FFCP PHASE1:Mm9::chr10:93498194..93498216,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:93498194..93498216,+ | |||
|description=CAGE_peak_at_chr10:93498194..93498216,+ | |description=CAGE_peak_at_chr10:93498194..93498216,+ | ||
|id=chr10:93498194..93498216,+ | |id=chr10:93498194..93498216,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,9.67e-17,6;CL:0000677,9.67e-17,6;CL:0000584,9.67e-17,6;CL:0000075,2.57e-14,7;CL:0000066,5.00e-14,25;CL:0000682,2.77e-12,3;CL:0002563,4.46e-11,9;CL:0002251,4.46e-11,9;CL:0000223,8.12e-09,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.79e-09!15;UBERON:0000160!3.17e-09!43;UBERON:0001242!7.44e-08!13;UBERON:0000060!7.44e-08!13;UBERON:0001262!7.44e-08!13;UBERON:0004786!7.44e-08!13;UBERON:0005409!4.83e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.74e-24,15;UBERON:0001242,2.35e-18,13;UBERON:0001262,2.35e-18,13;UBERON:0004786,2.35e-18,13;UBERON:0000160,1.27e-15,31;UBERON:0004923,1.14e-14,24;UBERON:0003350,4.46e-11,9;UBERON:0004808,4.46e-11,9;UBERON:0001277,4.46e-11,9;UBERON:0005409,1.45e-09,47;UBERON:0000485,5.20e-09,11;UBERON:0002108,6.10e-09,4;UBERON:0001962,1.50e-08,2;UBERON:0001961,1.50e-08,2;UBERON:0001744,1.50e-08,2;UBERON:0001007,2.63e-07,116;UBERON:0001555,2.63e-07,116;UBERON:0007026,2.63e-07,116;UBERON:0004119,3.98e-07,118;UBERON:0000925,3.98e-07,118;UBERON:0006595,3.98e-07,118 | |||
|phase1_expression=0,7.32848356042658,5.0049916332849,14.5182821427278,13.023288978605,0.503637815735669,1.63528848416868,0,0.140788722151667,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0,0,0,1.75991665072747,2.2940928106717,1.72269589234506,4.73838195774982,3.01659725760245,0.950117097281869,1.51218077855958,1.77384408524244,0,0.61506478758457,0,0.288851619751275,0,0,0,0,0,0.588231488031014,0,0,0,0,0,1.56478268869608,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6087803983151,0,0.679971333707751,1.07940638327563,0,0,0,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.34255163915718,0.776813650941515,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0,1.02182822083437,0.239630249011841,0,0.254140454146129,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,1.05220927943237,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,4.95628174475697,1.58670339998127,0,0,0,0.605050573870028,0,0.380451252225118,0.474529061544512,0.494096864172033,0.251335208800269,0.397912944082302,0.38992817423824,0.898819408654221,0.648414149624083,1.1948476395262,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.280543279561274,0.126473074248515,0.147610147979602,0,0,0.889357881261447,0,0,0,0.202860121388503,0,0.25462585178142,0.863088412352432,1.13494658742525,0.274561413188081,2.87536413054709,0.372140947668503,0.936113019343682,0.505157755894224,0.358794827043824,0,0,0,0,0,0,0,0,0.195133647857799,0.315270288212382,0.221464689648775,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0.258428293168221,0.727067458955011,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,0.354680467284547,0.178368817602071,0,0,0.23467170806371,0.42366414172764,0,0,0.645857706783622,0.120625849856312,0.358117032009409,0.164140899745061,2.04036585640896,0,0,0,0,0,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0,0.134864346384821,0.247960367176008,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0.116876902181569,0,0.221985953374065,0.358855426437903,0.839423081820392,0,0.187682475451182,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.231768651889711,0,0,0,0.685738504770831,0.177475806159338,0.476872379894642,0,0.282328141245992,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0.355905054372522,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0.429742108096597,0,0,0 | |phase1_expression=0,7.32848356042658,5.0049916332849,14.5182821427278,13.023288978605,0.503637815735669,1.63528848416868,0,0.140788722151667,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0,0,0,1.75991665072747,2.2940928106717,1.72269589234506,4.73838195774982,3.01659725760245,0.950117097281869,1.51218077855958,1.77384408524244,0,0.61506478758457,0,0.288851619751275,0,0,0,0,0,0.588231488031014,0,0,0,0,0,1.56478268869608,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0.677689064138264,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6087803983151,0,0.679971333707751,1.07940638327563,0,0,0,0.170430322578058,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.34255163915718,0.776813650941515,0,0,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0,1.02182822083437,0.239630249011841,0,0.254140454146129,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,1.05220927943237,0,0,0.180062129805349,0,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0.348252166522167,0,0,0,0,0.284163499395593,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,4.95628174475697,1.58670339998127,0,0,0,0.605050573870028,0,0.380451252225118,0.474529061544512,0.494096864172033,0.251335208800269,0.397912944082302,0.38992817423824,0.898819408654221,0.648414149624083,1.1948476395262,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.280543279561274,0.126473074248515,0.147610147979602,0,0,0.889357881261447,0,0,0,0.202860121388503,0,0.25462585178142,0.863088412352432,1.13494658742525,0.274561413188081,2.87536413054709,0.372140947668503,0.936113019343682,0.505157755894224,0.358794827043824,0,0,0,0,0,0,0,0,0.195133647857799,0.315270288212382,0.221464689648775,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0.258428293168221,0.727067458955011,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,0.354680467284547,0.178368817602071,0,0,0.23467170806371,0.42366414172764,0,0,0.645857706783622,0.120625849856312,0.358117032009409,0.164140899745061,2.04036585640896,0,0,0,0,0,0,0,0.339956859987711,0.279902904647316,0.138199973804424,0,0,0.203319467126849,0.108005340821801,0.418176592028937,0,0.134864346384821,0.247960367176008,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0.0962118416403295,0.116876902181569,0,0.221985953374065,0.358855426437903,0.839423081820392,0,0.187682475451182,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0,0.128050304809739,0.0574354689556133,0,0.231768651889711,0,0,0,0.685738504770831,0.177475806159338,0.476872379894642,0,0.282328141245992,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0.355905054372522,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0,0.429742108096597,0,0,0 | ||
|short_description=p@chr10:93498194..93498216,+ | |short_description=p@chr10:93498194..93498216,+ | ||
}} | }} |
Latest revision as of 01:16, 5 August 2015
Short description: | p@chr10:93498194..93498216, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:93498194..93498216, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.67e-17 | 6 |
gut absorptive cell | 9.67e-17 | 6 |
enterocyte | 9.67e-17 | 6 |
columnar/cuboidal epithelial cell | 2.57e-14 | 7 |
epithelial cell | 5.00e-14 | 25 |
M cell of gut | 2.77e-12 | 3 |
intestinal epithelial cell | 4.46e-11 | 9 |
epithelial cell of alimentary canal | 4.46e-11 | 9 |
endodermal cell | 8.12e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.74e-24 | 15 |
intestinal mucosa | 2.35e-18 | 13 |
wall of intestine | 2.35e-18 | 13 |
gastrointestinal system mucosa | 2.35e-18 | 13 |
intestine | 1.27e-15 | 31 |
organ component layer | 1.14e-14 | 24 |
epithelium of mucosa | 4.46e-11 | 9 |
gastrointestinal system epithelium | 4.46e-11 | 9 |
intestinal epithelium | 4.46e-11 | 9 |
gastrointestinal system | 1.45e-09 | 47 |
simple columnar epithelium | 5.20e-09 | 11 |
small intestine | 6.10e-09 | 4 |
gut-associated lymphoid tissue | 1.50e-08 | 2 |
mucosa-associated lymphoid tissue | 1.50e-08 | 2 |
lymphoid tissue | 1.50e-08 | 2 |
digestive system | 2.63e-07 | 116 |
digestive tract | 2.63e-07 | 116 |
primitive gut | 2.63e-07 | 116 |
endoderm-derived structure | 3.98e-07 | 118 |
endoderm | 3.98e-07 | 118 |
presumptive endoderm | 3.98e-07 | 118 |