FFCP PHASE1:Mm9::chr12:70784685..70784698,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=137 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:70784685..70784698,- | |||
|description=CAGE_peak_at_chr12:70784685..70784698,- | |description=CAGE_peak_at_chr12:70784685..70784698,- | ||
|id=chr12:70784685..70784698,- | |id=chr12:70784685..70784698,- | ||
|ontology_enrichment_celltype=CL:0002563!3.58e-12!9;CL:0002251!3.58e-12!9;CL:0000066!8.50e-11!25;CL:0000075!3.90e-09!7;CL:0000063!9.94e-09!66;CL:0000239!1.06e-08!6;CL:0000677!1.06e-08!6;CL:0000212!1.06e-08!6;CL:0000584!1.06e-08!6;CL:0000223!4.32e-08!20 | |ontology_enrichment_celltype=CL:0002563!3.58e-12!9;CL:0002251!3.58e-12!9;CL:0000066!8.50e-11!25;CL:0000075!3.90e-09!7;CL:0000063!9.94e-09!66;CL:0000239!1.06e-08!6;CL:0000677!1.06e-08!6;CL:0000212!1.06e-08!6;CL:0000584!1.06e-08!6;CL:0000223!4.32e-08!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.42e-33,9;CL:0002251,1.42e-33,9;CL:0000239,2.59e-28,6;CL:0000677,2.59e-28,6;CL:0000584,2.59e-28,6;CL:0000223,2.85e-28,20;CL:0000066,1.73e-26,25;CL:0000075,3.12e-24,7;CL:0002076,8.09e-20,15;CL:0000182,7.55e-10,5;CL:0002250,1.05e-07,3;CL:0002321,6.12e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.36e-08,3;DOID:4045,8.36e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0003350!3.58e-12!9;UBERON:0004808!3.58e-12!9;UBERON:0001277!3.58e-12!9;UBERON:0000485!3.39e-11!11;UBERON:0000344!2.13e-09!15;UBERON:0001242!1.26e-07!13;UBERON:0000060!1.26e-07!13;UBERON:0001262!1.26e-07!13;UBERON:0004786!1.26e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.42e-33,9;UBERON:0004808,1.42e-33,9;UBERON:0001277,1.42e-33,9;UBERON:0000485,2.51e-27,11;UBERON:0001242,5.36e-23,13;UBERON:0001262,5.36e-23,13;UBERON:0004786,5.36e-23,13;UBERON:0000344,8.09e-20,15;UBERON:0004923,4.73e-12,24;UBERON:0000490,8.04e-11,66;UBERON:0003929,2.78e-09,55;UBERON:0000160,4.06e-09,31;UBERON:0005911,4.59e-07,69 | |||
|phase1_expression=0,2.44282785347553,1.36499771816861,1.20985684522732,2.00358291978539,1.51091344720701,1.40167584357315,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0.297872853602656,0.522399578277871,0.319984845586813,0.68822784320151,1.14846392823004,0.86152399231815,0.861884930743556,0,0,0,0.635030673459631,0,0,2.3108129580102,0.498703936075477,2.6542016314108,7.53356935326434,0.7813353445238,2.09409497589519,3.52938892818609,2.73218193983378,1.45653105909346,0,0,0.183546752161682,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.69593466105033,0,2.719885334831,1.61910957491345,0,0,0,0.170430322578058,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0.301445281105245,0,0,0,0,0,0,0,0.969750506270444,0,0,0,0,0.359445373517761,0.599902730993408,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54408744268829,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0.166845105716094,0,0,0,0.72353147925725,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0,0.727067458955011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0.161464426695906,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0.27338845544205,0,0.509935289981566,0.419854356970974,0.552799895217695,0,0,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0,0,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0.187283014939765,0,0,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,2.44282785347553,1.36499771816861,1.20985684522732,2.00358291978539,1.51091344720701,1.40167584357315,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0.297872853602656,0.522399578277871,0.319984845586813,0.68822784320151,1.14846392823004,0.86152399231815,0.861884930743556,0,0,0,0.635030673459631,0,0,2.3108129580102,0.498703936075477,2.6542016314108,7.53356935326434,0.7813353445238,2.09409497589519,3.52938892818609,2.73218193983378,1.45653105909346,0,0,0.183546752161682,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.69593466105033,0,2.719885334831,1.61910957491345,0,0,0,0.170430322578058,0.259786004602869,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0.301445281105245,0,0,0,0,0,0,0,0.969750506270444,0,0,0,0,0.359445373517761,0.599902730993408,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54408744268829,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0.592905254174298,0.166845105716094,0,0,0,0.72353147925725,0.25462585178142,0,0.324270453550071,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0,0.727067458955011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0,0.161464426695906,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0.27338845544205,0,0.509935289981566,0.419854356970974,0.552799895217695,0,0,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0,0,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0.187283014939765,0,0,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr12:70784685..70784698,- | |short_description=p@chr12:70784685..70784698,- | ||
}} | }} |
Latest revision as of 04:20, 5 August 2015
Short description: | p@chr12:70784685..70784698, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:70784685..70784698, - |
Coexpression cluster: | MCL_coexpression_mm9:137 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.42e-33 | 9 |
epithelial cell of alimentary canal | 1.42e-33 | 9 |
brush border epithelial cell | 2.59e-28 | 6 |
gut absorptive cell | 2.59e-28 | 6 |
enterocyte | 2.59e-28 | 6 |
endodermal cell | 2.85e-28 | 20 |
epithelial cell | 1.73e-26 | 25 |
columnar/cuboidal epithelial cell | 3.12e-24 | 7 |
endo-epithelial cell | 8.09e-20 | 15 |
hepatocyte | 7.55e-10 | 5 |
intestinal crypt stem cell | 1.05e-07 | 3 |
embryonic cell | 6.12e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.42e-33 | 9 |
gastrointestinal system epithelium | 1.42e-33 | 9 |
intestinal epithelium | 1.42e-33 | 9 |
simple columnar epithelium | 2.51e-27 | 11 |
intestinal mucosa | 5.36e-23 | 13 |
wall of intestine | 5.36e-23 | 13 |
gastrointestinal system mucosa | 5.36e-23 | 13 |
mucosa | 8.09e-20 | 15 |
organ component layer | 4.73e-12 | 24 |
unilaminar epithelium | 8.04e-11 | 66 |
gut epithelium | 2.78e-09 | 55 |
intestine | 4.06e-09 | 31 |
endo-epithelium | 4.59e-07 | 69 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.36e-08 | 3 |
muscle cancer | 8.36e-08 | 3 |