FFCP PHASE1:Mm9::chr6:125287812..125287831,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:125287812..125287831,+ | |||
|description=CAGE_peak_at_chr6:125287812..125287831,+ | |description=CAGE_peak_at_chr6:125287812..125287831,+ | ||
|id=chr6:125287812..125287831,+ | |id=chr6:125287812..125287831,+ | ||
|ontology_enrichment_celltype=CL:0000473!1.61e-07!3;CL:0000627!1.61e-07!3;CL:0000682!1.61e-07!3 | |ontology_enrichment_celltype=CL:0000473!1.61e-07!3;CL:0000627!1.61e-07!3;CL:0000682!1.61e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.11e-27,3;CL:0000239,1.64e-23,6;CL:0000677,1.64e-23,6;CL:0000584,1.64e-23,6;CL:0000075,3.18e-20,7;CL:0000066,4.38e-17,25;CL:0002563,7.89e-16,9;CL:0002251,7.89e-16,9;CL:0000473,2.87e-12,7;CL:0002076,1.21e-09,15;CL:0000223,2.63e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!4.89e-09!14;UBERON:0000117!4.89e-09!14;UBERON:0000171!4.89e-09!14;UBERON:0000170!4.89e-09!14;UBERON:0005597!4.89e-09!14;UBERON:0000118!4.89e-09!14;UBERON:0000344!5.48e-08!15;UBERON:0005153!3.90e-07!17;UBERON:0005178!3.90e-07!17;UBERON:0005181!3.90e-07!17;UBERON:0002224!3.90e-07!17;UBERON:0000915!3.90e-07!17;UBERON:0008947!3.90e-07!17;UBERON:0003258!3.90e-07!17;UBERON:0004923!8.72e-07!24 | |ontology_enrichment_uberon=UBERON:0002048!4.89e-09!14;UBERON:0000117!4.89e-09!14;UBERON:0000171!4.89e-09!14;UBERON:0000170!4.89e-09!14;UBERON:0005597!4.89e-09!14;UBERON:0000118!4.89e-09!14;UBERON:0000344!5.48e-08!15;UBERON:0005153!3.90e-07!17;UBERON:0005178!3.90e-07!17;UBERON:0005181!3.90e-07!17;UBERON:0002224!3.90e-07!17;UBERON:0000915!3.90e-07!17;UBERON:0008947!3.90e-07!17;UBERON:0003258!3.90e-07!17;UBERON:0004923!8.72e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.98e-28,15;UBERON:0001962,2.91e-18,2;UBERON:0001961,2.91e-18,2;UBERON:0001744,2.91e-18,2;UBERON:0004923,1.79e-17,24;UBERON:0001242,7.89e-17,13;UBERON:0001262,7.89e-17,13;UBERON:0004786,7.89e-17,13;UBERON:0003350,7.89e-16,9;UBERON:0004808,7.89e-16,9;UBERON:0001277,7.89e-16,9;UBERON:0000485,5.03e-13,11;UBERON:0002465,1.63e-12,3;UBERON:0003199,6.88e-10,1;UBERON:0000160,4.14e-07,31 | |||
|phase1_expression=0,27.9180326111489,20.9299650119187,0,0,10.0727563147134,12.3814699515629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,18.079143775655,12.3881011776272,21.8208146363708,25.8457197695445,31.8897424375116,0,0,13.7472916606289,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0.167506257441816,0.476087281772027,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0.221985953374065,0.269141569828427,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,27.9180326111489,20.9299650119187,0,0,10.0727563147134,12.3814699515629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,18.079143775655,12.3881011776272,21.8208146363708,25.8457197695445,31.8897424375116,0,0,13.7472916606289,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.234690248288502,0.167506257441816,0.476087281772027,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0.221985953374065,0.269141569828427,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:125287812..125287831,+ | |short_description=p@chr6:125287812..125287831,+ | ||
}} | }} |
Latest revision as of 04:23, 5 August 2015
Short description: | p@chr6:125287812..125287831, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:125287812..125287831, + |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.11e-27 | 3 |
brush border epithelial cell | 1.64e-23 | 6 |
gut absorptive cell | 1.64e-23 | 6 |
enterocyte | 1.64e-23 | 6 |
columnar/cuboidal epithelial cell | 3.18e-20 | 7 |
epithelial cell | 4.38e-17 | 25 |
intestinal epithelial cell | 7.89e-16 | 9 |
epithelial cell of alimentary canal | 7.89e-16 | 9 |
defensive cell | 2.87e-12 | 7 |
endo-epithelial cell | 1.21e-09 | 15 |
endodermal cell | 2.63e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.98e-28 | 15 |
gut-associated lymphoid tissue | 2.91e-18 | 2 |
mucosa-associated lymphoid tissue | 2.91e-18 | 2 |
lymphoid tissue | 2.91e-18 | 2 |
organ component layer | 1.79e-17 | 24 |
intestinal mucosa | 7.89e-17 | 13 |
wall of intestine | 7.89e-17 | 13 |
gastrointestinal system mucosa | 7.89e-17 | 13 |
epithelium of mucosa | 7.89e-16 | 9 |
gastrointestinal system epithelium | 7.89e-16 | 9 |
intestinal epithelium | 7.89e-16 | 9 |
simple columnar epithelium | 5.03e-13 | 11 |
lymphoid system | 1.63e-12 | 3 |
egg chamber | 6.88e-10 | 1 |
intestine | 4.14e-07 | 31 |