FFCP PHASE1:Mm9::chr6:126690631..126690641,-: Difference between revisions
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{{FFCP|EntrezGene=16494|HGNC=|MCL_coexpression_id=1605|UniProt=Q61923|association_with_transcript=38bp_to_ENSMUST00000040751_5end|description=CAGE_peak_4_at_Kcna6_5end|id=chr6:126690631..126690641,-|ontology_enrichment_celltype=CL:0000221!3.24e-17!44;CL:0000133!3.24e-17!44;CL:0002319!2.23e-16!43;CL:0000540!9.00e-16!33;CL:0000047!9.00e-16!33;CL:0000031!9.00e-16!33;CL:0000404!9.00e-16!33;CL:0000055!4.07e-12!50;CL:0000393!1.59e-11!39;CL:0000211!1.59e-11!39;CL:0000117!1.45e-09!23;CL:0000337!1.45e-09!23;CL:0000107!7.00e-09!9|ontology_enrichment_celltype_v019_2=CL:0000540,2.77e-23,33;CL:0000047,2.77e-23,33;CL:0000031,2.77e-23,33;CL:0000404,2.77e-23,33;CL:0000107,1.16e-21,9;CL:0000221,2.47e-21,44;CL:0000133,2.47e-21,44;CL:0002319,2.38e-19,43;CL:0000393,3.81e-19,39;CL:0000211,3.81e-19,39;CL:0002321,6.48e-12,70;CL:0002612,5.27e-10,3;CL:0000117,7.03e-09,23;CL:0000337,7.03e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.57e-29!75;UBERON:0001016!7.57e-29!75;UBERON:0001017!9.52e-28!73;UBERON:0005743!9.52e-28!73;UBERON:0004121!6.23e-27!102;UBERON:0000924!6.23e-27!102;UBERON:0006601!6.23e-27!102;UBERON:0002346!2.68e-20!71;UBERON:0003075!2.68e-20!71;UBERON:0007284!2.68e-20!71;UBERON:0001049!9.54e-20!52;UBERON:0005068!9.54e-20!52;UBERON:0006241!9.54e-20!52;UBERON:0007135!9.54e-20!52;UBERON:0002020!1.42e-17!34;UBERON:0000955!9.77e-17!50;UBERON:0006238!9.77e-17!50;UBERON:0002616!2.73e-16!49;UBERON:0000033!3.97e-15!63;UBERON:0003080!6.45e-14!40;UBERON:0002791!8.59e-14!29;UBERON:0003528!8.59e-14!29;UBERON:0001893!8.59e-14!29;UBERON:0002780!3.93e-13!39;UBERON:0001890!3.93e-13!39;UBERON:0006240!3.93e-13!39;UBERON:0003056!4.42e-13!49;UBERON:0000010!1.29e-09!11;UBERON:0000956!5.95e-09!21;UBERON:0001869!5.95e-09!21;UBERON:0000203!5.95e-09!21;UBERON:0002410!7.00e-09!9;UBERON:0002619!8.67e-08!17;UBERON:0007811!2.59e-07!86;UBERON:0000153!3.01e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.32e-29,75;UBERON:0001017,1.21e-27,73;UBERON:0004121,7.23e-24,95;UBERON:0000924,7.23e-24,95;UBERON:0006601,7.23e-24,95;UBERON:0000010,4.47e-22,11;UBERON:0002410,1.16e-21,9;UBERON:0000073,7.50e-18,54;UBERON:0001049,1.29e-14,52;UBERON:0005068,1.29e-14,52;UBERON:0006241,1.29e-14,52;UBERON:0007135,1.29e-14,52;UBERON:0002346,2.01e-14,64;UBERON:0003075,2.01e-14,64;UBERON:0007284,2.01e-14,64;UBERON:0010371,9.80e-14,73;UBERON:0002020,1.08e-11,34;UBERON:0003076,1.58e-11,12;UBERON:0003057,1.58e-11,12;UBERON:0000011,2.61e-10,3;UBERON:0000013,3.22e-10,3;UBERON:0002257,5.27e-10,3;UBERON:0010314,5.27e-10,92;UBERON:0001948,6.71e-10,5;UBERON:0002315,6.71e-10,5;UBERON:0002616,1.28e-09,46;UBERON:0000955,2.35e-09,47;UBERON:0006238,2.35e-09,47;UBERON:0011216,5.93e-09,194;UBERON:0002240,2.94e-08,6;UBERON:0005174,2.94e-08,6;UBERON:0001137,2.94e-08,6;UBERON:0001896,3.15e-07,2;UBERON:0002298,3.15e-07,2;UBERON:0005290,3.15e-07,2;UBERON:0010096,3.15e-07,2;UBERON:0002950,4.47e-07,4;UBERON:0001891,4.47e-07,4;UBERON:0009616,4.47e-07,4;UBERON:0010286,4.47e-07,4;UBERON:0002021,4.64e-07,10;UBERON:0000411,4.64e-07,10;UBERON:0001950,4.64e-07,10;UBERON:0003080,9.93e-07,40|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0.135005938331691,0.420649922702764,0.571301968807607,1.10434270475807,0.122490799214954,0.191690942036473,0.919218786610021,0,1.27687338085188,2.61131106535614,0.659431438650969,0.365950574409639,1.04182674111352,1.11673199600552,0.56276261003168,1.06958773443767,2.35702868378934,1.85083185038834,1.3047961207771,0.151452386666368,1.73814588245607,0,0,0,0,0,0,0,0,0,0,2.25349471642689,0,0,0,0,0,0,0,0,0,0,0,0.691846491768175,0.301445281105245,0.587943535678524,0,0,0,0,0.161766849947409,0,0,0,0.585561594023094,1.25668024088073,0,0,0,0,2.24685959107234,0.457500602818626,1.00523481690292,0.695297280769106,0.511430914660661,0.83115217823824,2.27137768294861,0.101839363850316,0,0,0,0,0.229902104433473,0,0.150704817835715,0.612328492361951,0.12811372028485,0.281105173679186,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0,0.233530684734339,0,0,0.0810688095458557,0.146199987425332,0,0,0.420579897128254,0.514523061896422,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.189709611372772,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,1.60550589987792,1.87538698547525,0,0,0.631016438832513,1.56175497718655,2.15423397732799,2.15071918157297,1.55959071857676,3.11384183867716,2.42886421004937,1.75353514746787,1.58115111178609,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0,0.658196082408484,0.913394847343798,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.238744688006273,0.164140899745061,0,0.741701208042039,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0,0.404593039154462,0.41326727862668,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0.337912250981556,0.234714477291508,0.2604087696879,0.209718688851422,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,1.38097570952153,0,0.859265911718438,1.37016503954128,0,1.35004500046361,0.45032120322422,1.35942722695261,0.51776031175182,0.207574695168353,0.399024873401031,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.384150914429216,0.402048282689293,0,0.695305955669133,0.38581844092741,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.543216455383447,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0.999242311751784,0,0.214871054048298,0,0.220591419119515,0.463735671240843|short_description=p4@Kcna6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16494 | |||
|HGNC= | |||
|MCL_coexpression_id=1605 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q61923 | |||
|association_with_transcript=38bp_to_ENSMUST00000040751_5end | |||
|cluster_id=chr6:126690631..126690641,- | |||
|description=CAGE_peak_4_at_Kcna6_5end | |||
|id=chr6:126690631..126690641,- | |||
|ontology_enrichment_celltype=CL:0000221!3.24e-17!44;CL:0000133!3.24e-17!44;CL:0002319!2.23e-16!43;CL:0000540!9.00e-16!33;CL:0000047!9.00e-16!33;CL:0000031!9.00e-16!33;CL:0000404!9.00e-16!33;CL:0000055!4.07e-12!50;CL:0000393!1.59e-11!39;CL:0000211!1.59e-11!39;CL:0000117!1.45e-09!23;CL:0000337!1.45e-09!23;CL:0000107!7.00e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.77e-23,33;CL:0000047,2.77e-23,33;CL:0000031,2.77e-23,33;CL:0000404,2.77e-23,33;CL:0000107,1.16e-21,9;CL:0000221,2.47e-21,44;CL:0000133,2.47e-21,44;CL:0002319,2.38e-19,43;CL:0000393,3.81e-19,39;CL:0000211,3.81e-19,39;CL:0002321,6.48e-12,70;CL:0002612,5.27e-10,3;CL:0000117,7.03e-09,23;CL:0000337,7.03e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.57e-29!75;UBERON:0001016!7.57e-29!75;UBERON:0001017!9.52e-28!73;UBERON:0005743!9.52e-28!73;UBERON:0004121!6.23e-27!102;UBERON:0000924!6.23e-27!102;UBERON:0006601!6.23e-27!102;UBERON:0002346!2.68e-20!71;UBERON:0003075!2.68e-20!71;UBERON:0007284!2.68e-20!71;UBERON:0001049!9.54e-20!52;UBERON:0005068!9.54e-20!52;UBERON:0006241!9.54e-20!52;UBERON:0007135!9.54e-20!52;UBERON:0002020!1.42e-17!34;UBERON:0000955!9.77e-17!50;UBERON:0006238!9.77e-17!50;UBERON:0002616!2.73e-16!49;UBERON:0000033!3.97e-15!63;UBERON:0003080!6.45e-14!40;UBERON:0002791!8.59e-14!29;UBERON:0003528!8.59e-14!29;UBERON:0001893!8.59e-14!29;UBERON:0002780!3.93e-13!39;UBERON:0001890!3.93e-13!39;UBERON:0006240!3.93e-13!39;UBERON:0003056!4.42e-13!49;UBERON:0000010!1.29e-09!11;UBERON:0000956!5.95e-09!21;UBERON:0001869!5.95e-09!21;UBERON:0000203!5.95e-09!21;UBERON:0002410!7.00e-09!9;UBERON:0002619!8.67e-08!17;UBERON:0007811!2.59e-07!86;UBERON:0000153!3.01e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.32e-29,75;UBERON:0001017,1.21e-27,73;UBERON:0004121,7.23e-24,95;UBERON:0000924,7.23e-24,95;UBERON:0006601,7.23e-24,95;UBERON:0000010,4.47e-22,11;UBERON:0002410,1.16e-21,9;UBERON:0000073,7.50e-18,54;UBERON:0001049,1.29e-14,52;UBERON:0005068,1.29e-14,52;UBERON:0006241,1.29e-14,52;UBERON:0007135,1.29e-14,52;UBERON:0002346,2.01e-14,64;UBERON:0003075,2.01e-14,64;UBERON:0007284,2.01e-14,64;UBERON:0010371,9.80e-14,73;UBERON:0002020,1.08e-11,34;UBERON:0003076,1.58e-11,12;UBERON:0003057,1.58e-11,12;UBERON:0000011,2.61e-10,3;UBERON:0000013,3.22e-10,3;UBERON:0002257,5.27e-10,3;UBERON:0010314,5.27e-10,92;UBERON:0001948,6.71e-10,5;UBERON:0002315,6.71e-10,5;UBERON:0002616,1.28e-09,46;UBERON:0000955,2.35e-09,47;UBERON:0006238,2.35e-09,47;UBERON:0011216,5.93e-09,194;UBERON:0002240,2.94e-08,6;UBERON:0005174,2.94e-08,6;UBERON:0001137,2.94e-08,6;UBERON:0001896,3.15e-07,2;UBERON:0002298,3.15e-07,2;UBERON:0005290,3.15e-07,2;UBERON:0010096,3.15e-07,2;UBERON:0002950,4.47e-07,4;UBERON:0001891,4.47e-07,4;UBERON:0009616,4.47e-07,4;UBERON:0010286,4.47e-07,4;UBERON:0002021,4.64e-07,10;UBERON:0000411,4.64e-07,10;UBERON:0001950,4.64e-07,10;UBERON:0003080,9.93e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.388859798148567,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0.103689612308478,0.135005938331691,0.420649922702764,0.571301968807607,1.10434270475807,0.122490799214954,0.191690942036473,0.919218786610021,0,1.27687338085188,2.61131106535614,0.659431438650969,0.365950574409639,1.04182674111352,1.11673199600552,0.56276261003168,1.06958773443767,2.35702868378934,1.85083185038834,1.3047961207771,0.151452386666368,1.73814588245607,0,0,0,0,0,0,0,0,0,0,2.25349471642689,0,0,0,0,0,0,0,0,0,0,0,0.691846491768175,0.301445281105245,0.587943535678524,0,0,0,0,0.161766849947409,0,0,0,0.585561594023094,1.25668024088073,0,0,0,0,2.24685959107234,0.457500602818626,1.00523481690292,0.695297280769106,0.511430914660661,0.83115217823824,2.27137768294861,0.101839363850316,0,0,0,0,0.229902104433473,0,0.150704817835715,0.612328492361951,0.12811372028485,0.281105173679186,0,0,0.189106080167819,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0,0.233530684734339,0,0,0.0810688095458557,0.146199987425332,0,0,0.420579897128254,0.514523061896422,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0.210407459670956,0.189709611372772,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,1.60550589987792,1.87538698547525,0,0,0.631016438832513,1.56175497718655,2.15423397732799,2.15071918157297,1.55959071857676,3.11384183867716,2.42886421004937,1.75353514746787,1.58115111178609,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0,0.658196082408484,0.913394847343798,0,0,0,0.16488625294148,0.161464426695906,0.120625849856312,0.238744688006273,0.164140899745061,0,0.741701208042039,0,0,0.185194527369712,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0.209088296014469,0,0.404593039154462,0.41326727862668,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0.337912250981556,0.234714477291508,0.2604087696879,0.209718688851422,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,1.12950368523413,1.38097570952153,0,0.859265911718438,1.37016503954128,0,1.35004500046361,0.45032120322422,1.35942722695261,0.51776031175182,0.207574695168353,0.399024873401031,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.384150914429216,0.402048282689293,0,0.695305955669133,0.38581844092741,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.543216455383447,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0.999242311751784,0,0.214871054048298,0,0.220591419119515,0.463735671240843 | |||
|short_description=p4@Kcna6 | |||
}} |
Revision as of 04:45, 5 August 2015
Short description: | p4@Kcna6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Kcna6_5end |
Coexpression cluster: | MCL_coexpression_mm9:1605 |
Association with transcript: | 38bp_to_ENSMUST00000040751_5end |
EntrezGene: | 16494 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.77e-23 | 33 |
neuronal stem cell | 2.77e-23 | 33 |
neuroblast | 2.77e-23 | 33 |
electrically signaling cell | 2.77e-23 | 33 |
autonomic neuron | 1.16e-21 | 9 |
ectodermal cell | 2.47e-21 | 44 |
neurectodermal cell | 2.47e-21 | 44 |
neural cell | 2.38e-19 | 43 |
electrically responsive cell | 3.81e-19 | 39 |
electrically active cell | 3.81e-19 | 39 |
embryonic cell | 6.48e-12 | 70 |
neuron of the ventral spinal cord | 5.27e-10 | 3 |
CNS neuron (sensu Vertebrata) | 7.03e-09 | 23 |
neuroblast (sensu Vertebrata) | 7.03e-09 | 23 |