FFCP PHASE1:Mm9::chr9:40231017..40231077,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=320 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:40231017..40231077,- | |||
|description=CAGE_peak_at_chr9:40231017..40231077,- | |description=CAGE_peak_at_chr9:40231017..40231077,- | ||
|id=chr9:40231017..40231077,- | |id=chr9:40231017..40231077,- | ||
|ontology_enrichment_celltype=CL:0000838!5.00e-09!12;CL:0000084!3.14e-08!11;CL:0000827!3.14e-08!11;CL:0000542!6.17e-08!13;CL:0000051!6.17e-08!13 | |ontology_enrichment_celltype=CL:0000838!5.00e-09!12;CL:0000084!3.14e-08!11;CL:0000827!3.14e-08!11;CL:0000542!6.17e-08!13;CL:0000051!6.17e-08!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,9.33e-13,12;CL:0000542,1.28e-11,13;CL:0000051,1.28e-11,13;CL:0002031,2.17e-11,25;CL:0000084,4.91e-11,11;CL:0000827,4.91e-11,11;CL:0000738,2.02e-08,17;CL:0002087,2.02e-08,17;CL:0000988,3.42e-08,32;CL:0002032,3.42e-08,32;CL:0000037,3.42e-08,32;CL:0000837,3.42e-08,32;CL:0000791,1.53e-07,9;CL:0000789,1.53e-07,9;CL:0002420,1.53e-07,9;CL:0002419,1.53e-07,9;CL:0000790,1.53e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.92e-12!29;UBERON:0002193!5.19e-11!48;UBERON:0001007!8.55e-10!128;UBERON:0001555!8.55e-10!128;UBERON:0007026!8.55e-10!128;UBERON:0004119!2.80e-09!130;UBERON:0000925!2.80e-09!130;UBERON:0006595!2.80e-09!130;UBERON:0002390!3.01e-09!45;UBERON:0003061!3.01e-09!45;UBERON:0004921!6.42e-09!126;UBERON:0004185!6.42e-09!126;UBERON:0002370!1.15e-08!23;UBERON:0000974!1.15e-08!23;UBERON:0004807!1.15e-08!23;UBERON:0005058!1.15e-08!23;UBERON:0003351!1.15e-08!23;UBERON:0009113!1.15e-08!23;UBERON:0003295!1.15e-08!23;UBERON:0009722!1.15e-08!23;UBERON:0005562!1.15e-08!23;UBERON:0007690!1.15e-08!23;UBERON:0000065!1.38e-08!41;UBERON:0001004!4.00e-08!42;UBERON:0006562!5.50e-08!24;UBERON:0003408!5.50e-08!24;UBERON:0001557!5.50e-08!24;UBERON:0001042!5.50e-08!24;UBERON:0008814!5.50e-08!24;UBERON:0009145!5.50e-08!24;UBERON:0003104!1.20e-07!131;UBERON:0009142!1.20e-07!131;UBERON:0001041!7.71e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.89e-15,48;UBERON:0002405,4.89e-15,48;UBERON:0004177,4.10e-12,29;UBERON:0005057,4.10e-12,29;UBERON:0002390,1.20e-11,45;UBERON:0003061,1.20e-11,45;UBERON:0000077,2.15e-09,35;UBERON:0003887,4.09e-08,10;UBERON:0002106,1.32e-07,6;UBERON:0004457,1.32e-07,6;UBERON:0000042,1.32e-07,6;UBERON:0004854,1.32e-07,6;UBERON:0009034,1.32e-07,6;UBERON:0002095,1.32e-07,6;UBERON:0004782,1.32e-07,6;UBERON:0003281,1.32e-07,6;UBERON:0009664,1.32e-07,6;UBERON:0002296,1.32e-07,6;UBERON:0005602,1.32e-07,6;UBERON:0001179,1.32e-07,6;UBERON:0006293,1.32e-07,6;UBERON:0002370,4.32e-07,23;UBERON:0000974,4.32e-07,23;UBERON:0004807,4.32e-07,23;UBERON:0005058,4.32e-07,23;UBERON:0003351,4.32e-07,23;UBERON:0009113,4.32e-07,23;UBERON:0003295,4.32e-07,23;UBERON:0009722,4.32e-07,23;UBERON:0005562,4.32e-07,23;UBERON:0007690,4.32e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,3.61545305636414,2.67498572088167,3.7450324211519,0.513653904676515,1.19658238493005,0.684802919724823,0.437102012094987,0.666219523631325,1.61980213911861,0,6.62470547252299,6.99283611389268,8.06340338416257,2.97651515528744,19.3617354841726,14.6271881917804,2.3998863419011,1.60586496747019,0,0,0,0.380046838912748,0.504060259519861,0.665191531965914,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,5.03347818173209,2.90144856804538,5.37750078627942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681535739998656,0,0.289864488701678,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,2.16949371466214,8.80388804400384,1.03909497345377,0,0.304465478312141,0,0.452167921657868,0.352766121407114,0.125666591329675,2.22475470960936,0,2.65383165584962,0.161766849947409,0.220841518460394,0,3.72783522436244,0,0,0.766371165625774,0.239630249011841,0,0.635351135365324,0,0,0,0,0,0,0,0.203678727700633,0.995255764880744,2.77995034277042,1.26265113531884,0,0,0,0,0.0680364991513279,0,0.187403449119458,0.517406741478031,0,0,0,0,0.278047249225598,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0.146199987425332,0.439100230582101,0.134206418760372,0,0,1.98251269790279,0.793351699990633,0,0,0.38660238396628,0.403367049246685,0.22237804384487,0.760902504450237,1.89811624617805,0.164698954724011,0.251335208800269,0.994782360205754,0.38992817423824,0.898819408654221,0.648414149624083,0.796565093017469,0,0.114248512609729,0,0,0,0.280543279561274,0.632365371242573,3.39503340353085,9.57692239832386,4.81248939295022,0,0,0,0,0,0,0,0,0.486405680325106,0.274561413188081,0,1.48856379067401,0.936113019343682,0.252578877947112,0,0,1.84753190166605,0,0,0,0.234690248288502,0.167506257441816,0.476087281772027,0.975668239288994,0.945810864637146,0.664394068946325,0.478364305972461,1.3109065177259,0.518054945597687,2.31438493730419,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0.162886959353576,0.659880491890142,0,0,0,0.565815239267694,0,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,1.03135543248187,0.680879211507576,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,0,2.73393409276564,1.03193433981611,1.48155621895769,0.565105371014073,2.46049609897845,3.20289442489132,0.339956859987711,0.279902904647316,0.690999869022119,0,0,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0.330613822901344,0.26175594198403,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,1.41907650703115,2.46506297195585,0.909445760844565,1.43221356533985,0.79472541912506,0.961563596159751,1.18151621739662,0.504832249740738,1.143102099825,0.302478555410522,1.8516997340553,0.865906574762965,1.28564592399726,0,0,0,0,0,0,0.549454872801795,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0,0.192075457214608,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.376437521661322,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.467863216890817,0.214871054048298,0,0.441182838239031,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0,3.61545305636414,2.67498572088167,3.7450324211519,0.513653904676515,1.19658238493005,0.684802919724823,0.437102012094987,0.666219523631325,1.61980213911861,0,6.62470547252299,6.99283611389268,8.06340338416257,2.97651515528744,19.3617354841726,14.6271881917804,2.3998863419011,1.60586496747019,0,0,0,0.380046838912748,0.504060259519861,0.665191531965914,0,0,0,0,0,0,0,0.7813353445238,0.523523743973798,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,5.03347818173209,2.90144856804538,5.37750078627942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.681535739998656,0,0.289864488701678,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,2.16949371466214,8.80388804400384,1.03909497345377,0,0.304465478312141,0,0.452167921657868,0.352766121407114,0.125666591329675,2.22475470960936,0,2.65383165584962,0.161766849947409,0.220841518460394,0,3.72783522436244,0,0,0.766371165625774,0.239630249011841,0,0.635351135365324,0,0,0,0,0,0,0,0.203678727700633,0.995255764880744,2.77995034277042,1.26265113531884,0,0,0,0,0.0680364991513279,0,0.187403449119458,0.517406741478031,0,0,0,0,0.278047249225598,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0,0,0.146199987425332,0.439100230582101,0.134206418760372,0,0,1.98251269790279,0.793351699990633,0,0,0.38660238396628,0.403367049246685,0.22237804384487,0.760902504450237,1.89811624617805,0.164698954724011,0.251335208800269,0.994782360205754,0.38992817423824,0.898819408654221,0.648414149624083,0.796565093017469,0,0.114248512609729,0,0,0,0.280543279561274,0.632365371242573,3.39503340353085,9.57692239832386,4.81248939295022,0,0,0,0,0,0,0,0,0.486405680325106,0.274561413188081,0,1.48856379067401,0.936113019343682,0.252578877947112,0,0,1.84753190166605,0,0,0,0.234690248288502,0.167506257441816,0.476087281772027,0.975668239288994,0.945810864637146,0.664394068946325,0.478364305972461,1.3109065177259,0.518054945597687,2.31438493730419,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0.162886959353576,0.659880491890142,0,0,0,0.565815239267694,0,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,1.03135543248187,0.680879211507576,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0.582961673259701,0,2.73393409276564,1.03193433981611,1.48155621895769,0.565105371014073,2.46049609897845,3.20289442489132,0.339956859987711,0.279902904647316,0.690999869022119,0,0,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0.330613822901344,0.26175594198403,0.648074866458964,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,1.41907650703115,2.46506297195585,0.909445760844565,1.43221356533985,0.79472541912506,0.961563596159751,1.18151621739662,0.504832249740738,1.143102099825,0.302478555410522,1.8516997340553,0.865906574762965,1.28564592399726,0,0,0,0,0,0,0.549454872801795,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0,0.192075457214608,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.376437521661322,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0.467863216890817,0.214871054048298,0,0.441182838239031,0.695603506861264 | ||
|short_description=p@chr9:40231017..40231077,- | |short_description=p@chr9:40231017..40231077,- | ||
}} | }} |
Latest revision as of 02:01, 5 August 2015
Short description: | p@chr9:40231017..40231077, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:40231017..40231077, - |
Coexpression cluster: | MCL_coexpression_mm9:320 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 9.33e-13 | 12 |
lymphocyte | 1.28e-11 | 13 |
common lymphoid progenitor | 1.28e-11 | 13 |
hematopoietic lineage restricted progenitor cell | 2.17e-11 | 25 |
T cell | 4.91e-11 | 11 |
pro-T cell | 4.91e-11 | 11 |
leukocyte | 2.02e-08 | 17 |
nongranular leukocyte | 2.02e-08 | 17 |
hematopoietic cell | 3.42e-08 | 32 |
hematopoietic oligopotent progenitor cell | 3.42e-08 | 32 |
hematopoietic stem cell | 3.42e-08 | 32 |
hematopoietic multipotent progenitor cell | 3.42e-08 | 32 |
mature alpha-beta T cell | 1.53e-07 | 9 |
alpha-beta T cell | 1.53e-07 | 9 |
immature T cell | 1.53e-07 | 9 |
mature T cell | 1.53e-07 | 9 |
immature alpha-beta T cell | 1.53e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.89e-15 | 48 |
immune system | 4.89e-15 | 48 |
hemopoietic organ | 4.10e-12 | 29 |
immune organ | 4.10e-12 | 29 |
hematopoietic system | 1.20e-11 | 45 |
blood island | 1.20e-11 | 45 |
mixed endoderm/mesoderm-derived structure | 2.15e-09 | 35 |
intraembryonic coelom | 4.09e-08 | 10 |
spleen | 1.32e-07 | 6 |
cavity lining | 1.32e-07 | 6 |
serous membrane | 1.32e-07 | 6 |
gastrointestinal system mesentery | 1.32e-07 | 6 |
stomach region | 1.32e-07 | 6 |
mesentery | 1.32e-07 | 6 |
gastrointestinal system serosa | 1.32e-07 | 6 |
mesentery of stomach | 1.32e-07 | 6 |
gut mesentery | 1.32e-07 | 6 |
dorsal mesentery | 1.32e-07 | 6 |
dorsal mesogastrium | 1.32e-07 | 6 |
peritoneal cavity | 1.32e-07 | 6 |
spleen primordium | 1.32e-07 | 6 |
thymus | 4.32e-07 | 23 |
neck | 4.32e-07 | 23 |
respiratory system epithelium | 4.32e-07 | 23 |
hemolymphoid system gland | 4.32e-07 | 23 |
pharyngeal epithelium | 4.32e-07 | 23 |
thymic region | 4.32e-07 | 23 |
pharyngeal gland | 4.32e-07 | 23 |
entire pharyngeal arch endoderm | 4.32e-07 | 23 |
thymus primordium | 4.32e-07 | 23 |
early pharyngeal endoderm | 4.32e-07 | 23 |