FFCP PHASE1:Mm9::chr17:57200158..57200180,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:57200158..57200180,+ | |||
|description=CAGE_peak_at_chr17:57200158..57200180,+ | |description=CAGE_peak_at_chr17:57200158..57200180,+ | ||
|id=chr17:57200158..57200180,+ | |id=chr17:57200158..57200180,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.70e-10!9;CL:0002251!1.70e-10!9;CL:0000066!3.36e-08!25;CL:0002076!1.21e-07!15;CL:0000791!2.04e-07!9;CL:0000789!2.04e-07!9;CL:0002420!2.04e-07!9;CL:0002419!2.04e-07!9;CL:0000790!2.04e-07!9;CL:0000239!2.24e-07!6;CL:0000677!2.24e-07!6;CL:0000212!2.24e-07!6;CL:0000584!2.24e-07!6;CL:0000223!3.27e-07!20 | |ontology_enrichment_celltype=CL:0002563!1.70e-10!9;CL:0002251!1.70e-10!9;CL:0000066!3.36e-08!25;CL:0002076!1.21e-07!15;CL:0000791!2.04e-07!9;CL:0000789!2.04e-07!9;CL:0002420!2.04e-07!9;CL:0002419!2.04e-07!9;CL:0000790!2.04e-07!9;CL:0000239!2.24e-07!6;CL:0000677!2.24e-07!6;CL:0000212!2.24e-07!6;CL:0000584!2.24e-07!6;CL:0000223!3.27e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.43e-42,9;CL:0002251,3.43e-42,9;CL:0000239,5.79e-28,6;CL:0000677,5.79e-28,6;CL:0000584,5.79e-28,6;CL:0002076,7.25e-25,15;CL:0000075,6.35e-24,7;CL:0000223,9.17e-23,20;CL:0000066,1.27e-21,25;CL:0002250,9.88e-16,3;CL:0000838,2.66e-13,12;CL:0000791,1.29e-12,9;CL:0000789,1.29e-12,9;CL:0002420,1.29e-12,9;CL:0002419,1.29e-12,9;CL:0000790,1.29e-12,9;CL:0000542,3.01e-12,13;CL:0000051,3.01e-12,13;CL:0000084,2.66e-10,11;CL:0000827,2.66e-10,11;CL:0000624,1.64e-09,8;CL:0000738,2.89e-09,17;CL:0002087,2.89e-09,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!1.70e-10!9;UBERON:0004808!1.70e-10!9;UBERON:0001277!1.70e-10!9;UBERON:0000485!5.57e-08!11;UBERON:0001242!1.55e-07!13;UBERON:0000060!1.55e-07!13;UBERON:0001262!1.55e-07!13;UBERON:0004786!1.55e-07!13;UBERON:0000344!1.95e-07!15 | |ontology_enrichment_uberon=UBERON:0003350!1.70e-10!9;UBERON:0004808!1.70e-10!9;UBERON:0001277!1.70e-10!9;UBERON:0000485!5.57e-08!11;UBERON:0001242!1.55e-07!13;UBERON:0000060!1.55e-07!13;UBERON:0001262!1.55e-07!13;UBERON:0004786!1.55e-07!13;UBERON:0000344!1.95e-07!15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.43e-42,9;UBERON:0004808,3.43e-42,9;UBERON:0001277,3.43e-42,9;UBERON:0000485,2.54e-34,11;UBERON:0001242,7.21e-29,13;UBERON:0001262,7.21e-29,13;UBERON:0004786,7.21e-29,13;UBERON:0000344,7.25e-25,15;UBERON:0004923,4.32e-15,24;UBERON:0003929,9.17e-13,55;UBERON:0000160,2.11e-11,31;UBERON:0000490,2.73e-10,66;UBERON:0005911,9.45e-10,69;UBERON:0005409,4.38e-07,47 | |||
|phase1_expression=0,1.04692622291808,1.81999695755814,6.35174843744343,6.51164448930251,1.34303417529512,1.63528848416868,1.16210991097419,1.54867594366833,0.936258105287974,0.513653904676515,0,1.71200729931206,0.874204024189974,0,0,0,0.315462165358238,0,0,0.0850432901510698,0,0,0,0.45881856213434,0.57423196411502,1.29228598847722,0.861884930743556,0,0.252030129759931,0,0,0,0,15.5979874665688,3.32469290716985,20.0085969137122,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,1.34226084846189,2.17608642603403,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0,0.210324961351382,0,0,0,0,0,0,0,0,0.395658863190582,0.274462930807229,0,0.279182999001381,0,0,0,0,0,0,0,5.50742528533188,1.72084775396277,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.432982082022428,0,0.505524445014783,0,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0.255457055208591,0.11981512450592,0,0,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0,0,0,0.248813941220186,0.252722758433675,0.210441855886474,0,0,0,0,0,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0,0,0,0.949058123089023,0,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0,0,0.147610147979602,0.470996183524124,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0.631016438832513,0.390438744296638,0,0,0.445597348164788,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0,0,0.177340233642274,0,0,0.608929898229199,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,0,0,0.206386867963223,0,0,0,0,0,0.559805809294632,0.138199973804424,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0.518459893167171,1.24267862617385,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0.168956125490778,0,0,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.798049746802062,0.341467211508268,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0.355905054372522,0,0,0,0.385813221962283,0,0,0,0,0,0 | |phase1_expression=0,1.04692622291808,1.81999695755814,6.35174843744343,6.51164448930251,1.34303417529512,1.63528848416868,1.16210991097419,1.54867594366833,0.936258105287974,0.513653904676515,0,1.71200729931206,0.874204024189974,0,0,0,0.315462165358238,0,0,0.0850432901510698,0,0,0,0.45881856213434,0.57423196411502,1.29228598847722,0.861884930743556,0,0.252030129759931,0,0,0,0,15.5979874665688,3.32469290716985,20.0085969137122,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,1.34226084846189,2.17608642603403,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0.207379224616955,0,0.210324961351382,0,0,0,0,0,0,0,0,0.395658863190582,0.274462930807229,0,0.279182999001381,0,0,0,0,0,0,0,5.50742528533188,1.72084775396277,0.679971333707751,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.432982082022428,0,0.505524445014783,0,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0.255457055208591,0.11981512450592,0,0,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0,0,0,0.248813941220186,0.252722758433675,0.210441855886474,0,0,0,0,0,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0.102904612379284,0,0,0,0,0,0,0,0,0.949058123089023,0,0.251335208800269,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0,0,0.147610147979602,0.470996183524124,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0.163863314715738,0,0.289298117163023,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0.631016438832513,0.390438744296638,0,0,0.445597348164788,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0.295301892880773,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0,0,0.177340233642274,0,0,0.608929898229199,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,0,0,0.206386867963223,0,0,0,0,0,0.559805809294632,0.138199973804424,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0.518459893167171,1.24267862617385,0,0.149516546043979,0.165458490457098,0,0.258319646955462,0.168956125490778,0,0,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.798049746802062,0.341467211508268,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0,0.145346416632329,0,0.0846146078916765,0,0,0,0,0.355905054372522,0,0,0,0.385813221962283,0,0,0,0,0,0 | ||
|short_description=p@chr17:57200158..57200180,+ | |short_description=p@chr17:57200158..57200180,+ | ||
}} | }} |
Latest revision as of 04:01, 5 August 2015
Short description: | p@chr17:57200158..57200180, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:57200158..57200180, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.43e-42 | 9 |
epithelial cell of alimentary canal | 3.43e-42 | 9 |
brush border epithelial cell | 5.79e-28 | 6 |
gut absorptive cell | 5.79e-28 | 6 |
enterocyte | 5.79e-28 | 6 |
endo-epithelial cell | 7.25e-25 | 15 |
columnar/cuboidal epithelial cell | 6.35e-24 | 7 |
endodermal cell | 9.17e-23 | 20 |
epithelial cell | 1.27e-21 | 25 |
intestinal crypt stem cell | 9.88e-16 | 3 |
lymphoid lineage restricted progenitor cell | 2.66e-13 | 12 |
mature alpha-beta T cell | 1.29e-12 | 9 |
alpha-beta T cell | 1.29e-12 | 9 |
immature T cell | 1.29e-12 | 9 |
mature T cell | 1.29e-12 | 9 |
immature alpha-beta T cell | 1.29e-12 | 9 |
lymphocyte | 3.01e-12 | 13 |
common lymphoid progenitor | 3.01e-12 | 13 |
T cell | 2.66e-10 | 11 |
pro-T cell | 2.66e-10 | 11 |
CD4-positive, alpha-beta T cell | 1.64e-09 | 8 |
leukocyte | 2.89e-09 | 17 |
nongranular leukocyte | 2.89e-09 | 17 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.43e-42 | 9 |
gastrointestinal system epithelium | 3.43e-42 | 9 |
intestinal epithelium | 3.43e-42 | 9 |
simple columnar epithelium | 2.54e-34 | 11 |
intestinal mucosa | 7.21e-29 | 13 |
wall of intestine | 7.21e-29 | 13 |
gastrointestinal system mucosa | 7.21e-29 | 13 |
mucosa | 7.25e-25 | 15 |
organ component layer | 4.32e-15 | 24 |
gut epithelium | 9.17e-13 | 55 |
intestine | 2.11e-11 | 31 |
unilaminar epithelium | 2.73e-10 | 66 |
endo-epithelium | 9.45e-10 | 69 |
gastrointestinal system | 4.38e-07 | 47 |