FFCP PHASE1:Mm9::chr1:168095547..168095559,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=916 | |MCL_coexpression_id=916 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:168095547..168095559,+ | |||
|description=CAGE_peak_at_chr1:168095547..168095559,+ | |description=CAGE_peak_at_chr1:168095547..168095559,+ | ||
|id=chr1:168095547..168095559,+ | |id=chr1:168095547..168095559,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.40e-14!9;CL:0002251!3.40e-14!9;CL:0000239!5.87e-13!6;CL:0000677!5.87e-13!6;CL:0000212!5.87e-13!6;CL:0000584!5.87e-13!6;CL:0000075!5.32e-11!7;CL:0002076!5.85e-10!15;CL:0000066!2.34e-08!25;CL:0000223!4.63e-07!20 | |ontology_enrichment_celltype=CL:0002563!3.40e-14!9;CL:0002251!3.40e-14!9;CL:0000239!5.87e-13!6;CL:0000677!5.87e-13!6;CL:0000212!5.87e-13!6;CL:0000584!5.87e-13!6;CL:0000075!5.32e-11!7;CL:0002076!5.85e-10!15;CL:0000066!2.34e-08!25;CL:0000223!4.63e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.32e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.13e-32!43;UBERON:0005409!1.32e-27!59;UBERON:0000344!1.96e-27!15;UBERON:0001242!8.78e-23!13;UBERON:0000060!8.78e-23!13;UBERON:0001262!8.78e-23!13;UBERON:0004786!8.78e-23!13;UBERON:0004923!7.57e-16!24;UBERON:0003350!3.40e-14!9;UBERON:0004808!3.40e-14!9;UBERON:0001277!3.40e-14!9;UBERON:0001007!6.31e-14!128;UBERON:0001555!6.31e-14!128;UBERON:0007026!6.31e-14!128;UBERON:0004119!1.37e-13!130;UBERON:0000925!1.37e-13!130;UBERON:0006595!1.37e-13!130;UBERON:0004921!7.49e-12!126;UBERON:0004185!7.49e-12!126;UBERON:0000485!2.32e-11!11;UBERON:0000331!5.05e-08!3;UBERON:0002116!5.05e-08!3;UBERON:0001204!5.05e-08!3;UBERON:0001168!5.05e-08!3 | |ontology_enrichment_uberon=UBERON:0000160!4.13e-32!43;UBERON:0005409!1.32e-27!59;UBERON:0000344!1.96e-27!15;UBERON:0001242!8.78e-23!13;UBERON:0000060!8.78e-23!13;UBERON:0001262!8.78e-23!13;UBERON:0004786!8.78e-23!13;UBERON:0004923!7.57e-16!24;UBERON:0003350!3.40e-14!9;UBERON:0004808!3.40e-14!9;UBERON:0001277!3.40e-14!9;UBERON:0001007!6.31e-14!128;UBERON:0001555!6.31e-14!128;UBERON:0007026!6.31e-14!128;UBERON:0004119!1.37e-13!130;UBERON:0000925!1.37e-13!130;UBERON:0006595!1.37e-13!130;UBERON:0004921!7.49e-12!126;UBERON:0004185!7.49e-12!126;UBERON:0000485!2.32e-11!11;UBERON:0000331!5.05e-08!3;UBERON:0002116!5.05e-08!3;UBERON:0001204!5.05e-08!3;UBERON:0001168!5.05e-08!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,6.18e-22,4;UBERON:0000160,3.77e-20,31;UBERON:0000344,5.68e-18,15;UBERON:0000331,3.81e-17,3;UBERON:0002116,3.81e-17,3;UBERON:0001204,3.81e-17,3;UBERON:0001168,3.81e-17,3;UBERON:0005409,2.42e-15,47;UBERON:0001962,7.08e-13,2;UBERON:0001961,7.08e-13,2;UBERON:0001744,7.08e-13,2;UBERON:0004923,5.33e-11,24;UBERON:0001242,1.09e-10,13;UBERON:0001262,1.09e-10,13;UBERON:0004786,1.09e-10,13;UBERON:0002465,7.12e-09,3;UBERON:0001007,1.29e-07,116;UBERON:0001555,1.29e-07,116;UBERON:0007026,1.29e-07,116;UBERON:0004119,1.87e-07,118;UBERON:0000925,1.87e-07,118;UBERON:0006595,1.87e-07,118;UBERON:0003199,3.14e-07,1 | |||
|phase1_expression=0,2.09385244583617,0.909998478779072,0.90739263392049,0.500895729946347,0.671517087647559,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.63959083084396,5.73523202667925,0,1.29228598847722,3.44753972297422,4.56056206695297,1.76421090831952,1.99557459589774,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,1.85115396664481,0,0,0.257734922644187,0.403367049246685,0.889512175379481,0.760902504450237,0.949058123089023,0.494096864172033,0.502670417600539,0.795825888164603,0.19496408711912,3.59527763461689,1.94524244887225,3.38540164532424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.0826534557253359,0,1.94422459937689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,2.09385244583617,0.909998478779072,0.90739263392049,0.500895729946347,0.671517087647559,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.63959083084396,5.73523202667925,0,1.29228598847722,3.44753972297422,4.56056206695297,1.76421090831952,1.99557459589774,0,0,0,0,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61711931072457,1.85115396664481,0,0,0.257734922644187,0.403367049246685,0.889512175379481,0.760902504450237,0.949058123089023,0.494096864172033,0.502670417600539,0.795825888164603,0.19496408711912,3.59527763461689,1.94524244887225,3.38540164532424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.0826534557253359,0,1.94422459937689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr1:168095547..168095559,+ | |short_description=p@chr1:168095547..168095559,+ | ||
}} | }} |
Latest revision as of 04:38, 5 August 2015
Short description: | p@chr1:168095547..168095559, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:168095547..168095559, + |
Coexpression cluster: | MCL_coexpression_mm9:916 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.32e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
small intestine | 6.18e-22 | 4 |
intestine | 3.77e-20 | 31 |
mucosa | 5.68e-18 | 15 |
ileal mucosa | 3.81e-17 | 3 |
ileum | 3.81e-17 | 3 |
mucosa of small intestine | 3.81e-17 | 3 |
wall of small intestine | 3.81e-17 | 3 |
gastrointestinal system | 2.42e-15 | 47 |
gut-associated lymphoid tissue | 7.08e-13 | 2 |
mucosa-associated lymphoid tissue | 7.08e-13 | 2 |
lymphoid tissue | 7.08e-13 | 2 |
organ component layer | 5.33e-11 | 24 |
intestinal mucosa | 1.09e-10 | 13 |
wall of intestine | 1.09e-10 | 13 |
gastrointestinal system mucosa | 1.09e-10 | 13 |
lymphoid system | 7.12e-09 | 3 |
digestive system | 1.29e-07 | 116 |
digestive tract | 1.29e-07 | 116 |
primitive gut | 1.29e-07 | 116 |
endoderm-derived structure | 1.87e-07 | 118 |
endoderm | 1.87e-07 | 118 |
presumptive endoderm | 1.87e-07 | 118 |
egg chamber | 3.14e-07 | 1 |