FFCP PHASE1:Mm9::chr7:28860314..28860321,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=273|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:28860314..28860321,+|id=chr7:28860314..28860321,+|ontology_enrichment_celltype=CL:0000473!5.76e-09!3;CL:0000627!5.76e-09!3;CL:0000682!5.76e-09!3;CL:0000239!8.45e-08!6;CL:0000677!8.45e-08!6;CL:0000212!8.45e-08!6;CL:0000584!8.45e-08!6;CL:0002563!1.33e-07!9;CL:0002251!1.33e-07!9|ontology_enrichment_celltype_v019_2=CL:0000239,1.12e-07,6;CL:0000677,1.12e-07,6;CL:0000584,1.12e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.33e-28!43;UBERON:0005409!3.77e-21!59;UBERON:0000344!1.90e-20!15;UBERON:0001242!3.24e-16!13;UBERON:0000060!3.24e-16!13;UBERON:0001262!3.24e-16!13;UBERON:0004786!3.24e-16!13;UBERON:0004923!6.78e-12!24;UBERON:0000331!1.47e-09!3;UBERON:0002116!1.47e-09!3;UBERON:0001204!1.47e-09!3;UBERON:0001168!1.47e-09!3;UBERON:0001007!1.79e-09!128;UBERON:0001555!1.79e-09!128;UBERON:0007026!1.79e-09!128;UBERON:0004119!3.08e-09!130;UBERON:0000925!3.08e-09!130;UBERON:0006595!3.08e-09!130;UBERON:0004921!7.71e-08!126;UBERON:0004185!7.71e-08!126;UBERON:0003350!1.33e-07!9;UBERON:0004808!1.33e-07!9;UBERON:0001277!1.33e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002108,3.79e-39,4;UBERON:0000331,5.70e-30,3;UBERON:0002116,5.70e-30,3;UBERON:0001204,5.70e-30,3;UBERON:0001168,5.70e-30,3;UBERON:0000344,1.43e-23,15;UBERON:0001242,3.12e-19,13;UBERON:0001262,3.12e-19,13;UBERON:0004786,3.12e-19,13;UBERON:0000160,2.00e-15,31;UBERON:0004923,9.22e-15,24;UBERON:0003199,8.99e-11,1;UBERON:0005409,4.01e-10,47|phase1_expression=0,0,0.909998478779072,0.30246421130683,0,5.03637815735669,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,1.14704640533585,0.57423196411502,0.86152399231815,1.07735616342945,2.66032787238923,2.26827116783938,1.33038306393183,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.19496408711912,1.79763881730844,0.648414149624083,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:28860314..28860321,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=273 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:28860314..28860321,+ | |||
|description=CAGE_peak_at_chr7:28860314..28860321,+ | |||
|id=chr7:28860314..28860321,+ | |||
|ontology_enrichment_celltype=CL:0000473!5.76e-09!3;CL:0000627!5.76e-09!3;CL:0000682!5.76e-09!3;CL:0000239!8.45e-08!6;CL:0000677!8.45e-08!6;CL:0000212!8.45e-08!6;CL:0000584!8.45e-08!6;CL:0002563!1.33e-07!9;CL:0002251!1.33e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.12e-07,6;CL:0000677,1.12e-07,6;CL:0000584,1.12e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.33e-28!43;UBERON:0005409!3.77e-21!59;UBERON:0000344!1.90e-20!15;UBERON:0001242!3.24e-16!13;UBERON:0000060!3.24e-16!13;UBERON:0001262!3.24e-16!13;UBERON:0004786!3.24e-16!13;UBERON:0004923!6.78e-12!24;UBERON:0000331!1.47e-09!3;UBERON:0002116!1.47e-09!3;UBERON:0001204!1.47e-09!3;UBERON:0001168!1.47e-09!3;UBERON:0001007!1.79e-09!128;UBERON:0001555!1.79e-09!128;UBERON:0007026!1.79e-09!128;UBERON:0004119!3.08e-09!130;UBERON:0000925!3.08e-09!130;UBERON:0006595!3.08e-09!130;UBERON:0004921!7.71e-08!126;UBERON:0004185!7.71e-08!126;UBERON:0003350!1.33e-07!9;UBERON:0004808!1.33e-07!9;UBERON:0001277!1.33e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,3.79e-39,4;UBERON:0000331,5.70e-30,3;UBERON:0002116,5.70e-30,3;UBERON:0001204,5.70e-30,3;UBERON:0001168,5.70e-30,3;UBERON:0000344,1.43e-23,15;UBERON:0001242,3.12e-19,13;UBERON:0001262,3.12e-19,13;UBERON:0004786,3.12e-19,13;UBERON:0000160,2.00e-15,31;UBERON:0004923,9.22e-15,24;UBERON:0003199,8.99e-11,1;UBERON:0005409,4.01e-10,47 | |||
|phase1_expression=0,0,0.909998478779072,0.30246421130683,0,5.03637815735669,4.43864017131499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,1.14704640533585,0.57423196411502,0.86152399231815,1.07735616342945,2.66032787238923,2.26827116783938,1.33038306393183,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.19496408711912,1.79763881730844,0.648414149624083,0.199141273254367,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:28860314..28860321,+ | |||
}} |
Latest revision as of 22:07, 4 August 2015
Short description: | p@chr7:28860314..28860321, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:28860314..28860321, + |
Coexpression cluster: | MCL_coexpression_mm9:273 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.12e-07 | 6 |
gut absorptive cell | 1.12e-07 | 6 |
enterocyte | 1.12e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
small intestine | 3.79e-39 | 4 |
ileal mucosa | 5.70e-30 | 3 |
ileum | 5.70e-30 | 3 |
mucosa of small intestine | 5.70e-30 | 3 |
wall of small intestine | 5.70e-30 | 3 |
mucosa | 1.43e-23 | 15 |
intestinal mucosa | 3.12e-19 | 13 |
wall of intestine | 3.12e-19 | 13 |
gastrointestinal system mucosa | 3.12e-19 | 13 |
intestine | 2.00e-15 | 31 |
organ component layer | 9.22e-15 | 24 |
egg chamber | 8.99e-11 | 1 |
gastrointestinal system | 4.01e-10 | 47 |