FFCP PHASE1:Mm9::chr2:38469215..38469226,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:38469215..38469226,- | |||
|description=CAGE_peak_at_chr2:38469215..38469226,- | |description=CAGE_peak_at_chr2:38469215..38469226,- | ||
|id=chr2:38469215..38469226,- | |id=chr2:38469215..38469226,- | ||
|ontology_enrichment_celltype=CL:0000473!1.23e-08!3;CL:0000627!1.23e-08!3;CL:0000682!1.23e-08!3;CL:0000239!5.17e-07!6;CL:0000677!5.17e-07!6;CL:0000212!5.17e-07!6;CL:0000584!5.17e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.12e-25,3;CL:0000239,1.71e-21,6;CL:0000677,1.71e-21,6;CL:0000584,1.71e-21,6;CL:0000075,1.74e-18,7;CL:0000066,1.64e-15,25;CL:0002563,1.82e-14,9;CL:0002251,1.82e-14,9;CL:0000473,2.87e-11,7;CL:0000057,6.33e-09,1;CL:0000632,6.33e-09,1;CL:0002076,8.32e-09,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!2.38e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.96e-24,3;UBERON:0000344,5.50e-19,15;UBERON:0001962,4.76e-17,2;UBERON:0001961,4.76e-17,2;UBERON:0001744,4.76e-17,2;UBERON:0003350,1.82e-14,9;UBERON:0004808,1.82e-14,9;UBERON:0001277,1.82e-14,9;UBERON:0000485,6.71e-12,11;UBERON:0004923,7.99e-12,24;UBERON:0001242,4.07e-10,13;UBERON:0001262,4.07e-10,13;UBERON:0004786,4.07e-10,13;UBERON:0003199,2.52e-09,1;UBERON:0000029,4.39e-09,1;UBERON:0001097,4.39e-09,1;UBERON:0003968,4.39e-09,1;UBERON:0001467,4.39e-09,1 | |||
|phase1_expression=0,1.74487703819681,8.64498554840118,0,0,2.18243053485457,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.39969691173627,5.04700418347774,9.18771142584032,7.32295393470427,7.32602191132023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0.186399445825301,0,0,0,1.72084775396277,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0,0,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0,0.441683036920787,0,0,0,0.628340120440365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.642202359951168,0.468846746368813,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0.463735671240843 | |phase1_expression=0,1.74487703819681,8.64498554840118,0,0,2.18243053485457,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.39969691173627,5.04700418347774,9.18771142584032,7.32295393470427,7.32602191132023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0.186399445825301,0,0,0,1.72084775396277,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,1.8125651855302,0,0,0.304465478312141,0,0.150722640552623,0,0,0,0,0,0,0.441683036920787,0,0,0,0.628340120440365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0.642202359951168,0.468846746368813,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0.463735671240843 | ||
|short_description=p@chr2:38469215..38469226,- | |short_description=p@chr2:38469215..38469226,- | ||
}} | }} |
Latest revision as of 03:56, 5 August 2015
Short description: | p@chr2:38469215..38469226, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:38469215..38469226, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.12e-25 | 3 |
brush border epithelial cell | 1.71e-21 | 6 |
gut absorptive cell | 1.71e-21 | 6 |
enterocyte | 1.71e-21 | 6 |
columnar/cuboidal epithelial cell | 1.74e-18 | 7 |
epithelial cell | 1.64e-15 | 25 |
intestinal epithelial cell | 1.82e-14 | 9 |
epithelial cell of alimentary canal | 1.82e-14 | 9 |
defensive cell | 2.87e-11 | 7 |
fibroblast | 6.33e-09 | 1 |
hepatic stellate cell | 6.33e-09 | 1 |
endo-epithelial cell | 8.32e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 1.96e-24 | 3 |
mucosa | 5.50e-19 | 15 |
gut-associated lymphoid tissue | 4.76e-17 | 2 |
mucosa-associated lymphoid tissue | 4.76e-17 | 2 |
lymphoid tissue | 4.76e-17 | 2 |
epithelium of mucosa | 1.82e-14 | 9 |
gastrointestinal system epithelium | 1.82e-14 | 9 |
intestinal epithelium | 1.82e-14 | 9 |
simple columnar epithelium | 6.71e-12 | 11 |
organ component layer | 7.99e-12 | 24 |
intestinal mucosa | 4.07e-10 | 13 |
wall of intestine | 4.07e-10 | 13 |
gastrointestinal system mucosa | 4.07e-10 | 13 |
egg chamber | 2.52e-09 | 1 |
lymph node | 4.39e-09 | 1 |
axillary lymph node | 4.39e-09 | 1 |
peripheral lymph node | 4.39e-09 | 1 |
shoulder | 4.39e-09 | 1 |