FFCP PHASE1:Mm9::chr9:46051114..46051123,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:46051114..46051123,+
|short_description=p@chr9:46051114..46051123,+
|description=CAGE_peak_at_chr9:46051114..46051123,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=191 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:46051114..46051123,+ | |||
|description=CAGE_peak_at_chr9:46051114..46051123,+ | |||
|id=chr9:46051114..46051123,+ | |||
|ontology_enrichment_celltype=CL:0000239!2.25e-12!6;CL:0000677!2.25e-12!6;CL:0000212!2.25e-12!6;CL:0000584!2.25e-12!6;CL:0000075!1.77e-10!7;CL:0002563!5.95e-08!9;CL:0002251!5.95e-08!9;CL:0000473!1.38e-07!3;CL:0000627!1.38e-07!3;CL:0000682!1.38e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.53e-19,6;CL:0000677,5.53e-19,6;CL:0000584,5.53e-19,6;CL:0000075,3.40e-16,7;CL:0002563,1.80e-12,9;CL:0002251,1.80e-12,9;CL:0000066,1.31e-11,25;CL:0000682,2.85e-11,3;CL:0002076,3.04e-07,15;CL:0000223,4.05e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.06e-23!43;UBERON:0000344!6.42e-18!15;UBERON:0005409!1.81e-15!59;UBERON:0001242!4.50e-14!13;UBERON:0000060!4.50e-14!13;UBERON:0001262!4.50e-14!13;UBERON:0004786!4.50e-14!13;UBERON:0004923!6.92e-12!24;UBERON:0003350!5.95e-08!9;UBERON:0004808!5.95e-08!9;UBERON:0001277!5.95e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.60e-33,31;UBERON:0005409,7.97e-21,47;UBERON:0000344,1.68e-20,15;UBERON:0001242,7.00e-15,13;UBERON:0001262,7.00e-15,13;UBERON:0004786,7.00e-15,13;UBERON:0004923,1.46e-14,24;UBERON:0003350,1.80e-12,9;UBERON:0004808,1.80e-12,9;UBERON:0001277,1.80e-12,9;UBERON:0001007,2.13e-10,116;UBERON:0001555,2.13e-10,116;UBERON:0007026,2.13e-10,116;UBERON:0004119,3.81e-10,118;UBERON:0000925,3.81e-10,118;UBERON:0006595,3.81e-10,118;UBERON:0000485,4.26e-10,11;UBERON:0001962,2.68e-08,2;UBERON:0001961,2.68e-08,2;UBERON:0001744,2.68e-08,2;UBERON:0004921,2.97e-08,114 | |||
|phase1_expression=0,7.32848356042658,10.9199817453489,1.51232105653415,1.50268718983904,2.01455126294268,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5192650109604,19.7291981717766,11.4846392823004,6.03066794622705,9.69620547086501,0.380046838912748,0.756090389279792,2.21730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75979933595425,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94753809370836,1.32225283331772,0,0,0,0.80673409849337,0.667134131534611,1.71203063501303,2.37264530772256,5.27036655116835,5.7807098024062,3.18330355265841,3.50935356814416,2.69645822596266,0.432276099749388,1.7922714592893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37280706594041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80899805217755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,0,0,0.188218760830661,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,7.32848356042658,10.9199817453489,1.51232105653415,1.50268718983904,2.01455126294268,3.27057696833736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5192650109604,19.7291981717766,11.4846392823004,6.03066794622705,9.69620547086501,0.380046838912748,0.756090389279792,2.21730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75979933595425,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94753809370836,1.32225283331772,0,0,0,0.80673409849337,0.667134131534611,1.71203063501303,2.37264530772256,5.27036655116835,5.7807098024062,3.18330355265841,3.50935356814416,2.69645822596266,0.432276099749388,1.7922714592893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37280706594041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80899805217755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,0,0,0.188218760830661,0,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr9:46051114..46051123,+ | |||
}} | }} |
Latest revision as of 05:42, 5 August 2015
Short description: | p@chr9:46051114..46051123, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46051114..46051123, + |
Coexpression cluster: | MCL_coexpression_mm9:191 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.53e-19 | 6 |
gut absorptive cell | 5.53e-19 | 6 |
enterocyte | 5.53e-19 | 6 |
columnar/cuboidal epithelial cell | 3.40e-16 | 7 |
intestinal epithelial cell | 1.80e-12 | 9 |
epithelial cell of alimentary canal | 1.80e-12 | 9 |
epithelial cell | 1.31e-11 | 25 |
M cell of gut | 2.85e-11 | 3 |
endo-epithelial cell | 3.04e-07 | 15 |
endodermal cell | 4.05e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.60e-33 | 31 |
gastrointestinal system | 7.97e-21 | 47 |
mucosa | 1.68e-20 | 15 |
intestinal mucosa | 7.00e-15 | 13 |
wall of intestine | 7.00e-15 | 13 |
gastrointestinal system mucosa | 7.00e-15 | 13 |
organ component layer | 1.46e-14 | 24 |
epithelium of mucosa | 1.80e-12 | 9 |
gastrointestinal system epithelium | 1.80e-12 | 9 |
intestinal epithelium | 1.80e-12 | 9 |
digestive system | 2.13e-10 | 116 |
digestive tract | 2.13e-10 | 116 |
primitive gut | 2.13e-10 | 116 |
endoderm-derived structure | 3.81e-10 | 118 |
endoderm | 3.81e-10 | 118 |
presumptive endoderm | 3.81e-10 | 118 |
simple columnar epithelium | 4.26e-10 | 11 |
gut-associated lymphoid tissue | 2.68e-08 | 2 |
mucosa-associated lymphoid tissue | 2.68e-08 | 2 |
lymphoid tissue | 2.68e-08 | 2 |
subdivision of digestive tract | 2.97e-08 | 114 |