6:144997230..144997249,-: Difference between revisions
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{{FFCP|EntrezGene=12035|HGNC=|MCL_coexpression_id=20|UniProt=F8WIH8|association_with_transcript=82bp_to_ENSMUST00000087468_5end|description=CAGE_peak_13_at_Bcat1_5end|id=chr6:144997230..144997249,-|ontology_enrichment_celltype=CL:0000117!1.38e-19!23;CL:0000337!1.38e-19!23;CL:0000540!3.77e-16!33;CL:0000047!3.77e-16!33;CL:0000031!3.77e-16!33;CL:0000404!3.77e-16!33;CL:0000221!1.33e-12!44;CL:0000133!1.33e-12!44;CL:0002319!2.05e-12!43;CL:0000393!5.24e-12!39;CL:0000211!5.24e-12!39;CL:0000055!3.62e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.07e-30,23;CL:0000337,3.07e-30,23;CL:0000540,1.92e-19,33;CL:0000047,1.92e-19,33;CL:0000031,1.92e-19,33;CL:0000404,1.92e-19,33;CL:0000393,1.22e-15,39;CL:0000211,1.22e-15,39;CL:0002319,1.06e-13,43;CL:0000221,2.83e-13,44;CL:0000133,2.83e-13,44;CL:0002610,1.60e-07,3;CL:0002614,2.13e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!9.54e-37!71;UBERON:0003075!9.54e-37!71;UBERON:0007284!9.54e-37!71;UBERON:0000033!2.56e-33!63;UBERON:0001017!8.96e-32!73;UBERON:0005743!8.96e-32!73;UBERON:0004121!3.16e-31!102;UBERON:0000924!3.16e-31!102;UBERON:0006601!3.16e-31!102;UBERON:0001049!1.91e-30!52;UBERON:0005068!1.91e-30!52;UBERON:0006241!1.91e-30!52;UBERON:0007135!1.91e-30!52;UBERON:0000073!2.67e-30!75;UBERON:0001016!2.67e-30!75;UBERON:0000955!8.48e-29!50;UBERON:0006238!8.48e-29!50;UBERON:0002616!6.08e-28!49;UBERON:0003056!2.76e-27!49;UBERON:0002020!6.62e-26!34;UBERON:0003080!6.58e-22!40;UBERON:0002791!1.74e-21!29;UBERON:0003528!1.74e-21!29;UBERON:0001893!1.74e-21!29;UBERON:0002780!6.26e-21!39;UBERON:0001890!6.26e-21!39;UBERON:0006240!6.26e-21!39;UBERON:0007811!1.14e-18!86;UBERON:0000153!9.80e-17!94;UBERON:0000956!1.19e-14!21;UBERON:0001869!1.19e-14!21;UBERON:0000203!1.19e-14!21;UBERON:0002619!6.00e-12!17;UBERON:0003076!6.83e-09!12;UBERON:0003057!6.83e-09!12;UBERON:0002021!1.23e-08!10;UBERON:0000411!1.23e-08!10;UBERON:0001950!1.23e-08!10;UBERON:0002420!4.74e-08!8;UBERON:0007245!4.74e-08!8;UBERON:0010009!4.74e-08!8;UBERON:0010011!4.74e-08!8;UBERON:0000454!4.74e-08!8;UBERON:0000025!7.66e-08!114;UBERON:0002298!2.64e-07!6;UBERON:0004111!4.09e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.87e-45,54;UBERON:0001017,7.09e-42,73;UBERON:0001049,4.65e-41,52;UBERON:0005068,4.65e-41,52;UBERON:0006241,4.65e-41,52;UBERON:0007135,4.65e-41,52;UBERON:0001016,1.68e-40,75;UBERON:0002020,3.38e-37,34;UBERON:0002346,1.08e-35,64;UBERON:0003075,1.08e-35,64;UBERON:0007284,1.08e-35,64;UBERON:0004121,2.90e-33,95;UBERON:0000924,2.90e-33,95;UBERON:0006601,2.90e-33,95;UBERON:0000955,1.95e-32,47;UBERON:0006238,1.95e-32,47;UBERON:0002616,6.44e-31,46;UBERON:0010371,3.62e-30,73;UBERON:0003528,1.33e-28,29;UBERON:0002791,1.33e-28,29;UBERON:0001893,1.33e-28,29;UBERON:0003080,4.82e-26,40;UBERON:0002780,2.53e-24,39;UBERON:0001890,2.53e-24,39;UBERON:0006240,2.53e-24,39;UBERON:0003056,1.47e-23,49;UBERON:0010314,2.02e-23,92;UBERON:0002021,2.93e-16,10;UBERON:0000411,2.93e-16,10;UBERON:0001950,2.93e-16,10;UBERON:0000956,8.73e-16,21;UBERON:0001869,8.73e-16,21;UBERON:0000203,8.73e-16,21;UBERON:0003076,1.62e-15,12;UBERON:0003057,1.62e-15,12;UBERON:0002420,4.81e-15,8;UBERON:0007245,4.81e-15,8;UBERON:0010009,4.81e-15,8;UBERON:0010011,4.81e-15,8;UBERON:0000454,4.81e-15,8;UBERON:0000025,6.17e-15,114;UBERON:0004111,2.25e-13,122;UBERON:0002619,9.58e-13,17;UBERON:0002240,6.29e-12,6;UBERON:0005174,6.29e-12,6;UBERON:0001137,6.29e-12,6;UBERON:0001948,5.80e-10,5;UBERON:0002315,5.80e-10,5;UBERON:0011216,1.24e-09,194;UBERON:0002950,2.15e-09,4;UBERON:0001891,2.15e-09,4;UBERON:0009616,2.15e-09,4;UBERON:0010286,2.15e-09,4;UBERON:0000369,2.83e-09,5;UBERON:0002435,2.83e-09,5;UBERON:0000204,2.83e-09,5;UBERON:0010082,2.83e-09,5;UBERON:0000483,4.66e-08,174;UBERON:0000119,7.29e-08,176;UBERON:0004684,1.60e-07,3;UBERON:0002275,1.60e-07,3;UBERON:0002038,2.13e-07,3;UBERON:0009663,2.13e-07,3;UBERON:0009661,2.13e-07,3;UBERON:0000125,2.13e-07,3;UBERON:0002308,2.13e-07,3|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,3.43937983461316,4.23192783417626,5.70448263155561,0,0,0,0,0,0,0,0.829516898467821,1.08004750665353,1.26194976810829,6.85562362569129,4.63823935998388,0.734944795289724,1.15014565221884,0.919218786610021,12.1127469099328,10.0872997087298,8.60196586234964,4.08847491963601,2.92760459527711,3.12548022334056,10.8881369610539,9.00420176050688,6.72312290217964,5.30331453852602,3.55929201997757,2.98239113320481,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.913396434936424,0.461230994512117,0,0.352766121407114,0,0,0,0,0,0,0,0,4.68449275218475,2.09446706813455,0,0,0,0,10.4853447583376,5.49000723382352,1.63350657746724,4.86708096538374,4.85859368927628,7.89594569326328,5.84068547043927,0,0,0.252722758433675,0.631325567659422,0.520481771850815,0.919608417733892,0.720248519221397,0.30140963567143,0.95251098811859,1.0249097622788,0.374806898238915,2.84573707812917,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,1.03562886267751,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,3.78521907415429,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6834966090356,11.6039569726281,0,0,0.315508219416257,0.390438744296638,0,0.238968797952552,0,0,0,0.292255857911312,0,3.53453448063988,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0.177340233642274,0,0.493647061806363,0.608929898229199,0,0,0,0,0,0,0,0,0,10.3838169125885,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0.387479470433193,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0,2.25900737046827,2.76195141904306,1.14579102687879,2.92150409984269,4.11049511862385,2.2661816921691,2.70009000092722,1.80128481289688,4.98456649882625,4.14208249401456,0.518936737920883,0.798049746802062,0.512200817262403,0.243106717068294,0.419226325255965,0.551530525350042,0,0,0,0.252697211763798,0.50695859978048,0,0.280924522409647,0.128050304809739,0.631790158511746,0.476293691283074,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0.476872379894642,0.436039249896986,0.282328141245992,0.25384382367503,0,0,0.271608227691724,1.12228454331548,0.237270036248348,0.492522411877817,0.818462086339379,0.309873682371932,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0|short_description=p13@Bcat1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12035 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8WIH8 | |||
|association_with_transcript=82bp_to_ENSMUST00000087468_5end | |||
|cluster_id=chr6:144997230..144997249,- | |||
|description=CAGE_peak_13_at_Bcat1_5end | |||
|id=chr6:144997230..144997249,- | |||
|ontology_enrichment_celltype=CL:0000117!1.38e-19!23;CL:0000337!1.38e-19!23;CL:0000540!3.77e-16!33;CL:0000047!3.77e-16!33;CL:0000031!3.77e-16!33;CL:0000404!3.77e-16!33;CL:0000221!1.33e-12!44;CL:0000133!1.33e-12!44;CL:0002319!2.05e-12!43;CL:0000393!5.24e-12!39;CL:0000211!5.24e-12!39;CL:0000055!3.62e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.07e-30,23;CL:0000337,3.07e-30,23;CL:0000540,1.92e-19,33;CL:0000047,1.92e-19,33;CL:0000031,1.92e-19,33;CL:0000404,1.92e-19,33;CL:0000393,1.22e-15,39;CL:0000211,1.22e-15,39;CL:0002319,1.06e-13,43;CL:0000221,2.83e-13,44;CL:0000133,2.83e-13,44;CL:0002610,1.60e-07,3;CL:0002614,2.13e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.54e-37!71;UBERON:0003075!9.54e-37!71;UBERON:0007284!9.54e-37!71;UBERON:0000033!2.56e-33!63;UBERON:0001017!8.96e-32!73;UBERON:0005743!8.96e-32!73;UBERON:0004121!3.16e-31!102;UBERON:0000924!3.16e-31!102;UBERON:0006601!3.16e-31!102;UBERON:0001049!1.91e-30!52;UBERON:0005068!1.91e-30!52;UBERON:0006241!1.91e-30!52;UBERON:0007135!1.91e-30!52;UBERON:0000073!2.67e-30!75;UBERON:0001016!2.67e-30!75;UBERON:0000955!8.48e-29!50;UBERON:0006238!8.48e-29!50;UBERON:0002616!6.08e-28!49;UBERON:0003056!2.76e-27!49;UBERON:0002020!6.62e-26!34;UBERON:0003080!6.58e-22!40;UBERON:0002791!1.74e-21!29;UBERON:0003528!1.74e-21!29;UBERON:0001893!1.74e-21!29;UBERON:0002780!6.26e-21!39;UBERON:0001890!6.26e-21!39;UBERON:0006240!6.26e-21!39;UBERON:0007811!1.14e-18!86;UBERON:0000153!9.80e-17!94;UBERON:0000956!1.19e-14!21;UBERON:0001869!1.19e-14!21;UBERON:0000203!1.19e-14!21;UBERON:0002619!6.00e-12!17;UBERON:0003076!6.83e-09!12;UBERON:0003057!6.83e-09!12;UBERON:0002021!1.23e-08!10;UBERON:0000411!1.23e-08!10;UBERON:0001950!1.23e-08!10;UBERON:0002420!4.74e-08!8;UBERON:0007245!4.74e-08!8;UBERON:0010009!4.74e-08!8;UBERON:0010011!4.74e-08!8;UBERON:0000454!4.74e-08!8;UBERON:0000025!7.66e-08!114;UBERON:0002298!2.64e-07!6;UBERON:0004111!4.09e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.87e-45,54;UBERON:0001017,7.09e-42,73;UBERON:0001049,4.65e-41,52;UBERON:0005068,4.65e-41,52;UBERON:0006241,4.65e-41,52;UBERON:0007135,4.65e-41,52;UBERON:0001016,1.68e-40,75;UBERON:0002020,3.38e-37,34;UBERON:0002346,1.08e-35,64;UBERON:0003075,1.08e-35,64;UBERON:0007284,1.08e-35,64;UBERON:0004121,2.90e-33,95;UBERON:0000924,2.90e-33,95;UBERON:0006601,2.90e-33,95;UBERON:0000955,1.95e-32,47;UBERON:0006238,1.95e-32,47;UBERON:0002616,6.44e-31,46;UBERON:0010371,3.62e-30,73;UBERON:0003528,1.33e-28,29;UBERON:0002791,1.33e-28,29;UBERON:0001893,1.33e-28,29;UBERON:0003080,4.82e-26,40;UBERON:0002780,2.53e-24,39;UBERON:0001890,2.53e-24,39;UBERON:0006240,2.53e-24,39;UBERON:0003056,1.47e-23,49;UBERON:0010314,2.02e-23,92;UBERON:0002021,2.93e-16,10;UBERON:0000411,2.93e-16,10;UBERON:0001950,2.93e-16,10;UBERON:0000956,8.73e-16,21;UBERON:0001869,8.73e-16,21;UBERON:0000203,8.73e-16,21;UBERON:0003076,1.62e-15,12;UBERON:0003057,1.62e-15,12;UBERON:0002420,4.81e-15,8;UBERON:0007245,4.81e-15,8;UBERON:0010009,4.81e-15,8;UBERON:0010011,4.81e-15,8;UBERON:0000454,4.81e-15,8;UBERON:0000025,6.17e-15,114;UBERON:0004111,2.25e-13,122;UBERON:0002619,9.58e-13,17;UBERON:0002240,6.29e-12,6;UBERON:0005174,6.29e-12,6;UBERON:0001137,6.29e-12,6;UBERON:0001948,5.80e-10,5;UBERON:0002315,5.80e-10,5;UBERON:0011216,1.24e-09,194;UBERON:0002950,2.15e-09,4;UBERON:0001891,2.15e-09,4;UBERON:0009616,2.15e-09,4;UBERON:0010286,2.15e-09,4;UBERON:0000369,2.83e-09,5;UBERON:0002435,2.83e-09,5;UBERON:0000204,2.83e-09,5;UBERON:0010082,2.83e-09,5;UBERON:0000483,4.66e-08,174;UBERON:0000119,7.29e-08,176;UBERON:0004684,1.60e-07,3;UBERON:0002275,1.60e-07,3;UBERON:0002038,2.13e-07,3;UBERON:0009663,2.13e-07,3;UBERON:0009661,2.13e-07,3;UBERON:0000125,2.13e-07,3;UBERON:0002308,2.13e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.439372365468944,0.194429899074283,0,0,0,0,0,0,0,0,3.43937983461316,4.23192783417626,5.70448263155561,0,0,0,0,0,0,0,0.829516898467821,1.08004750665353,1.26194976810829,6.85562362569129,4.63823935998388,0.734944795289724,1.15014565221884,0.919218786610021,12.1127469099328,10.0872997087298,8.60196586234964,4.08847491963601,2.92760459527711,3.12548022334056,10.8881369610539,9.00420176050688,6.72312290217964,5.30331453852602,3.55929201997757,2.98239113320481,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.148442139064825,0.173485326766136,0.913396434936424,0.461230994512117,0,0.352766121407114,0,0,0,0,0,0,0,0,4.68449275218475,2.09446706813455,0,0,0,0,10.4853447583376,5.49000723382352,1.63350657746724,4.86708096538374,4.85859368927628,7.89594569326328,5.84068547043927,0,0,0.252722758433675,0.631325567659422,0.520481771850815,0.919608417733892,0.720248519221397,0.30140963567143,0.95251098811859,1.0249097622788,0.374806898238915,2.84573707812917,0,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,1.03562886267751,0,0,0,0.196764231747404,0.154267112887378,0,0,0,0,0.164167464079095,0,0,0,0,3.78521907415429,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6834966090356,11.6039569726281,0,0,0.315508219416257,0.390438744296638,0,0.238968797952552,0,0,0,0.292255857911312,0,3.53453448063988,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0.177340233642274,0,0.493647061806363,0.608929898229199,0,0,0,0,0,0,0,0,0,10.3838169125885,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0.387479470433193,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0,2.25900737046827,2.76195141904306,1.14579102687879,2.92150409984269,4.11049511862385,2.2661816921691,2.70009000092722,1.80128481289688,4.98456649882625,4.14208249401456,0.518936737920883,0.798049746802062,0.512200817262403,0.243106717068294,0.419226325255965,0.551530525350042,0,0,0,0.252697211763798,0.50695859978048,0,0.280924522409647,0.128050304809739,0.631790158511746,0.476293691283074,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0.476872379894642,0.436039249896986,0.282328141245992,0.25384382367503,0,0,0.271608227691724,1.12228454331548,0.237270036248348,0.492522411877817,0.818462086339379,0.309873682371932,0,0.249810577937946,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p13@Bcat1 | |||
}} |
Revision as of 09:43, 5 August 2015
Short description: | p13@Bcat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Bcat1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 82bp_to_ENSMUST00000087468_5end |
EntrezGene: | 12035 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.07e-30 | 23 |
neuroblast (sensu Vertebrata) | 3.07e-30 | 23 |
neuron | 1.92e-19 | 33 |
neuronal stem cell | 1.92e-19 | 33 |
neuroblast | 1.92e-19 | 33 |
electrically signaling cell | 1.92e-19 | 33 |
electrically responsive cell | 1.22e-15 | 39 |
electrically active cell | 1.22e-15 | 39 |
neural cell | 1.06e-13 | 43 |
ectodermal cell | 2.83e-13 | 44 |
neurectodermal cell | 2.83e-13 | 44 |
raphe nuclei neuron | 1.60e-07 | 3 |
neuron of the substantia nigra | 2.13e-07 | 3 |