FFCP PHASE1:Mm9::chr17:71965559..71965599,+: Difference between revisions
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{{FFCP|EntrezGene=72515|HGNC=|MCL_coexpression_id=101|UniProt=Q6ZQL4|association_with_transcript=4bp_to_ENSMUST00000047086,NM_175639_5end|description=CAGE_peak_1_at_Wdr43_5end|id=chr17:71965559..71965599,+|ontology_enrichment_celltype=CL:0000988!1.38e-11!32;CL:0002032!1.38e-11!32;CL:0000037!1.38e-11!32;CL:0000566!1.38e-11!32;CL:0000837!1.38e-11!32;CL:0000838!1.53e-08!12;CL:0000542!2.21e-08!13;CL:0000051!2.21e-08!13;CL:0002031!3.55e-08!25;CL:0000084!5.86e-08!11;CL:0000827!5.86e-08!11;CL:0000791!3.64e-07!9;CL:0000789!3.64e-07!9;CL:0002420!3.64e-07!9;CL:0002419!3.64e-07!9;CL:0000790!3.64e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,1.38e-11,32;CL:0002032,1.38e-11,32;CL:0000037,1.38e-11,32;CL:0000837,1.38e-11,32;CL:0000838,1.53e-08,12;CL:0000542,2.21e-08,13;CL:0000051,2.21e-08,13;CL:0002031,3.55e-08,25;CL:0000084,5.86e-08,11;CL:0000827,5.86e-08,11;CL:0000791,3.64e-07,9;CL:0000789,3.64e-07,9;CL:0002420,3.64e-07,9;CL:0002419,3.64e-07,9;CL:0000790,3.64e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.29e-09!29;UBERON:0000072!4.71e-09!27;UBERON:0002370!2.44e-08!23;UBERON:0000974!2.44e-08!23;UBERON:0004807!2.44e-08!23;UBERON:0005058!2.44e-08!23;UBERON:0003351!2.44e-08!23;UBERON:0009113!2.44e-08!23;UBERON:0003295!2.44e-08!23;UBERON:0009722!2.44e-08!23;UBERON:0005562!2.44e-08!23;UBERON:0007690!2.44e-08!23;UBERON:0006562!3.06e-08!24;UBERON:0001557!3.06e-08!24;UBERON:0001042!3.06e-08!24;UBERON:0008814!3.06e-08!24;UBERON:0009145!3.06e-08!24;UBERON:0003408!5.76e-08!24;UBERON:0002390!7.01e-08!45;UBERON:0003061!7.01e-08!45;UBERON:0001041!9.67e-08!92;UBERON:0005057!1.40e-07!51;UBERON:0002193!1.97e-07!48;UBERON:0000077!2.74e-07!97;UBERON:0002405!6.25e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.29e-09,29;UBERON:0005057,2.29e-09,29;UBERON:0000072,4.71e-09,27;UBERON:0002370,2.44e-08,23;UBERON:0000974,2.44e-08,23;UBERON:0004807,2.44e-08,23;UBERON:0005058,2.44e-08,23;UBERON:0003351,2.44e-08,23;UBERON:0009113,2.44e-08,23;UBERON:0003295,2.44e-08,23;UBERON:0009722,2.44e-08,23;UBERON:0005562,2.44e-08,23;UBERON:0007690,2.44e-08,23;UBERON:0006562,3.06e-08,24;UBERON:0001557,3.06e-08,24;UBERON:0001042,3.06e-08,24;UBERON:0008814,3.06e-08,24;UBERON:0009145,3.06e-08,24;UBERON:0000077,4.94e-08,35;UBERON:0003408,5.76e-08,24;UBERON:0002390,7.01e-08,45;UBERON:0003061,7.01e-08,45;UBERON:0002193,1.97e-07,48;UBERON:0002405,1.97e-07,48;UBERON:0000153,5.46e-07,43|phase1_expression=39.7169140819889,7.32848356042658,8.64498554840118,8.46899791659124,7.51343594919521,46.3346790476816,50.226717728038,83.9301602370246,429.827968729039,484.279504960205,323.944395882655,338.154181981231,108.198861316522,101.320246403618,81.2787818830217,67.6267393082019,37.0767795407918,91.1685657885307,102.561596337093,78.9364752344336,21.941168858976,68.6100472798117,76.2703384285691,34.0783860549956,27.7585230091276,20.0981187440257,26.2764817657036,23.9173068281337,24.893067948785,26.2111334950328,31.7074630237086,128.911226712305,91.0295885625164,63.3926724061755,79.4341954316005,77.1328754463404,80.2385570111111,12.1374172913703,15.626706890476,17.7998072951091,7.05877785637217,7.5135003345429,11.1667381197165,43.6861958375253,45.8223729112206,51.5766373574325,10.9534788208725,11.3373081317832,5.71184075109627,15.3599620268684,10.7789544651529,7.18762821824858,95.3005202407943,97.9238891715315,111.583141315298,37.3026182252123,31.2321449533245,23.7209162447623,22.659443616275,17.4567023159771,16.4796164911607,14.5703148789727,6.22506357277798,8.54904731417329,9.88866362566974,9.9467216092454,6.89080254192331,7.68436610643109,31.4179525294687,22.0059679480656,30.0764694732476,13.139945282575,15.9025349485162,30.1327366068787,23.0029130443767,34.0110951045708,22.0231761998777,29.4957750976784,28.1099955858926,23.7395317914349,21.5910838901687,27.0874952689515,18.7052609330925,20.2594539611405,28.2676758387099,32.7037729875771,34.0268317109856,32.4335035736023,79.2095982265105,42.0933589794795,53.3350659211087,30.1148356943485,89.7562160494231,24.8263468153396,35.7377029596218,58.2434953226536,33.1448831510934,34.4269251607677,27.0177444786984,25.7937889392548,37.8868799199271,34.6481489018658,50.9610479413291,35.5533351576666,55.8546885808932,62.3265269068743,66.2237022969366,38.023231946447,114.709482455697,39.782493269373,54.4743926045667,48.7144765299426,37.1290950582254,31.1995865943929,42.8022893973965,31.7936476064079,32.382540773203,43.5244064328934,37.1536431818947,52.2506925330132,46.8184019136034,51.3967768323335,33.550517019262,34.255353250351,33.9303665037797,33.7203312875341,112.865847284577,92.9849233039782,91.6176337196796,28.1606402081067,33.8550446085784,46.6177646338727,29.3763101124947,29.9187085076487,24.3112012134685,33.0972176658226,53.5675053852664,41.427521213161,38.9193047987859,37.4586503477924,53.3493816147085,48.9691482443297,49.8772099560817,43.4029875366859,49.9387903770746,43.6867786171338,43.0090915729155,36.9945820156792,53.8919982332106,63.5396429363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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:72515 | |||
|HGNC= | |||
|MCL_coexpression_id=101 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q6ZQL4 | |||
|association_with_transcript=4bp_to_ENSMUST00000047086,NM_175639_5end | |||
|cluster_id=chr17:71965559..71965599,+ | |||
|description=CAGE_peak_1_at_Wdr43_5end | |||
|id=chr17:71965559..71965599,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.38e-11!32;CL:0002032!1.38e-11!32;CL:0000037!1.38e-11!32;CL:0000566!1.38e-11!32;CL:0000837!1.38e-11!32;CL:0000838!1.53e-08!12;CL:0000542!2.21e-08!13;CL:0000051!2.21e-08!13;CL:0002031!3.55e-08!25;CL:0000084!5.86e-08!11;CL:0000827!5.86e-08!11;CL:0000791!3.64e-07!9;CL:0000789!3.64e-07!9;CL:0002420!3.64e-07!9;CL:0002419!3.64e-07!9;CL:0000790!3.64e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.38e-11,32;CL:0002032,1.38e-11,32;CL:0000037,1.38e-11,32;CL:0000837,1.38e-11,32;CL:0000838,1.53e-08,12;CL:0000542,2.21e-08,13;CL:0000051,2.21e-08,13;CL:0002031,3.55e-08,25;CL:0000084,5.86e-08,11;CL:0000827,5.86e-08,11;CL:0000791,3.64e-07,9;CL:0000789,3.64e-07,9;CL:0002420,3.64e-07,9;CL:0002419,3.64e-07,9;CL:0000790,3.64e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.29e-09!29;UBERON:0000072!4.71e-09!27;UBERON:0002370!2.44e-08!23;UBERON:0000974!2.44e-08!23;UBERON:0004807!2.44e-08!23;UBERON:0005058!2.44e-08!23;UBERON:0003351!2.44e-08!23;UBERON:0009113!2.44e-08!23;UBERON:0003295!2.44e-08!23;UBERON:0009722!2.44e-08!23;UBERON:0005562!2.44e-08!23;UBERON:0007690!2.44e-08!23;UBERON:0006562!3.06e-08!24;UBERON:0001557!3.06e-08!24;UBERON:0001042!3.06e-08!24;UBERON:0008814!3.06e-08!24;UBERON:0009145!3.06e-08!24;UBERON:0003408!5.76e-08!24;UBERON:0002390!7.01e-08!45;UBERON:0003061!7.01e-08!45;UBERON:0001041!9.67e-08!92;UBERON:0005057!1.40e-07!51;UBERON:0002193!1.97e-07!48;UBERON:0000077!2.74e-07!97;UBERON:0002405!6.25e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.29e-09,29;UBERON:0005057,2.29e-09,29;UBERON:0000072,4.71e-09,27;UBERON:0002370,2.44e-08,23;UBERON:0000974,2.44e-08,23;UBERON:0004807,2.44e-08,23;UBERON:0005058,2.44e-08,23;UBERON:0003351,2.44e-08,23;UBERON:0009113,2.44e-08,23;UBERON:0003295,2.44e-08,23;UBERON:0009722,2.44e-08,23;UBERON:0005562,2.44e-08,23;UBERON:0007690,2.44e-08,23;UBERON:0006562,3.06e-08,24;UBERON:0001557,3.06e-08,24;UBERON:0001042,3.06e-08,24;UBERON:0008814,3.06e-08,24;UBERON:0009145,3.06e-08,24;UBERON:0000077,4.94e-08,35;UBERON:0003408,5.76e-08,24;UBERON:0002390,7.01e-08,45;UBERON:0003061,7.01e-08,45;UBERON:0002193,1.97e-07,48;UBERON:0002405,1.97e-07,48;UBERON:0000153,5.46e-07,43 | |||
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| |||
|short_description=p1@Wdr43 | |||
}} |
Revision as of 07:35, 5 August 2015
Short description: | p1@Wdr43 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Wdr43_5end |
Coexpression cluster: | MCL_coexpression_mm9:101 |
Association with transcript: | 4bp_to_ENSMUST00000047086, NM_175639_5end |
EntrezGene: | 72515 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.38e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.38e-11 | 32 |
hematopoietic stem cell | 1.38e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.38e-11 | 32 |
lymphoid lineage restricted progenitor cell | 1.53e-08 | 12 |
lymphocyte | 2.21e-08 | 13 |
common lymphoid progenitor | 2.21e-08 | 13 |
hematopoietic lineage restricted progenitor cell | 3.55e-08 | 25 |
T cell | 5.86e-08 | 11 |
pro-T cell | 5.86e-08 | 11 |
mature alpha-beta T cell | 3.64e-07 | 9 |
alpha-beta T cell | 3.64e-07 | 9 |
immature T cell | 3.64e-07 | 9 |
mature T cell | 3.64e-07 | 9 |
immature alpha-beta T cell | 3.64e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.29e-09 | 29 |
immune organ | 2.29e-09 | 29 |
segment of respiratory tract | 4.71e-09 | 27 |
thymus | 2.44e-08 | 23 |
neck | 2.44e-08 | 23 |
respiratory system epithelium | 2.44e-08 | 23 |
hemolymphoid system gland | 2.44e-08 | 23 |
pharyngeal epithelium | 2.44e-08 | 23 |
thymic region | 2.44e-08 | 23 |
pharyngeal gland | 2.44e-08 | 23 |
entire pharyngeal arch endoderm | 2.44e-08 | 23 |
thymus primordium | 2.44e-08 | 23 |
early pharyngeal endoderm | 2.44e-08 | 23 |
pharynx | 3.06e-08 | 24 |
upper respiratory tract | 3.06e-08 | 24 |
chordate pharynx | 3.06e-08 | 24 |
pharyngeal arch system | 3.06e-08 | 24 |
pharyngeal region of foregut | 3.06e-08 | 24 |
mixed endoderm/mesoderm-derived structure | 4.94e-08 | 35 |
gland of gut | 5.76e-08 | 24 |
hematopoietic system | 7.01e-08 | 45 |
blood island | 7.01e-08 | 45 |
hemolymphoid system | 1.97e-07 | 48 |
immune system | 1.97e-07 | 48 |
anterior region of body | 5.46e-07 | 43 |