FFCP PHASE1:Mm9::chr11:104182657..104182673,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:104182657..104182673,+ to FFCP PHASE1:Mm9::chr11:104182657..104182673,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1941 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:104182657..104182673,+ | |||
|description=CAGE_peak_at_chr11:104182657..104182673,+ | |||
|id=chr11:104182657..104182673,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.24e-30!23;CL:0000337!1.24e-30!23;CL:0000540!2.42e-19!33;CL:0000047!2.42e-19!33;CL:0000031!2.42e-19!33;CL:0000404!2.42e-19!33;CL:0000393!2.23e-15!39;CL:0000211!2.23e-15!39;CL:0002319!1.31e-14!43;CL:0000221!3.95e-14!44;CL:0000133!3.95e-14!44;CL:0000055!1.15e-11!50;CL:0002609!4.00e-10!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.16e-54,23;CL:0000337,5.16e-54,23;CL:0000540,6.49e-37,33;CL:0000047,6.49e-37,33;CL:0000031,6.49e-37,33;CL:0000404,6.49e-37,33;CL:0000393,7.46e-31,39;CL:0000211,7.46e-31,39;CL:0002319,9.47e-28,43;CL:0000221,4.62e-27,44;CL:0000133,4.62e-27,44;CL:0002321,4.79e-16,70;CL:0002612,8.53e-15,3;CL:0002610,1.17e-14,3;CL:0000120,2.97e-14,3;CL:0002613,6.07e-14,3;CL:0000723,1.01e-11,91;CL:0000048,1.01e-11,91;CL:0000034,7.96e-11,97;CL:0002609,4.13e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!7.30e-22!34;UBERON:0000073!4.84e-18!75;UBERON:0001016!4.84e-18!75;UBERON:0001017!1.21e-17!73;UBERON:0005743!1.21e-17!73;UBERON:0001049!5.33e-17!52;UBERON:0005068!5.33e-17!52;UBERON:0006241!5.33e-17!52;UBERON:0007135!5.33e-17!52;UBERON:0002616!2.43e-15!49;UBERON:0002791!4.02e-15!29;UBERON:0003528!4.02e-15!29;UBERON:0001893!4.02e-15!29;UBERON:0000955!6.85e-15!50;UBERON:0006238!6.85e-15!50;UBERON:0003080!2.79e-13!40;UBERON:0004121!1.75e-12!102;UBERON:0000924!1.75e-12!102;UBERON:0006601!1.75e-12!102;UBERON:0000033!2.08e-12!63;UBERON:0002346!2.32e-12!71;UBERON:0003075!2.32e-12!71;UBERON:0007284!2.32e-12!71;UBERON:0002780!2.35e-12!39;UBERON:0001890!2.35e-12!39;UBERON:0006240!2.35e-12!39;UBERON:0003056!5.58e-12!49;UBERON:0000956!5.61e-11!21;UBERON:0001869!5.61e-11!21;UBERON:0000203!5.61e-11!21;UBERON:0001948!3.33e-09!5;UBERON:0002315!3.33e-09!5;UBERON:0002619!4.06e-08!17;UBERON:0002240!1.48e-07!6;UBERON:0005174!1.48e-07!6;UBERON:0001137!1.48e-07!6;UBERON:0007811!3.50e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.95e-23,34;UBERON:0001017,7.48e-22,73;UBERON:0000073,2.45e-21,54;UBERON:0001016,3.38e-21,75;UBERON:0004121,3.75e-16,95;UBERON:0000924,3.75e-16,95;UBERON:0006601,3.75e-16,95;UBERON:0001948,6.57e-15,5;UBERON:0002315,6.57e-15,5;UBERON:0002257,8.53e-15,3;UBERON:0004684,1.17e-14,3;UBERON:0002275,1.17e-14,3;UBERON:0001049,1.95e-14,52;UBERON:0005068,1.95e-14,52;UBERON:0006241,1.95e-14,52;UBERON:0007135,1.95e-14,52;UBERON:0003528,1.43e-13,29;UBERON:0002791,1.43e-13,29;UBERON:0001893,1.43e-13,29;UBERON:0002240,1.87e-12,6;UBERON:0005174,1.87e-12,6;UBERON:0001137,1.87e-12,6;UBERON:0002346,2.66e-11,64;UBERON:0003075,2.66e-11,64;UBERON:0007284,2.66e-11,64;UBERON:0002780,1.03e-09,39;UBERON:0001890,1.03e-09,39;UBERON:0006240,1.03e-09,39;UBERON:0010371,1.27e-09,73;UBERON:0003080,1.96e-09,40;UBERON:0002420,4.94e-09,8;UBERON:0007245,4.94e-09,8;UBERON:0010009,4.94e-09,8;UBERON:0010011,4.94e-09,8;UBERON:0000454,4.94e-09,8;UBERON:0000369,1.43e-08,5;UBERON:0002435,1.43e-08,5;UBERON:0000204,1.43e-08,5;UBERON:0010082,1.43e-08,5;UBERON:0002616,5.23e-08,46;UBERON:0000955,8.33e-08,47;UBERON:0006238,8.33e-08,47;UBERON:0003056,2.00e-07,49;UBERON:0010314,3.74e-07,92;UBERON:0000956,5.22e-07,21;UBERON:0001869,5.22e-07,21;UBERON:0000203,5.22e-07,21 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,5.81890077199236,3.80298842103708,0,0,0,0,0,0,0,1.76272340924412,3.37514845829227,0.420649922702764,1.14260393761521,0.441737081903227,1.10241719293459,0.958454710182364,0.919218786610021,4.40463523997555,2.93680877595932,4.6081959976873,1.31886287730194,3.47653045689157,2.08365348222704,1.3959149950069,0,0,5.00868595305235,4.9830088279686,2.42319279572891,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0.753926112677186,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0.2562274405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,1.54356918568927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,1.14579102687879,0.515559547031063,0,1.5107877947794,0.675022500231806,0,0.906284817968409,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.187283014939765,0,0,0,0,0,0.412085900803307,0.294397840268795,0.685738504770831,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0.197008964751127,0,0,0,0.249810577937946,0.467863216890817,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,5.81890077199236,3.80298842103708,0,0,0,0,0,0,0,1.76272340924412,3.37514845829227,0.420649922702764,1.14260393761521,0.441737081903227,1.10241719293459,0.958454710182364,0.919218786610021,4.40463523997555,2.93680877595932,4.6081959976873,1.31886287730194,3.47653045689157,2.08365348222704,1.3959149950069,0,0,5.00868595305235,4.9830088279686,2.42319279572891,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0.753926112677186,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0.2562274405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,1.54356918568927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,1.14579102687879,0.515559547031063,0,1.5107877947794,0.675022500231806,0,0.906284817968409,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.187283014939765,0,0,0,0,0,0.412085900803307,0.294397840268795,0.685738504770831,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.355905054372522,0.197008964751127,0,0,0,0.249810577937946,0.467863216890817,0,0,0,0 | ||
|short_description=p@chr11:104182657..104182673,+ | |||
}} | }} |
Latest revision as of 06:47, 5 August 2015
Short description: | p@chr11:104182657..104182673, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:104182657..104182673, + |
Coexpression cluster: | MCL_coexpression_mm9:1941 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.16e-54 | 23 |
neuroblast (sensu Vertebrata) | 5.16e-54 | 23 |
neuron | 6.49e-37 | 33 |
neuronal stem cell | 6.49e-37 | 33 |
neuroblast | 6.49e-37 | 33 |
electrically signaling cell | 6.49e-37 | 33 |
electrically responsive cell | 7.46e-31 | 39 |
electrically active cell | 7.46e-31 | 39 |
neural cell | 9.47e-28 | 43 |
ectodermal cell | 4.62e-27 | 44 |
neurectodermal cell | 4.62e-27 | 44 |
embryonic cell | 4.79e-16 | 70 |
neuron of the ventral spinal cord | 8.53e-15 | 3 |
raphe nuclei neuron | 1.17e-14 | 3 |
granule cell | 2.97e-14 | 3 |
striatum neuron | 6.07e-14 | 3 |
somatic stem cell | 1.01e-11 | 91 |
multi fate stem cell | 1.01e-11 | 91 |
stem cell | 7.96e-11 | 97 |
neuron of cerebral cortex | 4.13e-07 | 6 |