FFCP PHASE1:Mm9::chr9:40130999..40131043,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=468|UniProt=|association_with_transcript=0bp_to_ENSMUST00000140807_5end|description=CAGE_peak_1_at_ENSMUST00000140807_5end|id=chr9:40130999..40131043,+|ontology_enrichment_celltype=CL:0002563!1.69e-09!9;CL:0002251!1.69e-09!9;CL:0000239!3.13e-07!6;CL:0000677!3.13e-07!6;CL:0000212!3.13e-07!6;CL:0000584!3.13e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,2.76e-14,9;CL:0002251,2.76e-14,9;CL:0000239,1.17e-10,6;CL:0000677,1.17e-10,6;CL:0000584,1.17e-10,6;CL:0000075,5.55e-09,7;CL:0000066,1.57e-08,25;CL:0002076,9.97e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!3.20e-39!59;UBERON:0000160!1.13e-36!43;UBERON:0001007!9.48e-26!128;UBERON:0001555!9.48e-26!128;UBERON:0007026!9.48e-26!128;UBERON:0004119!5.86e-25!130;UBERON:0000925!5.86e-25!130;UBERON:0006595!5.86e-25!130;UBERON:0004921!4.67e-24!126;UBERON:0004185!4.67e-24!126;UBERON:0000344!4.30e-14!15;UBERON:0002108!1.08e-13!16;UBERON:0001242!2.59e-12!13;UBERON:0000060!2.59e-12!13;UBERON:0001262!2.59e-12!13;UBERON:0004786!2.59e-12!13;UBERON:0001045!7.23e-11!13;UBERON:0001264!4.16e-10!12;UBERON:0003922!4.16e-10!12;UBERON:0002114!4.16e-10!12;UBERON:0003923!4.16e-10!12;UBERON:0003924!4.16e-10!12;UBERON:0003921!4.16e-10!12;UBERON:0003350!1.69e-09!9;UBERON:0004808!1.69e-09!9;UBERON:0001277!1.69e-09!9;UBERON:0000485!3.17e-07!11;UBERON:0004923!8.38e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0005409,8.31e-40,47;UBERON:0000160,1.27e-35,31;UBERON:0000344,1.57e-19,15;UBERON:0001242,1.08e-16,13;UBERON:0001262,1.08e-16,13;UBERON:0004786,1.08e-16,13;UBERON:0001007,1.81e-15,116;UBERON:0001555,1.81e-15,116;UBERON:0007026,1.81e-15,116;UBERON:0001264,2.93e-15,12;UBERON:0004119,5.14e-15,118;UBERON:0000925,5.14e-15,118;UBERON:0006595,5.14e-15,118;UBERON:0003350,2.76e-14,9;UBERON:0004808,2.76e-14,9;UBERON:0001277,2.76e-14,9;UBERON:0004921,9.28e-14,114;UBERON:0000485,2.70e-11,11;UBERON:0004923,9.58e-11,24;UBERON:0002075,1.32e-08,19;UBERON:0002108,3.03e-07,4|phase1_expression=0,14.3079917132138,9.09998478779072,8.77146212789807,6.51164448930251,16.9558064631009,10.2789561862031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.47959840805055,6.8822784320151,4.59385571292016,6.03066794622705,9.9116767035509,4.94060890586572,7.30887376303799,8.86922042621219,0,0,0,6.64358725427932,3.15845826181135,6.73758875665818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53647670624362,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0.330418782983798,1.32225283331772,0.426576501070468,0.464473343720877,2.19074684247559,4.23535401709019,3.11329261382818,3.99473814836374,4.74529061544512,7.5761519173045,7.03738584640755,11.7384318504279,11.307917052909,17.0775687644302,10.8069024937347,12.7450414882795,0,0,0,0,0,0,0,0,0,0,0,0.500535317148282,0.589676985339609,0.449724224769707,0.202860121388503,0.72353147925725,0,1.15078454980324,0.648540907100142,0.823684239564244,1.43768206527355,0.744281895337007,0.936113019343682,1.01031551178845,0.179397413521912,0.964887042726734,0,0,0,0,0.234690248288502,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65490276679926,2.91336763385978,3.93020624054176,6.60117779145643,2.65771703592696,2.76691633149535,8.01127708821486,6.18007340111759,1.42598951353889,6.0046984007805,8.4334886859999,4.12542172992747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8655226681224,0,0,0,0,0,0,0,0,0,0,18.1387417422872,1.73984796469624,2.43983360552218,3.56417624711944,3.55450103224597,6.11415178489297,7.8221320903196,11.4061768900964,24.6050585464988,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0.188626341386076,0,0.192075457214608,0.287177344778066,0.476293691283074,0.115884325944855,0,0.824171801606613,0.294397840268795,0,0.354951612318675,0,0,0.0941093804153306,0.338458431566706,0,0.526139422875686,0.407412341537585,0.561142271657738,0.237270036248348,0.29551344712669,0,0.619747364743864,0.192906610981141,0,0.233931608445408,1.50409737833809,0,0,0|short_description=p1@ENSMUST00000140807}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=468 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000140807_5end | |||
|cluster_id=chr9:40130999..40131043,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000140807_5end | |||
|id=chr9:40130999..40131043,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.69e-09!9;CL:0002251!1.69e-09!9;CL:0000239!3.13e-07!6;CL:0000677!3.13e-07!6;CL:0000212!3.13e-07!6;CL:0000584!3.13e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.76e-14,9;CL:0002251,2.76e-14,9;CL:0000239,1.17e-10,6;CL:0000677,1.17e-10,6;CL:0000584,1.17e-10,6;CL:0000075,5.55e-09,7;CL:0000066,1.57e-08,25;CL:0002076,9.97e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.20e-39!59;UBERON:0000160!1.13e-36!43;UBERON:0001007!9.48e-26!128;UBERON:0001555!9.48e-26!128;UBERON:0007026!9.48e-26!128;UBERON:0004119!5.86e-25!130;UBERON:0000925!5.86e-25!130;UBERON:0006595!5.86e-25!130;UBERON:0004921!4.67e-24!126;UBERON:0004185!4.67e-24!126;UBERON:0000344!4.30e-14!15;UBERON:0002108!1.08e-13!16;UBERON:0001242!2.59e-12!13;UBERON:0000060!2.59e-12!13;UBERON:0001262!2.59e-12!13;UBERON:0004786!2.59e-12!13;UBERON:0001045!7.23e-11!13;UBERON:0001264!4.16e-10!12;UBERON:0003922!4.16e-10!12;UBERON:0002114!4.16e-10!12;UBERON:0003923!4.16e-10!12;UBERON:0003924!4.16e-10!12;UBERON:0003921!4.16e-10!12;UBERON:0003350!1.69e-09!9;UBERON:0004808!1.69e-09!9;UBERON:0001277!1.69e-09!9;UBERON:0000485!3.17e-07!11;UBERON:0004923!8.38e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,8.31e-40,47;UBERON:0000160,1.27e-35,31;UBERON:0000344,1.57e-19,15;UBERON:0001242,1.08e-16,13;UBERON:0001262,1.08e-16,13;UBERON:0004786,1.08e-16,13;UBERON:0001007,1.81e-15,116;UBERON:0001555,1.81e-15,116;UBERON:0007026,1.81e-15,116;UBERON:0001264,2.93e-15,12;UBERON:0004119,5.14e-15,118;UBERON:0000925,5.14e-15,118;UBERON:0006595,5.14e-15,118;UBERON:0003350,2.76e-14,9;UBERON:0004808,2.76e-14,9;UBERON:0001277,2.76e-14,9;UBERON:0004921,9.28e-14,114;UBERON:0000485,2.70e-11,11;UBERON:0004923,9.58e-11,24;UBERON:0002075,1.32e-08,19;UBERON:0002108,3.03e-07,4 | |||
|phase1_expression=0,14.3079917132138,9.09998478779072,8.77146212789807,6.51164448930251,16.9558064631009,10.2789561862031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.47959840805055,6.8822784320151,4.59385571292016,6.03066794622705,9.9116767035509,4.94060890586572,7.30887376303799,8.86922042621219,0,0,0,6.64358725427932,3.15845826181135,6.73758875665818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53647670624362,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,5.59175283654366,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0.330418782983798,1.32225283331772,0.426576501070468,0.464473343720877,2.19074684247559,4.23535401709019,3.11329261382818,3.99473814836374,4.74529061544512,7.5761519173045,7.03738584640755,11.7384318504279,11.307917052909,17.0775687644302,10.8069024937347,12.7450414882795,0,0,0,0,0,0,0,0,0,0,0,0.500535317148282,0.589676985339609,0.449724224769707,0.202860121388503,0.72353147925725,0,1.15078454980324,0.648540907100142,0.823684239564244,1.43768206527355,0.744281895337007,0.936113019343682,1.01031551178845,0.179397413521912,0.964887042726734,0,0,0,0,0.234690248288502,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65490276679926,2.91336763385978,3.93020624054176,6.60117779145643,2.65771703592696,2.76691633149535,8.01127708821486,6.18007340111759,1.42598951353889,6.0046984007805,8.4334886859999,4.12542172992747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8655226681224,0,0,0,0,0,0,0,0,0,0,18.1387417422872,1.73984796469624,2.43983360552218,3.56417624711944,3.55450103224597,6.11415178489297,7.8221320903196,11.4061768900964,24.6050585464988,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0.505394423527595,0.25347929989024,0.188626341386076,0,0.192075457214608,0.287177344778066,0.476293691283074,0.115884325944855,0,0.824171801606613,0.294397840268795,0,0.354951612318675,0,0,0.0941093804153306,0.338458431566706,0,0.526139422875686,0.407412341537585,0.561142271657738,0.237270036248348,0.29551344712669,0,0.619747364743864,0.192906610981141,0,0.233931608445408,1.50409737833809,0,0,0 | |||
|short_description=p1@ENSMUST00000140807 | |||
}} |
Latest revision as of 01:54, 5 August 2015
Short description: | p1@ENSMUST00000140807 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000140807_5end |
Coexpression cluster: | MCL_coexpression_mm9:468 |
Association with transcript: | 0bp_to_ENSMUST00000140807_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.76e-14 | 9 |
epithelial cell of alimentary canal | 2.76e-14 | 9 |
brush border epithelial cell | 1.17e-10 | 6 |
gut absorptive cell | 1.17e-10 | 6 |
enterocyte | 1.17e-10 | 6 |
columnar/cuboidal epithelial cell | 5.55e-09 | 7 |
epithelial cell | 1.57e-08 | 25 |
endo-epithelial cell | 9.97e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 8.31e-40 | 47 |
intestine | 1.27e-35 | 31 |
mucosa | 1.57e-19 | 15 |
intestinal mucosa | 1.08e-16 | 13 |
wall of intestine | 1.08e-16 | 13 |
gastrointestinal system mucosa | 1.08e-16 | 13 |
digestive system | 1.81e-15 | 116 |
digestive tract | 1.81e-15 | 116 |
primitive gut | 1.81e-15 | 116 |
pancreas | 2.93e-15 | 12 |
endoderm-derived structure | 5.14e-15 | 118 |
endoderm | 5.14e-15 | 118 |
presumptive endoderm | 5.14e-15 | 118 |
epithelium of mucosa | 2.76e-14 | 9 |
gastrointestinal system epithelium | 2.76e-14 | 9 |
intestinal epithelium | 2.76e-14 | 9 |
subdivision of digestive tract | 9.28e-14 | 114 |
simple columnar epithelium | 2.70e-11 | 11 |
organ component layer | 9.58e-11 | 24 |
viscus | 1.32e-08 | 19 |
small intestine | 3.03e-07 | 4 |