FFCP PHASE1:Mm9::chr4:135728860..135728871,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=411 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:135728860..135728871,+ | |||
|description=CAGE_peak_at_chr4:135728860..135728871,+ | |description=CAGE_peak_at_chr4:135728860..135728871,+ | ||
|id=chr4:135728860..135728871,+ | |id=chr4:135728860..135728871,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002027,1.82e-10,3;CL:0002006,1.82e-10,3;CL:0002024,1.82e-10,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.06e-11,3;DOID:4045,1.06e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.65e-09!29;UBERON:0005057!1.80e-09!51;UBERON:0002405!2.36e-08!70;UBERON:0002390!1.69e-07!45;UBERON:0003061!1.69e-07!45;UBERON:0002193!2.23e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.62e-11,48;UBERON:0002405,6.62e-11,48;UBERON:0002390,4.20e-10,45;UBERON:0003061,4.20e-10,45;UBERON:0004177,7.09e-10,29;UBERON:0005057,7.09e-10,29;UBERON:0002106,6.25e-09,6;UBERON:0004457,6.25e-09,6;UBERON:0000042,6.25e-09,6;UBERON:0004854,6.25e-09,6;UBERON:0009034,6.25e-09,6;UBERON:0002095,6.25e-09,6;UBERON:0004782,6.25e-09,6;UBERON:0003281,6.25e-09,6;UBERON:0009664,6.25e-09,6;UBERON:0002296,6.25e-09,6;UBERON:0005602,6.25e-09,6;UBERON:0001179,6.25e-09,6;UBERON:0006293,6.25e-09,6;UBERON:0000077,6.72e-08,35;UBERON:0000490,9.15e-08,66;UBERON:0001041,9.62e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0.171200729931206,0.34968160967599,1.33243904726265,1.21485160433896,1.39912375625629,0.315462165358238,0.274228867211478,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,1.5626706890476,5.75876118371178,4.70585190424811,3.41522742479223,4.36959317728038,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0.148442139064825,0,0,0.230615497256059,0,0.23517741427141,0,0,0,3.5384422077995,0.161766849947409,0.883366073841574,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0.229902104433473,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0.432276099749388,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0.83422552858047,0.982794975566015,2.47348323623339,1.82574109249653,1.68824011826692,2.03700681425136,1.43848068725405,0.648540907100142,0.549122826376163,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.335012514883631,0,0.390267295715598,0.157635144106191,0.44292937929755,0.318909537314974,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0.180938774784468,0.119372344003136,0.328281799490123,0.291480836629851,0,1.02522528478712,0,1.29636169158798,1.13021074202815,1.91371918809435,0.915112692826091,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0.205421914329655,0.129920822977795,0.537080087002444,0.993406773906324,0.721172697119813,0.738447635872886,0.908698049533329,1.21930890648,1.31074040677893,2.0466154955348,1.73181314952593,1.28564592399726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.243106717068294,0.838452650511929,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0,0,0.320125762024346,0.114870937911227,0,0.347652977834566,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0.715308569841963,0,0.282328141245992,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0,0,0.464810523557898,0.192906610981141,0.249810577937946,0,0.429742108096597,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0.171200729931206,0.34968160967599,1.33243904726265,1.21485160433896,1.39912375625629,0.315462165358238,0.274228867211478,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,1.5626706890476,5.75876118371178,4.70585190424811,3.41522742479223,4.36959317728038,0,0,0,0,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0.148442139064825,0,0,0.230615497256059,0,0.23517741427141,0,0,0,3.5384422077995,0.161766849947409,0.883366073841574,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0.229902104433473,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0.219195732427575,0.556094498451196,0.348252166522167,0,0,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0.308534225774757,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0.19496408711912,0,0.432276099749388,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0.83422552858047,0.982794975566015,2.47348323623339,1.82574109249653,1.68824011826692,2.03700681425136,1.43848068725405,0.648540907100142,0.549122826376163,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.335012514883631,0,0.390267295715598,0.157635144106191,0.44292937929755,0.318909537314974,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0.180938774784468,0.119372344003136,0.328281799490123,0.291480836629851,0,1.02522528478712,0,1.29636169158798,1.13021074202815,1.91371918809435,0.915112692826091,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0.205421914329655,0.129920822977795,0.537080087002444,0.993406773906324,0.721172697119813,0.738447635872886,0.908698049533329,1.21930890648,1.31074040677893,2.0466154955348,1.73181314952593,1.28564592399726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0.243106717068294,0.838452650511929,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0,0,0.320125762024346,0.114870937911227,0,0.347652977834566,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0.715308569841963,0,0.282328141245992,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0,0,0.464810523557898,0.192906610981141,0.249810577937946,0,0.429742108096597,0,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr4:135728860..135728871,+ | |short_description=p@chr4:135728860..135728871,+ | ||
}} | }} |
Latest revision as of 23:31, 4 August 2015
Short description: | p@chr4:135728860..135728871, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:135728860..135728871, + |
Coexpression cluster: | MCL_coexpression_mm9:411 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 1.82e-10 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.82e-10 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.82e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.62e-11 | 48 |
immune system | 6.62e-11 | 48 |
hematopoietic system | 4.20e-10 | 45 |
blood island | 4.20e-10 | 45 |
hemopoietic organ | 7.09e-10 | 29 |
immune organ | 7.09e-10 | 29 |
spleen | 6.25e-09 | 6 |
cavity lining | 6.25e-09 | 6 |
serous membrane | 6.25e-09 | 6 |
gastrointestinal system mesentery | 6.25e-09 | 6 |
stomach region | 6.25e-09 | 6 |
mesentery | 6.25e-09 | 6 |
gastrointestinal system serosa | 6.25e-09 | 6 |
mesentery of stomach | 6.25e-09 | 6 |
gut mesentery | 6.25e-09 | 6 |
dorsal mesentery | 6.25e-09 | 6 |
dorsal mesogastrium | 6.25e-09 | 6 |
peritoneal cavity | 6.25e-09 | 6 |
spleen primordium | 6.25e-09 | 6 |
mixed endoderm/mesoderm-derived structure | 6.72e-08 | 35 |
unilaminar epithelium | 9.15e-08 | 66 |
foregut | 9.62e-07 | 80 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.06e-11 | 3 |
muscle cancer | 1.06e-11 | 3 |