FFCP PHASE1:Mm9::chr14:80421229..80421237,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:80421229..80421237,+ | |||
|description=CAGE_peak_at_chr14:80421229..80421237,+ | |description=CAGE_peak_at_chr14:80421229..80421237,+ | ||
|id=chr14:80421229..80421237,+ | |id=chr14:80421229..80421237,+ | ||
|ontology_enrichment_celltype=CL:0002250!1.15e-12!3;CL:0002563!9.11e-11!9;CL:0002251!9.11e-11!9 | |ontology_enrichment_celltype=CL:0002250!1.15e-12!3;CL:0002563!9.11e-11!9;CL:0002251!9.11e-11!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.17e-38,3;CL:0002563,8.62e-23,9;CL:0002251,8.62e-23,9;CL:0002076,6.59e-14,15;CL:0000223,1.48e-10,20;CL:0000066,1.56e-08,25 | |||
|ontology_enrichment_disease=DOID:0060100!3.81e-12!3;DOID:4045!3.81e-12!3 | |ontology_enrichment_disease=DOID:0060100!3.81e-12!3;DOID:4045!3.81e-12!3 | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.59e-17,3;DOID:4045,1.59e-17,3;DOID:0050686,2.87e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000344!1.75e-23!15;UBERON:0001242!1.11e-17!13;UBERON:0000060!1.11e-17!13;UBERON:0001262!1.11e-17!13;UBERON:0004786!1.11e-17!13;UBERON:0004923!5.02e-14!24;UBERON:0000160!5.17e-14!43;UBERON:0000331!1.85e-11!3;UBERON:0002116!1.85e-11!3;UBERON:0001204!1.85e-11!3;UBERON:0001168!1.85e-11!3;UBERON:0003350!9.11e-11!9;UBERON:0004808!9.11e-11!9;UBERON:0001277!9.11e-11!9;UBERON:0005409!1.72e-09!59;UBERON:0000485!9.43e-09!11;UBERON:0001962!3.79e-08!2;UBERON:0001961!3.79e-08!2;UBERON:0001744!3.79e-08!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,2.59e-24,13;UBERON:0001262,2.59e-24,13;UBERON:0004786,2.59e-24,13;UBERON:0003350,8.62e-23,9;UBERON:0004808,8.62e-23,9;UBERON:0001277,8.62e-23,9;UBERON:0000344,3.90e-21,15;UBERON:0000485,9.25e-19,11;UBERON:0004923,2.31e-13,24;UBERON:0000160,2.03e-10,31;UBERON:0000490,5.00e-07,66;UBERON:0005409,5.93e-07,47 | |||
|phase1_expression=0,0,0,0,0,1.00727563147134,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.91763712426868,0,0.430761996159075,0,0.380046838912748,1.76421090831952,0.665191531965914,0,0,0,7.22129049378186,5.48574329683025,6.73758875665818,2.09265815368454,0.7813353445238,2.09409497589519,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0.502670417600539,0,0,0,0.864552199498777,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,1.00727563147134,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,0.91763712426868,0,0.430761996159075,0,0.380046838912748,1.76421090831952,0.665191531965914,0,0,0,7.22129049378186,5.48574329683025,6.73758875665818,2.09265815368454,0.7813353445238,2.09409497589519,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0.502670417600539,0,0,0,0.864552199498777,0.199141273254367,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | ||
|short_description=p@chr14:80421229..80421237,+ | |short_description=p@chr14:80421229..80421237,+ | ||
}} | }} |
Latest revision as of 21:12, 4 August 2015
Short description: | p@chr14:80421229..80421237, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:80421229..80421237, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.17e-38 | 3 |
intestinal epithelial cell | 8.62e-23 | 9 |
epithelial cell of alimentary canal | 8.62e-23 | 9 |
endo-epithelial cell | 6.59e-14 | 15 |
endodermal cell | 1.48e-10 | 20 |
epithelial cell | 1.56e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 2.59e-24 | 13 |
wall of intestine | 2.59e-24 | 13 |
gastrointestinal system mucosa | 2.59e-24 | 13 |
epithelium of mucosa | 8.62e-23 | 9 |
gastrointestinal system epithelium | 8.62e-23 | 9 |
intestinal epithelium | 8.62e-23 | 9 |
mucosa | 3.90e-21 | 15 |
simple columnar epithelium | 9.25e-19 | 11 |
organ component layer | 2.31e-13 | 24 |
intestine | 2.03e-10 | 31 |
unilaminar epithelium | 5.00e-07 | 66 |
gastrointestinal system | 5.93e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.59e-17 | 3 |
muscle cancer | 1.59e-17 | 3 |
organ system cancer | 2.87e-09 | 6 |