FFCP PHASE1:Mm9::chr12:56478126..56478145,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:56478126..56478145,+
|short_description=p@chr12:56478126..56478145,+
|description=CAGE_peak_at_chr12:56478126..56478145,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=410 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:56478126..56478145,+ | |||
|description=CAGE_peak_at_chr12:56478126..56478145,+ | |||
|id=chr12:56478126..56478145,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.82e-08!9;CL:0002251!2.82e-08!9;CL:0002076!6.38e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.33e-14,9;CL:0002251,1.33e-14,9;CL:0002076,4.23e-12,15;CL:0000066,1.49e-11,25;CL:0000239,1.36e-08,6;CL:0000677,1.36e-08,6;CL:0000584,1.36e-08,6;CL:0000223,1.59e-08,20;CL:0002250,7.62e-08,3;CL:0000682,1.75e-07,3;CL:0000075,2.68e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.61e-20!59;UBERON:0004119!4.29e-19!130;UBERON:0000925!4.29e-19!130;UBERON:0006595!4.29e-19!130;UBERON:0001007!2.43e-18!128;UBERON:0001555!2.43e-18!128;UBERON:0007026!2.43e-18!128;UBERON:0000160!1.05e-17!43;UBERON:0004921!6.35e-17!126;UBERON:0004185!6.35e-17!126;UBERON:0000344!6.05e-13!15;UBERON:0001242!3.32e-11!13;UBERON:0000060!3.32e-11!13;UBERON:0001262!3.32e-11!13;UBERON:0004786!3.32e-11!13;UBERON:0004923!1.61e-08!24;UBERON:0003350!2.82e-08!9;UBERON:0004808!2.82e-08!9;UBERON:0001277!2.82e-08!9;UBERON:0000485!2.75e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.13e-31,47;UBERON:0000160,9.88e-26,31;UBERON:0000344,1.53e-25,15;UBERON:0001242,1.78e-21,13;UBERON:0001262,1.78e-21,13;UBERON:0004786,1.78e-21,13;UBERON:0004923,8.81e-17,24;UBERON:0001007,3.77e-15,116;UBERON:0001555,3.77e-15,116;UBERON:0007026,3.77e-15,116;UBERON:0004119,9.61e-15,118;UBERON:0000925,9.61e-15,118;UBERON:0006595,9.61e-15,118;UBERON:0003350,1.33e-14,9;UBERON:0004808,1.33e-14,9;UBERON:0001277,1.33e-14,9;UBERON:0004921,4.25e-13,114;UBERON:0000485,1.20e-11,11;UBERON:0000945,4.61e-07,16;UBERON:0010039,4.61e-07,16 | |||
|phase1_expression=0.320297694209588,6.63053274514786,5.0049916332849,2.11724947914781,0.500895729946347,6.71517087647559,12.3814699515629,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.340173160604279,0.992909512008853,3.91799683708403,14.2393256286132,12.6175104586944,9.76194338995534,13.7843838770904,11.2045040996662,2.28028103347649,3.02436155711917,8.42575940490158,0,0,0,19.3530585233354,19.1169842162266,21.029443695024,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.865964164044856,1.01343946190039,2.02209778005913,0.68510327831436,0,0.148442139064825,0,0,0.230615497256059,0,0,0.125666591329675,2.47194967734374,0,0,0,0.220841518460394,0,1.86391761218122,0,0,4.59822699375465,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0,0,5.28670052774077,0.528901133327089,0,0.464473343720877,1.03093969057675,0.201683524623343,0.667134131534611,1.14135375667535,2.37264530772256,2.30578536613615,2.01068167040216,1.39269530428806,0.38992817423824,0.898819408654221,2.37751854862164,2.19055400579804,0,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0.189709611372772,0,0,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.704070744865506,0.335012514883631,0.476087281772027,0.390267295715598,0.472905432318573,0.44292937929755,0.159454768657487,0.163863314715738,0,0.723245292907558,0,0,0.491764273019036,4.41498794087572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.534196811001766,0.325773918707152,3.13443233647817,0,0,1.209294227859,0.188605079755898,0.590603785761546,0.614870295887855,0.258428293168221,1.09060118843252,0.712994756769443,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,20.0480829783174,0.790839983952838,1.42323626988794,2.48412283890143,5.22720740036172,5.02233896616208,6.87808166562586,5.20716771069616,8.89970202745701,0.90730481304255,1.86401793926078,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0.948033361884535,0.405450430580328,0.205421914329655,0.649604114888975,0,0.39736270956253,0.120195449519969,0.295379054349154,0.302899349844443,0.0762068066549998,0.504130925684203,0.0974578807397524,0.288635524920988,0.467507608726276,0.453460767230423,0,0.0897138566094757,0.167884616364078,1.73870634628971,0.563047426353546,3.6630324853453,1.50057865355346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0.192075457214608,0.114870937911227,0,0,0,0.412085900803307,0,0,0,0,0,0.188218760830661,0.0846146078916765,0.365855945745545,0,0.135804113845862,0.561142271657738,0.118635018124174,0.29551344712669,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0.429742108096597,0,0,0.231867835620421 | |phase1_expression=0.320297694209588,6.63053274514786,5.0049916332849,2.11724947914781,0.500895729946347,6.71517087647559,12.3814699515629,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.340173160604279,0.992909512008853,3.91799683708403,14.2393256286132,12.6175104586944,9.76194338995534,13.7843838770904,11.2045040996662,2.28028103347649,3.02436155711917,8.42575940490158,0,0,0,19.3530585233354,19.1169842162266,21.029443695024,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.865964164044856,1.01343946190039,2.02209778005913,0.68510327831436,0,0.148442139064825,0,0,0.230615497256059,0,0,0.125666591329675,2.47194967734374,0,0,0,0.220841518460394,0,1.86391761218122,0,0,4.59822699375465,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0,0,5.28670052774077,0.528901133327089,0,0.464473343720877,1.03093969057675,0.201683524623343,0.667134131534611,1.14135375667535,2.37264530772256,2.30578536613615,2.01068167040216,1.39269530428806,0.38992817423824,0.898819408654221,2.37751854862164,2.19055400579804,0,0.114248512609729,0,0,0.387904974335251,0.0701358198903186,0.189709611372772,0,0,0.246794327843601,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0.704070744865506,0.335012514883631,0.476087281772027,0.390267295715598,0.472905432318573,0.44292937929755,0.159454768657487,0.163863314715738,0,0.723245292907558,0,0,0.491764273019036,4.41498794087572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.534196811001766,0.325773918707152,3.13443233647817,0,0,1.209294227859,0.188605079755898,0.590603785761546,0.614870295887855,0.258428293168221,1.09060118843252,0.712994756769443,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,20.0480829783174,0.790839983952838,1.42323626988794,2.48412283890143,5.22720740036172,5.02233896616208,6.87808166562586,5.20716771069616,8.89970202745701,0.90730481304255,1.86401793926078,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0.948033361884535,0.405450430580328,0.205421914329655,0.649604114888975,0,0.39736270956253,0.120195449519969,0.295379054349154,0.302899349844443,0.0762068066549998,0.504130925684203,0.0974578807397524,0.288635524920988,0.467507608726276,0.453460767230423,0,0.0897138566094757,0.167884616364078,1.73870634628971,0.563047426353546,3.6630324853453,1.50057865355346,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0.192075457214608,0.114870937911227,0,0,0,0.412085900803307,0,0,0,0,0,0.188218760830661,0.0846146078916765,0.365855945745545,0,0.135804113845862,0.561142271657738,0.118635018124174,0.29551344712669,0,0.154936841185966,0,0.249810577937946,0.467863216890817,0.429742108096597,0,0,0.231867835620421 | ||
|short_description=p@chr12:56478126..56478145,+ | |||
}} | }} |
Latest revision as of 02:51, 5 August 2015
Short description: | p@chr12:56478126..56478145, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:56478126..56478145, + |
Coexpression cluster: | MCL_coexpression_mm9:410 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.33e-14 | 9 |
epithelial cell of alimentary canal | 1.33e-14 | 9 |
endo-epithelial cell | 4.23e-12 | 15 |
epithelial cell | 1.49e-11 | 25 |
brush border epithelial cell | 1.36e-08 | 6 |
gut absorptive cell | 1.36e-08 | 6 |
enterocyte | 1.36e-08 | 6 |
endodermal cell | 1.59e-08 | 20 |
intestinal crypt stem cell | 7.62e-08 | 3 |
M cell of gut | 1.75e-07 | 3 |
columnar/cuboidal epithelial cell | 2.68e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.13e-31 | 47 |
intestine | 9.88e-26 | 31 |
mucosa | 1.53e-25 | 15 |
intestinal mucosa | 1.78e-21 | 13 |
wall of intestine | 1.78e-21 | 13 |
gastrointestinal system mucosa | 1.78e-21 | 13 |
organ component layer | 8.81e-17 | 24 |
digestive system | 3.77e-15 | 116 |
digestive tract | 3.77e-15 | 116 |
primitive gut | 3.77e-15 | 116 |
endoderm-derived structure | 9.61e-15 | 118 |
endoderm | 9.61e-15 | 118 |
presumptive endoderm | 9.61e-15 | 118 |
epithelium of mucosa | 1.33e-14 | 9 |
gastrointestinal system epithelium | 1.33e-14 | 9 |
intestinal epithelium | 1.33e-14 | 9 |
subdivision of digestive tract | 4.25e-13 | 114 |
simple columnar epithelium | 1.20e-11 | 11 |
stomach | 4.61e-07 | 16 |
food storage organ | 4.61e-07 | 16 |