FFCP PHASE1:Mm9::chr4:133616654..133616663,+: Difference between revisions
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|id=chr4:133616654..133616663,+
|short_description=p@chr4:133616654..133616663,+
|description=CAGE_peak_at_chr4:133616654..133616663,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=468 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:133616654..133616663,+ | |||
|description=CAGE_peak_at_chr4:133616654..133616663,+ | |||
|id=chr4:133616654..133616663,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.99e-10!6;CL:0000677!1.99e-10!6;CL:0000212!1.99e-10!6;CL:0000584!1.99e-10!6;CL:0002563!2.50e-09!9;CL:0002251!2.50e-09!9;CL:0000075!7.23e-09!7;CL:0000473!1.92e-08!3;CL:0000627!1.92e-08!3;CL:0000682!1.92e-08!3;CL:0000066!6.03e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,9.40e-25,3;CL:0000239,8.22e-22,6;CL:0000677,8.22e-22,6;CL:0000584,8.22e-22,6;CL:0000075,9.31e-19,7;CL:0000066,1.82e-15,25;CL:0002563,1.12e-14,9;CL:0002251,1.12e-14,9;CL:0000473,5.38e-11,7;CL:0002076,6.25e-09,15;CL:0000223,9.31e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.47e-23!43;UBERON:0005409!1.98e-22!59;UBERON:0000344!6.05e-21!15;UBERON:0001242!5.66e-17!13;UBERON:0000060!5.66e-17!13;UBERON:0001262!5.66e-17!13;UBERON:0004786!5.66e-17!13;UBERON:0004923!5.01e-12!24;UBERON:0001007!2.40e-11!128;UBERON:0001555!2.40e-11!128;UBERON:0007026!2.40e-11!128;UBERON:0004119!4.65e-11!130;UBERON:0000925!4.65e-11!130;UBERON:0006595!4.65e-11!130;UBERON:0004921!1.30e-09!126;UBERON:0004185!1.30e-09!126;UBERON:0003350!2.50e-09!9;UBERON:0004808!2.50e-09!9;UBERON:0001277!2.50e-09!9;UBERON:0000331!9.53e-08!3;UBERON:0002116!9.53e-08!3;UBERON:0001204!9.53e-08!3;UBERON:0001168!9.53e-08!3;UBERON:0000485!1.75e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.36e-19,15;UBERON:0001242,1.80e-15,13;UBERON:0001262,1.80e-15,13;UBERON:0004786,1.80e-15,13;UBERON:0003350,1.12e-14,9;UBERON:0004808,1.12e-14,9;UBERON:0001277,1.12e-14,9;UBERON:0000485,4.53e-12,11;UBERON:0004923,8.73e-12,24;UBERON:0000160,3.97e-09,31;UBERON:0005409,5.14e-08,47 | |||
|phase1_expression=0,1.74487703819681,0.454999239389536,0,1.00179145989269,2.51818907867835,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,0.45881856213434,1.14846392823004,2.15380998079537,1.29282739611533,1.14014051673824,0.756090389279792,0.665191531965914,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.793351699990633,0,0,0,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.795825888164603,0.19496408711912,0.898819408654221,0.432276099749388,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0.134864346384821,0,0.523511883968059,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.74487703819681,0.454999239389536,0,1.00179145989269,2.51818907867835,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,0.45881856213434,1.14846392823004,2.15380998079537,1.29282739611533,1.14014051673824,0.756090389279792,0.665191531965914,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.793351699990633,0,0,0,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0.251335208800269,0.795825888164603,0.19496408711912,0.898819408654221,0.432276099749388,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0.134864346384821,0,0.523511883968059,0.90730481304255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:133616654..133616663,+ | |||
}} | }} |
Latest revision as of 22:17, 4 August 2015
Short description: | p@chr4:133616654..133616663, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:133616654..133616663, + |
Coexpression cluster: | MCL_coexpression_mm9:468 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 9.40e-25 | 3 |
brush border epithelial cell | 8.22e-22 | 6 |
gut absorptive cell | 8.22e-22 | 6 |
enterocyte | 8.22e-22 | 6 |
columnar/cuboidal epithelial cell | 9.31e-19 | 7 |
epithelial cell | 1.82e-15 | 25 |
intestinal epithelial cell | 1.12e-14 | 9 |
epithelial cell of alimentary canal | 1.12e-14 | 9 |
defensive cell | 5.38e-11 | 7 |
endo-epithelial cell | 6.25e-09 | 15 |
endodermal cell | 9.31e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.36e-19 | 15 |
intestinal mucosa | 1.80e-15 | 13 |
wall of intestine | 1.80e-15 | 13 |
gastrointestinal system mucosa | 1.80e-15 | 13 |
epithelium of mucosa | 1.12e-14 | 9 |
gastrointestinal system epithelium | 1.12e-14 | 9 |
intestinal epithelium | 1.12e-14 | 9 |
simple columnar epithelium | 4.53e-12 | 11 |
organ component layer | 8.73e-12 | 24 |
intestine | 3.97e-09 | 31 |
gastrointestinal system | 5.14e-08 | 47 |