FFCP PHASE1:Mm9::chr1:162237596..162237613,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=320 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:162237596..162237613,- | |||
|description=CAGE_peak_at_chr1:162237596..162237613,- | |||
|id=chr1:162237596..162237613,- | |||
|ontology_enrichment_celltype=CL:0000988!1.18e-09!32;CL:0002032!1.18e-09!32;CL:0000037!1.18e-09!32;CL:0000566!1.18e-09!32;CL:0000837!1.18e-09!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.63e-19,32;CL:0002032,5.63e-19,32;CL:0000037,5.63e-19,32;CL:0000837,5.63e-19,32;CL:0000049,8.26e-12,19;CL:0002031,1.66e-11,25;CL:0002320,1.81e-11,46;CL:0000134,1.81e-11,46;CL:0000553,1.46e-10,6;CL:0000556,1.46e-10,6;CL:0000838,4.72e-09,12;CL:0000219,5.71e-09,54;CL:0000542,3.17e-08,13;CL:0000051,3.17e-08,13;CL:0000763,8.21e-08,16;CL:0000084,1.45e-07,11;CL:0000827,1.45e-07,11;CL:0000050,9.78e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.59e-13!128;UBERON:0001555!1.59e-13!128;UBERON:0007026!1.59e-13!128;UBERON:0004119!6.92e-13!130;UBERON:0000925!6.92e-13!130;UBERON:0006595!6.92e-13!130;UBERON:0004921!1.07e-12!126;UBERON:0004185!1.07e-12!126;UBERON:0002193!1.15e-11!48;UBERON:0002405!3.21e-11!70;UBERON:0002390!3.83e-10!45;UBERON:0003061!3.83e-10!45;UBERON:0004177!1.70e-08!29;UBERON:0003104!1.73e-08!131;UBERON:0009142!1.73e-08!131;UBERON:0001041!3.77e-08!92;UBERON:0000077!3.90e-08!97;UBERON:0005057!9.10e-08!51;UBERON:0000926!5.80e-07!193;UBERON:0004120!5.80e-07!193;UBERON:0006603!5.80e-07!193;UBERON:0005911!8.32e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.81e-18,48;UBERON:0002405,4.81e-18,48;UBERON:0002390,2.78e-16,45;UBERON:0003061,2.78e-16,45;UBERON:0002384,1.81e-11,46;UBERON:0004177,1.80e-09,29;UBERON:0005057,1.80e-09,29;UBERON:0002371,8.21e-08,16;UBERON:0000077,3.05e-07,35;UBERON:0003081,7.14e-07,87 | |||
|phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0.503637815735669,0.934450562382103,1.29123323441576,0.140788722151667,0.468129052643987,0.513653904676515,0,6.16322627752341,5.59490575481583,2.6648780945253,1.61980213911861,1.39912375625629,13.5648731104042,16.4537320326887,13.580468857537,0.340173160604279,20.0567721425788,18.5451850288644,0.639969691173627,1.37645568640302,0,0,0.646413698057667,0.570070258369122,1.26015064879965,0.665191531965914,0,0,0,0.577703239502549,0.664938581433969,0.204169356262369,1.25559489221072,3.1253413780952,4.18818995179039,0,0,0,0,0,0,0,0,0,0,0,0,15.1004345451963,5.80289713609076,5.71359458542189,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.842666520790511,0,0,0,0.422530259330042,0,0,0,0,0,0,1.1418387971906,11.1343289968284,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0.23517741427141,0,0,0.144599356919912,0.884610551949874,0,1.32504911076236,0.969750506270444,0,0,0,0,8.50687383992034,8.99854096490112,6.98886248901856,0,0,0,0,0,0,0,0.203678727700633,0.622034853050465,0,0.420883711772948,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0.219195732427575,0,0,0.205782136407943,0,7.72434506044558,5.1469581422943,9.37739548005456,0,0.234526059981096,0,0,0,0,0,0,0,0,0.32833492815819,0,0.146199987425332,0.439100230582101,0.134206418760372,0,0,0.330418782983798,0,0.213288250535234,0,0.257734922644187,0.403367049246685,0.22237804384487,0.380451252225118,0.949058123089023,0.494096864172033,0.754005626400808,0.795825888164603,0.38992817423824,0.898819408654221,0.648414149624083,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0.333690211432188,1.17935397067922,0.674586337154561,1.21716072833102,0.72353147925725,0.50925170356284,0.575392274901621,0.162135226775035,0.274561413188081,0,0.372140947668503,0.624075346229121,0,0.179397413521912,0,1.66277871149944,0,0,0,0,0.167506257441816,0,0.390267295715598,0.630540576424764,0.221464689648775,0.318909537314974,0.81931657357869,1.55416483679306,1.44649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,2.65490276679926,0.242780636154981,0,0.377210159511796,0,0,0,0,0,1.26414703174326,2.10837217149998,2.06271086496374,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0.119372344003136,0,0.291480836629851,0.18542530201051,2.73393409276564,0.619160603889667,0.555583582109135,2.63715839806567,4.10082683163076,3.88922894451088,3.90950388985867,7.83728133012485,5.38979897837253,0.954670618015114,0,0,0,0,0.655087691238533,0.134864346384821,0.495920734352016,1.04702376793612,0.518459893167171,0.621339313086926,0,0,0.165458490457098,0,0,0,0,0,0,0,0,2.52808896502543,0.405450430580328,0.102710957164827,0.25984164595559,0,0.79472541912506,1.08175904567972,1.47689527174577,2.01932899896295,1.905170166375,1.91569751759997,2.14407337627455,2.21287235772758,4.44132228289962,0,0,0,0,0.579568782096571,0.187682475451182,0.73260649706906,0.214368379079066,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0.429742108096597,0,0,0.231867835620421 | |phase1_expression=0.480446541314382,0,0,0.30246421130683,0,0.503637815735669,0.934450562382103,1.29123323441576,0.140788722151667,0.468129052643987,0.513653904676515,0,6.16322627752341,5.59490575481583,2.6648780945253,1.61980213911861,1.39912375625629,13.5648731104042,16.4537320326887,13.580468857537,0.340173160604279,20.0567721425788,18.5451850288644,0.639969691173627,1.37645568640302,0,0,0.646413698057667,0.570070258369122,1.26015064879965,0.665191531965914,0,0,0,0.577703239502549,0.664938581433969,0.204169356262369,1.25559489221072,3.1253413780952,4.18818995179039,0,0,0,0,0,0,0,0,0,0,0,0,15.1004345451963,5.80289713609076,5.71359458542189,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.842666520790511,0,0,0,0.422530259330042,0,0,0,0,0,0,1.1418387971906,11.1343289968284,0.148442139064825,0.173485326766136,0.304465478312141,0,0,0.23517741427141,0,0,0.144599356919912,0.884610551949874,0,1.32504911076236,0.969750506270444,0,0,0,0,8.50687383992034,8.99854096490112,6.98886248901856,0,0,0,0,0,0,0,0.203678727700633,0.622034853050465,0,0.420883711772948,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0.219195732427575,0,0,0.205782136407943,0,7.72434506044558,5.1469581422943,9.37739548005456,0,0.234526059981096,0,0,0,0,0,0,0,0,0.32833492815819,0,0.146199987425332,0.439100230582101,0.134206418760372,0,0,0.330418782983798,0,0.213288250535234,0,0.257734922644187,0.403367049246685,0.22237804384487,0.380451252225118,0.949058123089023,0.494096864172033,0.754005626400808,0.795825888164603,0.38992817423824,0.898819408654221,0.648414149624083,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0.333690211432188,1.17935397067922,0.674586337154561,1.21716072833102,0.72353147925725,0.50925170356284,0.575392274901621,0.162135226775035,0.274561413188081,0,0.372140947668503,0.624075346229121,0,0.179397413521912,0,1.66277871149944,0,0,0,0,0.167506257441816,0,0.390267295715598,0.630540576424764,0.221464689648775,0.318909537314974,0.81931657357869,1.55416483679306,1.44649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,2.65490276679926,0.242780636154981,0,0.377210159511796,0,0,0,0,0,1.26414703174326,2.10837217149998,2.06271086496374,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0.119372344003136,0,0.291480836629851,0.18542530201051,2.73393409276564,0.619160603889667,0.555583582109135,2.63715839806567,4.10082683163076,3.88922894451088,3.90950388985867,7.83728133012485,5.38979897837253,0.954670618015114,0,0,0,0,0.655087691238533,0.134864346384821,0.495920734352016,1.04702376793612,0.518459893167171,0.621339313086926,0,0,0.165458490457098,0,0,0,0,0,0,0,0,2.52808896502543,0.405450430580328,0.102710957164827,0.25984164595559,0,0.79472541912506,1.08175904567972,1.47689527174577,2.01932899896295,1.905170166375,1.91569751759997,2.14407337627455,2.21287235772758,4.44132228289962,0,0,0,0,0.579568782096571,0.187682475451182,0.73260649706906,0.214368379079066,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0,0.320919209591815,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0.429742108096597,0,0,0.231867835620421 | ||
|short_description=p@chr1:162237596..162237613,- | |||
}} | }} |
Latest revision as of 02:32, 5 August 2015
Short description: | p@chr1:162237596..162237613, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:162237596..162237613, - |
Coexpression cluster: | MCL_coexpression_mm9:320 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.63e-19 | 32 |
hematopoietic oligopotent progenitor cell | 5.63e-19 | 32 |
hematopoietic stem cell | 5.63e-19 | 32 |
hematopoietic multipotent progenitor cell | 5.63e-19 | 32 |
common myeloid progenitor | 8.26e-12 | 19 |
hematopoietic lineage restricted progenitor cell | 1.66e-11 | 25 |
connective tissue cell | 1.81e-11 | 46 |
mesenchymal cell | 1.81e-11 | 46 |
megakaryocyte progenitor cell | 1.46e-10 | 6 |
megakaryocyte | 1.46e-10 | 6 |
lymphoid lineage restricted progenitor cell | 4.72e-09 | 12 |
motile cell | 5.71e-09 | 54 |
lymphocyte | 3.17e-08 | 13 |
common lymphoid progenitor | 3.17e-08 | 13 |
myeloid cell | 8.21e-08 | 16 |
T cell | 1.45e-07 | 11 |
pro-T cell | 1.45e-07 | 11 |
megakaryocyte-erythroid progenitor cell | 9.78e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.81e-18 | 48 |
immune system | 4.81e-18 | 48 |
hematopoietic system | 2.78e-16 | 45 |
blood island | 2.78e-16 | 45 |
connective tissue | 1.81e-11 | 46 |
hemopoietic organ | 1.80e-09 | 29 |
immune organ | 1.80e-09 | 29 |
bone marrow | 8.21e-08 | 16 |
mixed endoderm/mesoderm-derived structure | 3.05e-07 | 35 |
lateral plate mesoderm | 7.14e-07 | 87 |