FFCP PHASE1:Mm9::chr15:24875237..24875240,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:24875237..24875240,+ | |||
|description=CAGE_peak_at_chr15:24875237..24875240,+ | |description=CAGE_peak_at_chr15:24875237..24875240,+ | ||
|id=chr15:24875237..24875240,+ | |id=chr15:24875237..24875240,+ | ||
|ontology_enrichment_celltype=CL:0002563!3.77e-31!9;CL:0002251!3.77e-31!9;CL:0002076!3.30e-22!15;CL:0000066!3.94e-22!25;CL:0000239!1.14e-21!6;CL:0000677!1.14e-21!6;CL:0000212!1.14e-21!6;CL:0000584!1.14e-21!6;CL:0000075!1.68e-18!7;CL:0000223!3.06e-16!20;CL:0000473!5.33e-12!3;CL:0000627!5.33e-12!3;CL:0000682!5.33e-12!3;CL:0002250!4.91e-11!3;CL:0000063!3.44e-08!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.29e-35,9;CL:0002251,5.29e-35,9;CL:0000239,2.36e-30,6;CL:0000677,2.36e-30,6;CL:0000584,2.36e-30,6;CL:0000075,5.50e-26,7;CL:0000066,2.77e-23,25;CL:0002076,1.06e-20,15;CL:0000682,1.72e-16,3;CL:0000223,2.53e-15,20;CL:0002250,2.05e-07,3;CL:0000473,2.30e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.07e-46!15;UBERON:0001242!1.08e-38!13;UBERON:0000060!1.08e-38!13;UBERON:0001262!1.08e-38!13;UBERON:0004786!1.08e-38!13;UBERON:0003350!3.77e-31!9;UBERON:0004808!3.77e-31!9;UBERON:0001277!3.77e-31!9;UBERON:0004923!8.75e-28!24;UBERON:0000485!3.07e-25!11;UBERON:0000160!5.73e-14!43;UBERON:0000331!2.28e-12!3;UBERON:0002116!2.28e-12!3;UBERON:0001204!2.28e-12!3;UBERON:0001168!2.28e-12!3;UBERON:0005409!6.09e-11!59;UBERON:0001007!9.07e-10!128;UBERON:0001555!9.07e-10!128;UBERON:0007026!9.07e-10!128;UBERON:0004119!1.48e-09!130;UBERON:0000925!1.48e-09!130;UBERON:0006595!1.48e-09!130;UBERON:0001962!8.30e-09!2;UBERON:0001961!8.30e-09!2;UBERON:0001744!8.30e-09!2;UBERON:0003929!1.49e-08!55;UBERON:0004921!1.14e-07!126;UBERON:0004185!1.14e-07!126;UBERON:0000490!9.83e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.34e-57,15;UBERON:0001242,1.88e-46,13;UBERON:0001262,1.88e-46,13;UBERON:0004786,1.88e-46,13;UBERON:0003350,5.29e-35,9;UBERON:0004808,5.29e-35,9;UBERON:0001277,5.29e-35,9;UBERON:0004923,6.98e-35,24;UBERON:0000485,1.65e-28,11;UBERON:0000160,1.10e-18,31;UBERON:0000331,5.10e-17,3;UBERON:0002116,5.10e-17,3;UBERON:0001204,5.10e-17,3;UBERON:0001168,5.10e-17,3;UBERON:0002108,6.60e-13,4;UBERON:0001962,6.30e-12,2;UBERON:0001961,6.30e-12,2;UBERON:0001744,6.30e-12,2;UBERON:0005409,8.14e-12,47;UBERON:0002465,3.09e-08,3;UBERON:0001007,7.03e-07,116;UBERON:0001555,7.03e-07,116;UBERON:0007026,7.03e-07,116;UBERON:0004119,9.99e-07,118;UBERON:0000925,9.99e-07,118;UBERON:0006595,9.99e-07,118 | |||
|phase1_expression=0,2.44282785347553,2.27499619694768,2.11724947914781,6.51164448930251,2.18243053485457,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5194544411253,5.04700418347774,4.59385571292016,3.87685796543167,6.67960821326256,11.0213583284697,12.6015064879965,4.43461021310609,0,0,0,0.866554859253824,1.32987716286794,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16254326188832,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.44282785347553,2.27499619694768,2.11724947914781,6.51164448930251,2.18243053485457,4.90586545250604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5194544411253,5.04700418347774,4.59385571292016,3.87685796543167,6.67960821326256,11.0213583284697,12.6015064879965,4.43461021310609,0,0,0,0.866554859253824,1.32987716286794,1.02084678131185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16254326188832,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:24875237..24875240,+ | |short_description=p@chr15:24875237..24875240,+ | ||
}} | }} |
Latest revision as of 02:51, 5 August 2015
Short description: | p@chr15:24875237..24875240, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:24875237..24875240, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.29e-35 | 9 |
epithelial cell of alimentary canal | 5.29e-35 | 9 |
brush border epithelial cell | 2.36e-30 | 6 |
gut absorptive cell | 2.36e-30 | 6 |
enterocyte | 2.36e-30 | 6 |
columnar/cuboidal epithelial cell | 5.50e-26 | 7 |
epithelial cell | 2.77e-23 | 25 |
endo-epithelial cell | 1.06e-20 | 15 |
M cell of gut | 1.72e-16 | 3 |
endodermal cell | 2.53e-15 | 20 |
intestinal crypt stem cell | 2.05e-07 | 3 |
defensive cell | 2.30e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 9.34e-57 | 15 |
intestinal mucosa | 1.88e-46 | 13 |
wall of intestine | 1.88e-46 | 13 |
gastrointestinal system mucosa | 1.88e-46 | 13 |
epithelium of mucosa | 5.29e-35 | 9 |
gastrointestinal system epithelium | 5.29e-35 | 9 |
intestinal epithelium | 5.29e-35 | 9 |
organ component layer | 6.98e-35 | 24 |
simple columnar epithelium | 1.65e-28 | 11 |
intestine | 1.10e-18 | 31 |
ileal mucosa | 5.10e-17 | 3 |
ileum | 5.10e-17 | 3 |
mucosa of small intestine | 5.10e-17 | 3 |
wall of small intestine | 5.10e-17 | 3 |
small intestine | 6.60e-13 | 4 |
gut-associated lymphoid tissue | 6.30e-12 | 2 |
mucosa-associated lymphoid tissue | 6.30e-12 | 2 |
lymphoid tissue | 6.30e-12 | 2 |
gastrointestinal system | 8.14e-12 | 47 |
lymphoid system | 3.09e-08 | 3 |
digestive system | 7.03e-07 | 116 |
digestive tract | 7.03e-07 | 116 |
primitive gut | 7.03e-07 | 116 |
endoderm-derived structure | 9.99e-07 | 118 |
endoderm | 9.99e-07 | 118 |
presumptive endoderm | 9.99e-07 | 118 |