FFCP PHASE1:Mm9::chr15:60018890..60018895,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:60018890..60018895,-
|short_description=p8@uc007vxz.1
|description=CAGE_peak_8_at_uc007vxz.1_5end
|association_with_transcript=67bp_to_uc007vxz.1_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=67bp_to_uc007vxz.1_5end | |||
|cluster_id=chr15:60018890..60018895,- | |||
|description=CAGE_peak_8_at_uc007vxz.1_5end | |||
|id=chr15:60018890..60018895,- | |||
|ontology_enrichment_celltype=CL:0000791!2.89e-28!9;CL:0000789!2.89e-28!9;CL:0002420!2.89e-28!9;CL:0002419!2.89e-28!9;CL:0000790!2.89e-28!9;CL:0000624!1.40e-24!8;CL:0000893!2.97e-24!6;CL:0002489!2.97e-24!6;CL:0000898!2.97e-24!6;CL:0000809!2.97e-24!6;CL:0000810!2.97e-24!6;CL:0000895!2.97e-24!6;CL:0000808!2.97e-24!6;CL:0000894!2.97e-24!6;CL:0000806!2.97e-24!6;CL:0000807!2.97e-24!6;CL:0000805!2.97e-24!6;CL:0002425!2.97e-24!6;CL:0002436!2.97e-24!6;CL:0002427!2.97e-24!6;CL:0002428!2.97e-24!6;CL:0002429!2.97e-24!6;CL:0002433!2.97e-24!6;CL:0002431!2.97e-24!6;CL:0002432!2.97e-24!6;CL:0000084!6.27e-23!11;CL:0000827!6.27e-23!11;CL:0000838!6.31e-21!12;CL:0000542!3.13e-19!13;CL:0000051!3.13e-19!13;CL:0002031!1.15e-17!25;CL:0000738!1.94e-14!17;CL:0002087!1.94e-14!17;CL:0000988!2.20e-13!32;CL:0002032!2.20e-13!32;CL:0000037!2.20e-13!32;CL:0000566!2.20e-13!32;CL:0000837!2.20e-13!32;CL:0002320!9.95e-09!46;CL:0000134!9.95e-09!46;CL:0000219!3.74e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.04e-39,8;CL:0000791,5.98e-35,9;CL:0000789,5.98e-35,9;CL:0002420,5.98e-35,9;CL:0002419,5.98e-35,9;CL:0000790,5.98e-35,9;CL:0000893,1.12e-33,6;CL:0002489,1.12e-33,6;CL:0000898,1.12e-33,6;CL:0000809,1.12e-33,6;CL:0000810,1.12e-33,6;CL:0000895,1.12e-33,6;CL:0000808,1.12e-33,6;CL:0000894,1.12e-33,6;CL:0000806,1.12e-33,6;CL:0000807,1.12e-33,6;CL:0000805,1.12e-33,6;CL:0002425,1.12e-33,6;CL:0002436,1.12e-33,6;CL:0002427,1.12e-33,6;CL:0002428,1.12e-33,6;CL:0002429,1.12e-33,6;CL:0002433,1.12e-33,6;CL:0002431,1.12e-33,6;CL:0002432,1.12e-33,6;CL:0000084,1.07e-28,11;CL:0000827,1.07e-28,11;CL:0000838,2.38e-26,12;CL:0000542,2.32e-24,13;CL:0000051,2.32e-24,13;CL:0000738,9.72e-19,17;CL:0002087,9.72e-19,17;CL:0000815,6.50e-14,1;CL:0000792,6.50e-14,1;CL:0002031,7.24e-13,25;CL:0000988,4.03e-10,32;CL:0002032,4.03e-10,32;CL:0000037,4.03e-10,32;CL:0000837,4.03e-10,32;CL:0002320,4.10e-07,46;CL:0000134,4.10e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!7.45e-19!23;UBERON:0000974!7.45e-19!23;UBERON:0004807!7.45e-19!23;UBERON:0005058!7.45e-19!23;UBERON:0003351!7.45e-19!23;UBERON:0009113!7.45e-19!23;UBERON:0003295!7.45e-19!23;UBERON:0009722!7.45e-19!23;UBERON:0005562!7.45e-19!23;UBERON:0007690!7.45e-19!23;UBERON:0002193!4.29e-18!48;UBERON:0006562!5.43e-18!24;UBERON:0003408!5.43e-18!24;UBERON:0001557!5.43e-18!24;UBERON:0001042!5.43e-18!24;UBERON:0008814!5.43e-18!24;UBERON:0009145!5.43e-18!24;UBERON:0004177!1.87e-17!29;UBERON:0002390!7.16e-17!45;UBERON:0003061!7.16e-17!45;UBERON:0000072!8.72e-16!27;UBERON:0002405!4.04e-15!70;UBERON:0005057!1.11e-12!51;UBERON:0000063!9.49e-12!35;UBERON:0000065!1.15e-11!41;UBERON:0001004!2.45e-11!42;UBERON:0003929!7.74e-10!55;UBERON:0002368!8.01e-09!60;UBERON:0002384!9.95e-09!46;UBERON:0005911!1.15e-08!69;UBERON:0003081!1.50e-08!88;UBERON:0002530!5.78e-08!65;UBERON:0000490!8.28e-08!66;UBERON:0000949!5.79e-07!72;UBERON:0001041!6.44e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.55e-13,1;UBERON:0001097,1.55e-13,1;UBERON:0003968,1.55e-13,1;UBERON:0001467,1.55e-13,1;UBERON:0002370,3.41e-09,23;UBERON:0000974,3.41e-09,23;UBERON:0004807,3.41e-09,23;UBERON:0005058,3.41e-09,23;UBERON:0003351,3.41e-09,23;UBERON:0009113,3.41e-09,23;UBERON:0003295,3.41e-09,23;UBERON:0009722,3.41e-09,23;UBERON:0005562,3.41e-09,23;UBERON:0007690,3.41e-09,23;UBERON:0006562,7.89e-09,24;UBERON:0003408,7.89e-09,24;UBERON:0001557,7.89e-09,24;UBERON:0001042,7.89e-09,24;UBERON:0008814,7.89e-09,24;UBERON:0009145,7.89e-09,24;UBERON:0000072,6.80e-08,27;UBERON:0004177,2.24e-07,29;UBERON:0005057,2.24e-07,29;UBERON:0002384,4.10e-07,46;UBERON:0002193,8.70e-07,48;UBERON:0002405,8.70e-07,48 | |||
|phase1_expression=0,0,0,0,0,0,0,2.84071311571468,4.50523910885334,3.04283884218592,0.68487187290202,0.159544317990673,1.02720437958723,1.39872643870396,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27338845544205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0.201652370273681,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,2.84071311571468,4.50523910885334,3.04283884218592,0.68487187290202,0.159544317990673,1.02720437958723,1.39872643870396,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.29468941823586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27338845544205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0,0.201652370273681,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@uc007vxz.1 | |||
}} | }} |
Latest revision as of 08:28, 5 August 2015
Short description: | p8@uc007vxz.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_uc007vxz.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 67bp_to_uc007vxz.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymph node | 1.55e-13 | 1 |
axillary lymph node | 1.55e-13 | 1 |
peripheral lymph node | 1.55e-13 | 1 |
shoulder | 1.55e-13 | 1 |
thymus | 3.41e-09 | 23 |
neck | 3.41e-09 | 23 |
respiratory system epithelium | 3.41e-09 | 23 |
hemolymphoid system gland | 3.41e-09 | 23 |
pharyngeal epithelium | 3.41e-09 | 23 |
thymic region | 3.41e-09 | 23 |
pharyngeal gland | 3.41e-09 | 23 |
entire pharyngeal arch endoderm | 3.41e-09 | 23 |
thymus primordium | 3.41e-09 | 23 |
early pharyngeal endoderm | 3.41e-09 | 23 |
pharynx | 7.89e-09 | 24 |
gland of gut | 7.89e-09 | 24 |
upper respiratory tract | 7.89e-09 | 24 |
chordate pharynx | 7.89e-09 | 24 |
pharyngeal arch system | 7.89e-09 | 24 |
pharyngeal region of foregut | 7.89e-09 | 24 |
segment of respiratory tract | 6.80e-08 | 27 |
hemopoietic organ | 2.24e-07 | 29 |
immune organ | 2.24e-07 | 29 |
connective tissue | 4.10e-07 | 46 |
hemolymphoid system | 8.70e-07 | 48 |
immune system | 8.70e-07 | 48 |