FFCP PHASE1:Mm9::chr12:58646974..58647003,-: Difference between revisions
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{{FFCP|EntrezGene=15375|HGNC=|MCL_coexpression_id=2786|UniProt=P35582|association_with_transcript=104bp_to_ENSMUST00000044380,NM_008259,uc007nps.1_5end|description=CAGE_peak_1_at_Foxa1_5end|id=chr12:58646974..58647003,-|ontology_enrichment_celltype=CL:0000223!4.84e-07!20;CL:0000066!5.23e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,4.68e-09,25;CL:0000223,9.52e-09,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!3.00e-25!128;UBERON:0001555!3.00e-25!128;UBERON:0007026!3.00e-25!128;UBERON:0004119!1.71e-24!130;UBERON:0000925!1.71e-24!130;UBERON:0006595!1.71e-24!130;UBERON:0004921!3.09e-24!126;UBERON:0004185!3.09e-24!126;UBERON:0005911!3.59e-11!69;UBERON:0000077!4.46e-11!97;UBERON:0005409!9.88e-11!59;UBERON:0005178!1.40e-10!17;UBERON:0005181!1.40e-10!17;UBERON:0002224!1.40e-10!17;UBERON:0000915!1.40e-10!17;UBERON:0008947!1.40e-10!17;UBERON:0003258!1.40e-10!17;UBERON:0001041!1.88e-10!92;UBERON:0009854!5.07e-10!23;UBERON:0009856!5.07e-10!23;UBERON:0009569!8.69e-10!66;UBERON:0002107!2.29e-09!22;UBERON:0007499!2.29e-09!22;UBERON:0006925!2.29e-09!22;UBERON:0009497!2.29e-09!22;UBERON:0000015!2.29e-09!22;UBERON:0002423!2.29e-09!22;UBERON:0006235!2.29e-09!22;UBERON:0008835!2.29e-09!22;UBERON:0003894!2.29e-09!22;UBERON:0004161!2.29e-09!22;UBERON:0008836!2.29e-09!22;UBERON:0002365!5.56e-09!25;UBERON:0002330!5.56e-09!25;UBERON:0000160!1.49e-08!43;UBERON:0002048!1.87e-08!14;UBERON:0000117!1.87e-08!14;UBERON:0000171!1.87e-08!14;UBERON:0000170!1.87e-08!14;UBERON:0005597!1.87e-08!14;UBERON:0000118!1.87e-08!14;UBERON:0005153!6.16e-08!17;UBERON:0005177!1.85e-07!85;UBERON:0000344!4.07e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0001007,5.14e-30,116;UBERON:0001555,5.14e-30,116;UBERON:0007026,5.14e-30,116;UBERON:0004119,6.85e-29,118;UBERON:0000925,6.85e-29,118;UBERON:0006595,6.85e-29,118;UBERON:0004921,8.03e-29,114;UBERON:0005409,8.18e-17,47;UBERON:0000160,3.81e-14,31;UBERON:0001041,2.35e-12,80;UBERON:0005178,2.88e-12,17;UBERON:0005181,2.88e-12,17;UBERON:0002224,2.88e-12,17;UBERON:0000915,2.88e-12,17;UBERON:0008947,2.88e-12,17;UBERON:0003258,2.88e-12,17;UBERON:0009854,1.33e-11,23;UBERON:0009856,1.33e-11,23;UBERON:0002107,7.94e-11,22;UBERON:0007499,7.94e-11,22;UBERON:0006925,7.94e-11,22;UBERON:0009497,7.94e-11,22;UBERON:0000015,7.94e-11,22;UBERON:0002423,7.94e-11,22;UBERON:0006235,7.94e-11,22;UBERON:0008835,7.94e-11,22;UBERON:0003894,7.94e-11,22;UBERON:0004161,7.94e-11,22;UBERON:0008836,7.94e-11,22;UBERON:0002365,1.33e-10,25;UBERON:0002330,1.33e-10,25;UBERON:0005911,1.41e-10,69;UBERON:0009569,2.68e-10,66;UBERON:0002048,9.57e-10,14;UBERON:0000117,9.57e-10,14;UBERON:0000171,9.57e-10,14;UBERON:0000170,9.57e-10,14;UBERON:0005597,9.57e-10,14;UBERON:0000118,9.57e-10,14;UBERON:0005153,2.17e-09,17;UBERON:0011216,3.03e-08,194;UBERON:0000344,3.68e-08,15;UBERON:0001242,2.80e-07,13;UBERON:0001262,2.80e-07,13;UBERON:0004786,2.80e-07,13;UBERON:0005177,2.94e-07,79;UBERON:0005157,5.04e-07,20|phase1_expression=0,6.97950815278722,12.739978702907,3.62957053568196,8.01433167914156,35.7582849172325,35.2755087299244,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,3.99703463710028,0,0,8.63959083084396,9.40578052375397,17.8011908875656,21.9688618041128,19.6078821744159,11.5914285868388,8.31699428207772,24.1686256614282,0,0,0,9.24325183204079,9.30914014007557,11.637653306955,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0,0.839918529752175,5.75010257459886,0,0,0,0,0,0,4.24864567805155,2.11596391708813,1.90149421051854,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0.191690942036473,0,1.10115880999389,0.766124028511126,2.15049146558741,6.06676923558892,3.84248103130121,7.29278718779464,0.279182999001381,2.8138130501584,3.36156145108982,0.883885756421003,0.711858403995515,0.559198337475902,0,0,17.6817338108023,21.5105969245347,32.638624017972,30.7630819233556,24.0417274455638,29.1217476613268,8.28622078777336,0,0,0.35333957451034,0,0,0,0,47.4115379814559,54.4723710771462,59.1463600667296,8.5637909789295,0,0,0.693941307064543,1.52232739156071,0.691846491768175,0,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0,41.0061874679869,0,0,5.8755122697976,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0.62336413367868,0.324482526135515,0,0,0,0.420883711772948,0,0,0,0.452114453507145,0,0,0,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0.621377317606506,1.17263029990548,0,2.13070262026689,0,0.308534225774757,0.232533944750408,1.07309360559848,0.116765342367169,0,0.164167464079095,0.162137619091711,0,0,0,0,0,3.63460661282178,6.08236303326152,9.38468302355029,15.3276203427889,10.5671318284117,9.4791256572971,7.78323153457046,6.08722003560189,4.2707615539006,4.11747386810027,6.53471542880701,5.76973768919337,6.62877896205008,3.59527763461689,9.72621224436124,9.16049856970089,2.27601481143698,2.28497025219458,0,1.4255592949172,1.16371492300575,1.19230893813542,0.252946148497029,0.590440591918409,0.470996183524124,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15375 | |||
|HGNC= | |||
|MCL_coexpression_id=2786 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P35582 | |||
|association_with_transcript=104bp_to_ENSMUST00000044380,NM_008259,uc007nps.1_5end | |||
|cluster_id=chr12:58646974..58647003,- | |||
|description=CAGE_peak_1_at_Foxa1_5end | |||
|id=chr12:58646974..58647003,- | |||
|ontology_enrichment_celltype=CL:0000223!4.84e-07!20;CL:0000066!5.23e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.68e-09,25;CL:0000223,9.52e-09,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!3.00e-25!128;UBERON:0001555!3.00e-25!128;UBERON:0007026!3.00e-25!128;UBERON:0004119!1.71e-24!130;UBERON:0000925!1.71e-24!130;UBERON:0006595!1.71e-24!130;UBERON:0004921!3.09e-24!126;UBERON:0004185!3.09e-24!126;UBERON:0005911!3.59e-11!69;UBERON:0000077!4.46e-11!97;UBERON:0005409!9.88e-11!59;UBERON:0005178!1.40e-10!17;UBERON:0005181!1.40e-10!17;UBERON:0002224!1.40e-10!17;UBERON:0000915!1.40e-10!17;UBERON:0008947!1.40e-10!17;UBERON:0003258!1.40e-10!17;UBERON:0001041!1.88e-10!92;UBERON:0009854!5.07e-10!23;UBERON:0009856!5.07e-10!23;UBERON:0009569!8.69e-10!66;UBERON:0002107!2.29e-09!22;UBERON:0007499!2.29e-09!22;UBERON:0006925!2.29e-09!22;UBERON:0009497!2.29e-09!22;UBERON:0000015!2.29e-09!22;UBERON:0002423!2.29e-09!22;UBERON:0006235!2.29e-09!22;UBERON:0008835!2.29e-09!22;UBERON:0003894!2.29e-09!22;UBERON:0004161!2.29e-09!22;UBERON:0008836!2.29e-09!22;UBERON:0002365!5.56e-09!25;UBERON:0002330!5.56e-09!25;UBERON:0000160!1.49e-08!43;UBERON:0002048!1.87e-08!14;UBERON:0000117!1.87e-08!14;UBERON:0000171!1.87e-08!14;UBERON:0000170!1.87e-08!14;UBERON:0005597!1.87e-08!14;UBERON:0000118!1.87e-08!14;UBERON:0005153!6.16e-08!17;UBERON:0005177!1.85e-07!85;UBERON:0000344!4.07e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,5.14e-30,116;UBERON:0001555,5.14e-30,116;UBERON:0007026,5.14e-30,116;UBERON:0004119,6.85e-29,118;UBERON:0000925,6.85e-29,118;UBERON:0006595,6.85e-29,118;UBERON:0004921,8.03e-29,114;UBERON:0005409,8.18e-17,47;UBERON:0000160,3.81e-14,31;UBERON:0001041,2.35e-12,80;UBERON:0005178,2.88e-12,17;UBERON:0005181,2.88e-12,17;UBERON:0002224,2.88e-12,17;UBERON:0000915,2.88e-12,17;UBERON:0008947,2.88e-12,17;UBERON:0003258,2.88e-12,17;UBERON:0009854,1.33e-11,23;UBERON:0009856,1.33e-11,23;UBERON:0002107,7.94e-11,22;UBERON:0007499,7.94e-11,22;UBERON:0006925,7.94e-11,22;UBERON:0009497,7.94e-11,22;UBERON:0000015,7.94e-11,22;UBERON:0002423,7.94e-11,22;UBERON:0006235,7.94e-11,22;UBERON:0008835,7.94e-11,22;UBERON:0003894,7.94e-11,22;UBERON:0004161,7.94e-11,22;UBERON:0008836,7.94e-11,22;UBERON:0002365,1.33e-10,25;UBERON:0002330,1.33e-10,25;UBERON:0005911,1.41e-10,69;UBERON:0009569,2.68e-10,66;UBERON:0002048,9.57e-10,14;UBERON:0000117,9.57e-10,14;UBERON:0000171,9.57e-10,14;UBERON:0000170,9.57e-10,14;UBERON:0005597,9.57e-10,14;UBERON:0000118,9.57e-10,14;UBERON:0005153,2.17e-09,17;UBERON:0011216,3.03e-08,194;UBERON:0000344,3.68e-08,15;UBERON:0001242,2.80e-07,13;UBERON:0001262,2.80e-07,13;UBERON:0004786,2.80e-07,13;UBERON:0005177,2.94e-07,79;UBERON:0005157,5.04e-07,20 | |||
|phase1_expression=0,6.97950815278722,12.739978702907,3.62957053568196,8.01433167914156,35.7582849172325,35.2755087299244,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,3.99703463710028,0,0,8.63959083084396,9.40578052375397,17.8011908875656,21.9688618041128,19.6078821744159,11.5914285868388,8.31699428207772,24.1686256614282,0,0,0,9.24325183204079,9.30914014007557,11.637653306955,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0,0,0,0.839918529752175,5.75010257459886,0,0,0,0,0,0,4.24864567805155,2.11596391708813,1.90149421051854,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0.191690942036473,0,1.10115880999389,0.766124028511126,2.15049146558741,6.06676923558892,3.84248103130121,7.29278718779464,0.279182999001381,2.8138130501584,3.36156145108982,0.883885756421003,0.711858403995515,0.559198337475902,0,0,17.6817338108023,21.5105969245347,32.638624017972,30.7630819233556,24.0417274455638,29.1217476613268,8.28622078777336,0,0,0.35333957451034,0,0,0,0,47.4115379814559,54.4723710771462,59.1463600667296,8.5637909789295,0,0,0.693941307064543,1.52232739156071,0.691846491768175,0,0.117588707135705,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0,41.0061874679869,0,0,5.8755122697976,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0.62336413367868,0.324482526135515,0,0,0,0.420883711772948,0,0,0,0.452114453507145,0,0,0,0.258703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0.621377317606506,1.17263029990548,0,2.13070262026689,0,0.308534225774757,0.232533944750408,1.07309360559848,0.116765342367169,0,0.164167464079095,0.162137619091711,0,0,0,0,0,3.63460661282178,6.08236303326152,9.38468302355029,15.3276203427889,10.5671318284117,9.4791256572971,7.78323153457046,6.08722003560189,4.2707615539006,4.11747386810027,6.53471542880701,5.76973768919337,6.62877896205008,3.59527763461689,9.72621224436124,9.16049856970089,2.27601481143698,2.28497025219458,0,1.4255592949172,1.16371492300575,1.19230893813542,0.252946148497029,0.590440591918409,0.470996183524124,0.370191491765402,18.0836102523161,5.17219827719892,4.71741588271687,3.14806957338795,5.07150303471257,6.75296047306767,6.11102044275408,6.61701116136864,4.05338066937588,4.94210543738547,21.5652309791032,7.07067800570156,6.86482880852033,11.1134706296729,14.1723956682311,6.27176577772377,26.7892125741577,12.506433176852,17.9261474086228,14.9375675482166,23.2343345805617,21.9433197248779,28.8032805472077,22.4403695036469,14.6600684018758,11.0732344824387,15.4671125597762,15.2392882685636,12.9513736399422,12.0058718622655,0,0,0,1.37968373152366,0,0.117211686592203,0.163934945376675,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0.906970670894253,0.188605079755898,0.590603785761546,0.614870295887855,1.29214146584111,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.129358683782755,0,0.354680467284547,0.713475270408282,0.164549020602121,0.304464949114599,0.23467170806371,0,114.895295386635,0,0.322928853391811,0.0603129249281559,0.119372344003136,0.164140899745061,7.57850175237612,0,0,0.206386867963223,0,0,0,0,1.18984900995699,1.6794174278839,1.10559979043539,70.6456257331184,26.4140554640248,30.2946006019005,28.5134099769555,33.0359507702861,33.8461973806575,35.0647300600534,44.2195988130547,46.3308017311732,13.73918716893,28.5816084019986,0.56369293868419,0,0,0,0.129159823477731,0.506868376472335,0,0.13020438484395,0,0,0,0.948033361884535,0.202725215290164,0.821687657318618,0.649604114888975,0.895133478337407,0.39736270956253,0,0.147689527174577,0.403865799792591,0.15241361331,0.100826185136841,0.877120926657772,0.0962118416403295,0,15.6443964694496,0,0,0,70.7073914157817,0,0,1.71494703263253,39.6241962187937,0,0,0,0,0,0,0,0,0,0,1.45302286617847,3.99024873401031,1.70733605754134,2.18796045361465,2.93458427679175,4.59608771125035,4.22268782823069,4.73880631649457,3.20919209591815,5.55933865880354,3.54871019846336,2.26351609663291,5.05664140337365,5.31408764960415,4.82457939227151,4.28664322154766,4.1718357340148,3.8581844092741,2.88460130562315,5.2991611248383,3.77156177623957,1.77475806159337,4.29185141905178,3.63366041580821,4.89368778159719,4.65380343404221,4.024415403201,4.47218509444333,3.80251518768413,8.97827634652382,4.50813068871862,3.25064791839359,5.72923460437565,3.40861050609125,4.43685205256625,5.49583271463481,2.33931608445408,4.94203424311086,0,1.32354851471709,0 | |||
|short_description=p1@Foxa1 | |||
}} |
Revision as of 03:24, 5 August 2015
Short description: | p1@Foxa1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Foxa1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2786 |
Association with transcript: | 104bp_to_ENSMUST00000044380, NM_008259, uc007nps.1_5end |
EntrezGene: | 15375 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.68e-09 | 25 |
endodermal cell | 9.52e-09 | 20 |